Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013386.1 Olea europaea HOM05D004623 ORTHO05D005100 4.6e-244 847.8 550 100.0
Cc08_g16710 Coffea canephora HOM05D004623 ORTHO05D005100 4.8e-84 316.2 285 73.0
Migut.E00632 Erythranthe guttata HOM05D004623 ORTHO05D005100 3.1e-83 313.5 282 80.5
SGA_v2.0_scaffold127G33962 Striga asiatica HOM05D004623 ORTHO05D005100 4.1e-83 313.2 282 80.5
MSTRG.13716 Avicennia marina HOM05D004623 ORTHO05D005100 7.0e-83 312.4 286 79.0
Migut.E00624 Erythranthe guttata HOM05D004623 ORTHO05D005100 7.0e-83 312.4 282 80.1
Oeu041377.1 Olea europaea HOM05D004623 ORTHO05D005100 1.7e-81 307.8 300 78.7
SalBow1G2042 Salvia bowleyana HOM05D004623 ORTHO05D005100 2.9e-81 307.0 283 79.5
CANSAT21G1410 Cannabis sativa HOM05D004623 ORTHO05D005100 1.1e-80 305.1 299 73.2
Dinv12926 Davidia involucrata HOM05D004623 ORTHO05D005100 2.5e-80 303.9 292 77.4
Dinv16877 Davidia involucrata HOM05D004623 ORTHO05D005100 9.5e-80 302.0 291 68.7
Haze_09171 Corylus avellana HOM05D004623 ORTHO05D005100 2.1e-79 300.8 297 74.4
Nitab4.5_0004251g0030 Nicotiana tabacum HOM05D004623 ORTHO05D005100 1.0e-78 298.5 285 77.9
Gohir.D09G183500 Gossypium hirsutum HOM05D004623 ORTHO05D005100 1.4e-78 298.1 282 79.1
Gorai.006G205900 Gossypium raimondii HOM05D004623 ORTHO05D005100 1.4e-78 298.1 282 79.1
CsaV3_3G000890 Cucumis sativus L. HOM05D004623 ORTHO05D005100 1.8e-78 297.7 287 79.1
RcHm_v2.0_Chr7g0186861 Rosa chinensis HOM05D004623 ORTHO05D005100 1.8e-78 297.7 307 65.8
Gohir.A09G188600 Gossypium hirsutum HOM05D004623 ORTHO05D005100 5.2e-78 296.2 282 78.7
Manes.01G051700 Manihot esculenta HOM05D004623 ORTHO05D005100 5.2e-78 296.2 288 77.8
Nitab4.5_0007063g0040 Nicotiana tabacum HOM05D004623 ORTHO05D005100 5.2e-78 296.2 285 77.2
PGR031G2083 Punica granatum HOM05D004623 ORTHO05D005100 5.2e-78 296.2 286 69.9
TWI81G0490 Tripterygium wilfordii HOM05D004623 ORTHO05D005100 5.2e-78 296.2 291 76.3
CAN.G567.85 Capsicum annuum HOM05D004623 ORTHO05D005100 6.8e-78 295.8 285 76.8
ClCG10G000820 Citrullus lanatus HOM05D004623 ORTHO05D005100 8.9e-78 295.4 287 69.3
Ca_09948_v3 Cicer arietinum L. HOM05D004623 ORTHO05D005100 1.2e-77 295.0 282 69.9
CSS0032200 Camellia sinensis var. sinensis HOM05D004623 ORTHO05D005100 2.0e-77 294.3 287 77.4
Cfa011928 Carpinus fangiana HOM05D004623 ORTHO05D005100 2.6e-77 293.9 303 75.2
MD14G1126200 Malus domestica HOM05D004623 ORTHO05D005100 2.6e-77 293.9 286 67.5
Thecc.03G221500 Theobroma cacao HOM05D004623 ORTHO05D005100 2.6e-77 293.9 281 79.0
Rhsim02G0251800 Rhododendron simsii HOM05D004623 ORTHO05D005100 3.4e-77 293.5 326 58.0
FAN04G2529 Fragaria x ananassa HOM05D004623 ORTHO05D005100 4.4e-77 293.1 280 60.4
Sopen08g031290 Solanum pennellii HOM05D004623 ORTHO05D005100 5.7e-77 292.7 289 75.4
Aqoxy7G00024 Aquilegia oxysepala HOM05D004623 ORTHO05D005100 7.5e-77 292.4 286 77.3
Solyc08g083070.3 Solanum lycopersicum HOM05D004623 ORTHO05D005100 7.5e-77 292.4 289 75.4
Medtr1g077850 Medicago truncatula HOM05D004623 ORTHO05D005100 9.8e-77 292.0 282 69.1
