Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 2.5e-160 568.9 325 100.0
Oeu042839.1 Olea europaea HOM05D007467 ORTHO05D009441 1.4e-118 430.3 327 79.8
MSTRG.13707 Avicennia marina HOM05D007467 ORTHO05D009441 1.6e-82 310.5 354 61.9
QL02p027667 Quercus lobata HOM05D007467 ORTHO05D009441 2.7e-82 309.7 361 57.1
Duzib205G1912 Durio zibethinus HOM05D007467 ORTHO05D009441 4.6e-82 308.9 345 57.1
Duzib084G1076 Durio zibethinus HOM05D007467 ORTHO05D009441 1.5e-80 303.9 338 54.1
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 1.6e-79 300.4 340 59.4
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 1.4e-78 297.4 335 58.2
Prupe.5G131500 Prunus persica HOM05D007467 ORTHO05D009441 1.5e-77 293.9 363 54.5
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 1.9e-75 287.0 347 55.6
Sabra01G0059300 Salix brachista HOM05D007467 ORTHO05D009441 4.1e-75 285.8 350 56.0
Potri.001G082600 Populus trichocarpa HOM05D007467 ORTHO05D009441 1.6e-74 283.9 345 56.8
Manes.02G001700 Manihot esculenta HOM05D007467 ORTHO05D009441 1.1e-72 277.7 330 50.9
CAN.G567.94 Capsicum annuum HOM05D007467 ORTHO05D009441 4.3e-72 275.8 340 56.5
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 9.6e-72 274.6 334 54.5
Sabra03G0107500 Salix brachista HOM05D007467 ORTHO05D009441 3.6e-71 272.7 339 54.0
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 6.2e-71 271.9 343 56.6
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 2.6e-69 266.5 331 47.7
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 3.8e-68 262.7 313 60.7
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 3.8e-68 262.7 313 60.7
FAN04G1879 Fragaria x ananassa HOM05D007467 ORTHO05D009441 8.4e-68 261.5 311 59.8
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 1.9e-67 260.4 351 54.1
FAN13G1608 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.9e-67 260.4 309 59.2
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 1.9e-67 260.4 309 57.3
FAN08G2920 Fragaria x ananassa HOM05D007467 ORTHO05D009441 4.2e-67 259.2 310 59.7
TAR629G1879 Trochodendron aralioides HOM05D007467 ORTHO05D009441 1.2e-66 257.7 319 56.1
Dinv18747 Davidia involucrata HOM05D007467 ORTHO05D009441 3.5e-66 256.1 294 60.2
PGSC0003DMG400012234 Solanum tuberosum HOM05D007467 ORTHO05D009441 1.0e-65 254.6 332 52.4
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 1.5e-64 250.8 348 54.3
Atru.chr9.1852 Acer truncatum HOM05D007467 ORTHO05D009441 1.9e-64 250.4 357 52.9
DCAR_006558 Daucus carota HOM05D007467 ORTHO05D009441 5.6e-64 248.8 335 48.4
HanXRQChr07g0192371 Helianthus annuus HOM05D007467 ORTHO05D009441 4.0e-62 242.7 312 55.4
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 6.9e-62 241.9 303 48.8
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 5.8e-61 238.8 303 48.5
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 1.7e-60 237.3 299 48.8
Cc08_g16860 Coffea canephora HOM05D007467 ORTHO05D009441 2.2e-60 236.9 320 54.4
Lsat_1_v5_gn_6_10100 Lactuca sativa HOM05D007467 ORTHO05D009441 2.2e-60 236.9 326 46.6
TAR636G1420 Trochodendron aralioides HOM05D007467 ORTHO05D009441 2.2e-60 236.9 317 47.3
Nn1g00417 Nelumbo nucifera HOM05D007467 ORTHO05D009441 2.9e-60 236.5 312 47.4
CANSAT21G0614 Cannabis sativa HOM05D007467 ORTHO05D009441 1.0e-57 228.0 338 53.0
Lj2P155T22 Lonicera japonica HOM05D007467 ORTHO05D009441 3.0e-57 226.5 315 54.3