Glyma.20G217500 Glycine max HOM05D004623 ORTHO05D005100 1.3e-76 291.6 285 67.4
Psat6g053240 Pisum sativum HOM05D004623 ORTHO05D005100 1.3e-76 291.6 282 68.8
QL02p028195 Quercus lobata HOM05D004623 ORTHO05D005100 1.3e-76 291.6 282 78.4
Eucgr.D01683 Eucalyptus grandis HOM05D004623 ORTHO05D005100 1.7e-76 291.2 440 51.1
Prupe.5G129200 Prunus persica HOM05D004623 ORTHO05D005100 1.7e-76 291.2 275 69.5
FAN13G2046 Fragaria x ananassa HOM05D004623 ORTHO05D005100 2.2e-76 290.8 273 76.9
Phvul.L005101 Phaseolus vulgaris HOM05D004623 ORTHO05D005100 2.2e-76 290.8 285 74.0
Atru.chr9.1891 Acer truncatum HOM05D004623 ORTHO05D005100 2.8e-76 290.4 282 68.4
Lj5g0020025 Lotus japonicus HOM05D004623 ORTHO05D005100 2.8e-76 290.4 282 68.4
Sed0004618 Sechium edule HOM05D004623 ORTHO05D005100 3.7e-76 290.0 293 66.6
FAN08G2217 Fragaria x ananassa HOM05D004623 ORTHO05D005100 4.9e-76 289.7 272 76.8
VMungo0720G2137 Vigna mungo HOM05D004623 ORTHO05D005100 6.3e-76 289.3 285 67.0
TPR.G34807 Trifolium pratense HOM05D004623 ORTHO05D005100 8.3e-76 288.9 282 68.4
CiPaw.11G112800 Carya illinoinensis HOM05D004623 ORTHO05D005100 1.1e-75 288.5 288 75.3
HanXRQChr03g0086131 Helianthus annuus HOM05D004623 ORTHO05D005100 1.1e-75 288.5 285 76.1
Manes.02G003100 Manihot esculenta HOM05D004623 ORTHO05D005100 1.1e-75 288.5 292 74.7
arahy.Tifrunner.gnm1.ann1.6R22RC Arachis hypogaea HOM05D004623 ORTHO05D005100 1.4e-75 288.1 270 70.4
arahy.Tifrunner.gnm1.ann1.CHU5UJ Arachis hypogaea HOM05D004623 ORTHO05D005100 1.4e-75 288.1 270 77.0
COL.COLO4_10792 Corchorus olitorius HOM05D004623 ORTHO05D005100 1.8e-75 287.7 281 77.2
FvH4_5g10960 Fragaria vesca HOM05D004623 ORTHO05D005100 1.8e-75 287.7 273 76.2
CiPaw.12G077700 Carya illinoinensis HOM05D004623 ORTHO05D005100 2.4e-75 287.3 292 70.2
FAN18G3535 Fragaria x ananassa HOM05D004623 ORTHO05D005100 2.4e-75 287.3 272 76.5
Lalb_Chr21g0311621 Lupinus albus HOM05D004623 ORTHO05D005100 9.2e-75 285.4 287 66.6
Gohir.A08G110100 Gossypium hirsutum HOM05D004623 ORTHO05D005100 1.6e-74 284.6 281 78.3
Duzib205G1161 Durio zibethinus HOM05D004623 ORTHO05D005100 2.0e-74 284.3 309 65.4
Lj2A157G52 Lonicera japonica HOM05D004623 ORTHO05D005100 2.7e-74 283.9 291 73.2
PSO063G4918 Papaver somniferum HOM05D004623 ORTHO05D005100 5.9e-74 282.7 287 66.2
Gohir.D08G123000 Gossypium hirsutum HOM05D004623 ORTHO05D005100 1.0e-73 282.0 287 76.0
Ciclev10019829m.g Citrus clementina HOM05D004623 ORTHO05D005100 1.3e-73 281.6 286 75.2
Hund11352 Selenicereus undatus HOM05D004623 ORTHO05D005100 2.3e-73 280.8 291 67.4
Sabra03G0106400 Salix brachista HOM05D004623 ORTHO05D005100 3.9e-73 280.0 306 72.5
unitig_62.g23647 Utricularia gibba HOM05D004623 ORTHO05D005100 6.6e-73 279.3 282 76.2
TWI15G0843 Tripterygium wilfordii HOM05D004623 ORTHO05D005100 8.6e-73 278.9 291 74.2
Aa31LG9G240 Aethionema arabicum HOM05D004623 ORTHO05D005100 1.1e-72 278.5 288 63.9
Nn1g00375 Nelumbo nucifera HOM05D004623 ORTHO05D005100 1.1e-72 278.5 287 73.2
Potri.003G146200 Populus trichocarpa HOM05D004623 ORTHO05D005100 2.5e-72 277.3 272 77.6
PSO782G3970 Papaver somniferum HOM05D004623 ORTHO05D005100 3.3e-72 276.9 283 66.8
Sp7g00180 Schrenkiella parvula HOM05D004623 ORTHO05D005100 4.3e-72 276.6 288 72.9
TAR375G0778 Trochodendron aralioides HOM05D004623 ORTHO05D005100 5.6e-72 276.2 290 74.5
AT5G41950 Arabidopsis thaliana HOM05D004623 ORTHO05D005100 7.3e-72 275.8 288 72.2
CDE09G0653 Ceratophyllum demersum HOM05D004623 ORTHO05D005100 7.3e-72 275.8 283 65.4
CARHR212610 Cardamine hirsuta HOM05D004623 ORTHO05D005100 1.2e-71 275.0 288 73.3
AUR62007050 Chenopodium quinoa HOM05D004623 ORTHO05D005100 1.2e-71 275.0 275 65.8
BcaB06g27683 Brassica carinata HOM05D004623 ORTHO05D005100 4.7e-71 273.1 280 72.1
TAR629G1871 Trochodendron aralioides HOM05D004623 ORTHO05D005100 4.7e-71 273.1 286 74.5
Thhalv10027708m.g Eutrema salsugineum HOM05D004623 ORTHO05D005100 6.1e-71 272.7 288 72.9
Carub.0007s3343 Capsella rubella HOM05D004623 ORTHO05D005100 8.0e-71 272.3 288 72.6
GSVIVG01019647001 Vitis vinifera HOM05D004623 ORTHO05D005100 8.0e-71 272.3 287 65.9
ATR0620G132 Amborella trichopoda HOM05D004623 ORTHO05D005100 5.2e-70 269.6 270 67.0
Cpa.g.sc175.24 Carica papaya HOM05D004623 ORTHO05D005100 5.2e-70 269.6 287 72.8
MELO3C013775.2 Cucumis melo HOM05D004623 ORTHO05D005100 5.2e-70 269.6 344 51.7
Lsat_1_v5_gn_3_14141 Lactuca sativa HOM05D004623 ORTHO05D005100 5.2e-70 269.6 301 69.4
DCAR_006543 Daucus carota HOM05D004623 ORTHO05D005100 6.8e-70 269.2 315 61.9
THA.LOC104823625 Tarenaya hassleriana HOM05D004623 ORTHO05D005100 6.8e-70 269.2 280 73.6
Hma1.2p1_0456F.1_g156590 Hydrangea macrophylla HOM05D004623 ORTHO05D005100 8.9e-70 268.9 284 64.8
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 2.6e-69 267.3 280 72.9
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 2.6e-69 267.3 280 72.9
BcaC02g08901 Brassica carinata HOM05D004623 ORTHO05D005100 4.4e-69 266.5 280 72.9
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 4.4e-69 266.5 280 72.9
BolC4t26520H Brassica oleracea HOM05D004623 ORTHO05D005100 4.4e-69 266.5 280 72.9
Gorai.004G129800 Gossypium raimondii HOM05D004623 ORTHO05D005100 4.4e-69 266.5 313 61.3
Zm00001eb043430 Zea mays HOM05D004623 ORTHO05D005100 4.4e-69 266.5 285 64.9
Os03g0113800 Oryza sativa ssp. japonica HOM05D004623 ORTHO05D005100 5.8e-69 266.2 284 64.1
HanXRQChr06g0166801 Helianthus annuus HOM05D004623 ORTHO05D005100 1.7e-68 264.6 292 70.2
Lj8A201G75 Lonicera japonica HOM05D004623 ORTHO05D005100 1.7e-68 264.6 291 62.9
SEGI_26605 Sequoiadendron giganteum HOM05D004623 ORTHO05D005100 1.7e-68 264.6 292 71.2
AL7G47270 Arabidopsis lyrata HOM05D004623 ORTHO05D005100 2.2e-68 264.2 288 71.5
vmacro11504 Vaccinium macrocarpon HOM05D004623 ORTHO05D005100 3.7e-68 263.5 254 62.2
Gohir.A02G098100 Gossypium hirsutum HOM05D004623 ORTHO05D005100 1.1e-67 261.9 287 72.1
Actinidia22205 Actinidia chinensis HOM05D004623 ORTHO05D005100 2.4e-67 260.8 302 61.6
Gohir.D03G085500 Gossypium hirsutum HOM05D004623 ORTHO05D005100 2.4e-67 260.8 307 68.4
Zm00001eb220090 Zea mays HOM05D004623 ORTHO05D005100 2.4e-67 260.8 290 63.4
Gorai.003G076800 Gossypium raimondii HOM05D004623 ORTHO05D005100 4.1e-67 260.0 287 71.8
MBI12_g13717_MAGBIO Magnolia biondii HOM05D004623 ORTHO05D005100 9.2e-67 258.8 250 75.2
MD06G1118100 Malus domestica HOM05D004623 ORTHO05D005100 1.3e-65 255.0 244 63.9
Sc22g0004710 Simmondsia chinensis HOM05D004623 ORTHO05D005100 5.6e-64 249.6 293 69.6
ECA246G3914 Erigeron canadensis HOM05D004623 ORTHO05D005100 1.6e-63 248.1 298 67.4
TWI15G1120 Tripterygium wilfordii HOM05D004623 ORTHO05D005100 2.1e-63 247.7 286 54.9
Mapoly0068s0096 Marchantia polymorpha HOM05D004623 ORTHO05D005100 1.2e-61 241.9 269 69.5
Glyma.10G172800 Glycine max HOM05D004623 ORTHO05D005100 4.4e-61 240.0 291 59.8
ECA240G2146 Erigeron canadensis HOM05D004623 ORTHO05D005100 7.0e-59 232.6 286 67.1
Os10g0518300 Oryza sativa ssp. japonica HOM05D004623 ORTHO05D005100 6.0e-58 229.6 285 60.4
Lsat_1_v5_gn_6_82240 Lactuca sativa HOM05D004623 ORTHO05D005100 5.1e-57 226.5 292 66.8
AUR62019914 Chenopodium quinoa HOM05D004623 ORTHO05D005100 1.1e-56 225.3 291 66.0
Lalb_Chr02g0149581 Lupinus albus HOM05D004623 ORTHO05D005100 1.5e-56 224.9 287 66.6
HanXRQChr17g0534721 Helianthus annuus HOM05D004623 ORTHO05D005100 2.5e-56 224.2 268 70.1
EL10Ac5g12433 Beta vulgaris HOM05D004623 ORTHO05D005100 1.1e-54 218.8 267 58.4
AagrBONN_evm.TU.Sc2ySwM_344.2453 Anthoceros agrestis HOM05D004623 ORTHO05D005100 5.2e-54 216.5 270 63.0
Duzib068G0531 Durio zibethinus HOM05D004623 ORTHO05D005100 1.1e-51 208.8 226 77.4
Peaxi162Scf00074g00026 Petunia axillaris HOM05D004623 ORTHO05D005100 6.8e-46 189.5 307 44.6
HPP92_007396 Vanilla planifolia HOM05D004623 ORTHO05D005100 4.2e-43 180.3 221 61.5
CBR_g24226 Chara braunii HOM05D004623 ORTHO05D005100 3.5e-42 177.2 304 54.3
Pp3c1_15130 Physcomitrium patens HOM05D004623 ORTHO05D005100 5.1e-41 173.3 289 56.7
SMO134G0154 Selaginella moellendorffii HOM05D004623 ORTHO05D005100 9.6e-32 142.5 168 50.0
SEGI_12617 Sequoiadendron giganteum HOM05D004623 ORTHO05D005100 5.3e-30 136.7 143 56.6
HanXRQChr05g0133491 Helianthus annuus HOM05D004623 ORTHO05D005100 1.6e-26 125.2 83 75.9
Pp3c2_21950 Physcomitrium patens HOM05D004623 ORTHO05D005100 9.6e-24 115.9 229 39.3
BolC6t37215H Brassica oleracea HOM05D004623 ORTHO05D005100 1.1e-22 112.5 126 53.2
Oeu041376.1 Olea europaea HOM05D004623 ORTHO05D005100 4.6e-18 97.1 135 47.4
TPR.G39353 Trifolium pratense HOM05D004623 ORTHO05D005100 3.0e-17 94.4 55 81.8
Actinidia15203 Actinidia chinensis HOM05D004623 ORTHO05D005100 8.2e-15 86.3 71 69.0
Actinidia19830 Actinidia chinensis HOM05D004623 ORTHO05D005100 6.9e-14 83.2 52 80.8
MCO14G177 Micromonas commoda HOM05D004623 ORTHO05D005100 3.2e-11 74.3 287 26.1
MD08G1234800 Malus domestica HOM05D008315 ORTHO05D009452 1.3e-09 68.9 57 64.9
Lsat_1_v5_gn_1_84960 Lactuca sativa HOM05D004623 ORTHO05D005100 1.5e-08 65.5 90 45.6
C06p20370 Brassica napus HOM05D004623 ORTHO05D005100 1.3e-07 62.4 42 71.4


User provided reference genes

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