Hma1.2p1_0456F.1_g156740 Hydrangea macrophylla HOM05D007467 ORTHO05D009441 5.1e-57 225.7 288 55.9
TWI60G0745 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 8.7e-57 224.9 345 50.4
ECA233G1457 Erigeron canadensis HOM05D007467 ORTHO05D009441 2.5e-56 223.4 342 50.9
Rhsim02G0253000 Rhododendron simsii HOM05D007467 ORTHO05D009441 2.0e-53 213.8 250 60.8
vmacro11497 Vaccinium macrocarpon HOM05D007467 ORTHO05D009441 4.5e-53 212.6 260 59.2
TWI15G0957 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 9.9e-53 211.5 348 44.0
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 2.9e-52 209.9 249 62.2
Potri.003G147900 Populus trichocarpa HOM05D007467 ORTHO05D009441 3.8e-52 209.5 261 58.2
Aqoxy7G00009 Aquilegia oxysepala HOM05D007467 ORTHO05D009441 6.4e-52 208.8 325 51.7
GSVIVG01019666001 Vitis vinifera HOM05D007467 ORTHO05D009441 5.5e-51 205.7 244 59.8
Nn3g18852 Nelumbo nucifera HOM05D007467 ORTHO05D009441 1.3e-49 201.1 289 51.2
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 3.0e-49 199.9 249 58.6
Solyc08g083220.1 Solanum lycopersicum HOM05D007467 ORTHO05D009441 6.7e-49 198.7 315 49.5
Sopen08g031410 Solanum pennellii HOM05D007467 ORTHO05D009441 1.1e-48 198.0 311 49.5
COL.COLO4_10812 Corchorus olitorius HOM05D007467 ORTHO05D009441 2.1e-47 193.7 244 50.0
Gohir.A09G188250 Gossypium hirsutum HOM05D007467 ORTHO05D009441 2.1e-47 193.7 284 52.5
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 4.8e-47 192.6 287 51.2
Eucgr.E01052 Eucalyptus grandis HOM05D007467 ORTHO05D009441 8.1e-47 191.8 396 44.7
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.4e-46 191.0 287 50.9
PGR042G1595 Punica granatum HOM05D007467 ORTHO05D009441 1.4e-46 191.0 345 48.7
CiPaw.11G111200 Carya illinoinensis HOM05D007467 ORTHO05D009441 3.4e-45 186.4 241 57.7
SGA_v2.0_scaffold267G46175 Striga asiatica HOM05D007467 ORTHO05D009441 1.0e-44 184.9 336 45.8
Aa31LG2G1740 Aethionema arabicum HOM05D007467 ORTHO05D009441 1.3e-44 184.5 316 47.2
CARHR046220 Cardamine hirsuta HOM05D007467 ORTHO05D009441 1.8e-38 164.1 307 38.1
PSO782G5165 Papaver somniferum HOM05D007467 ORTHO05D009441 4.1e-38 162.9 322 45.7
MBI12_g21574_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 1.2e-37 161.4 324 44.4
PSO478G5135 Papaver somniferum HOM05D007467 ORTHO05D009441 1.5e-37 161.0 326 41.1
MBI04_g15581_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 2.0e-37 160.6 263 39.9
MBI04_g43054_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 1.0e-36 158.3 239 41.4
BcaC04g22507 Brassica carinata HOM05D007467 ORTHO05D009441 3.8e-36 156.4 313 41.9
Sed0003485 Sechium edule HOM05D007467 ORTHO05D009441 1.4e-35 154.5 293 46.4
Carub.0002s0004 Capsella rubella HOM05D007467 ORTHO05D009441 7.9e-34 148.7 323 41.8
Thhalv10023631m.g Eutrema salsugineum HOM05D007467 ORTHO05D009441 1.8e-33 147.5 307 36.8
Sp2g00870 Schrenkiella parvula HOM05D007467 ORTHO05D009441 3.0e-33 146.7 323 41.5
CsaV3_5G001620 Cucumis sativus L. HOM05D007467 ORTHO05D009441 2.5e-32 143.7 328 42.7
MELO3C005789.2 Cucumis melo HOM05D007467 ORTHO05D009441 1.3e-31 141.4 317 42.9
Oeu022032.1 Olea europaea HOM05D007467 ORTHO05D009441 2.8e-31 140.2 175 51.4
A09p15270 Brassica napus HOM05D007467 ORTHO05D009441 6.3e-31 139.0 322 39.4
BraA09t37173Z Brassica rapa HOM05D007467 ORTHO05D009441 6.3e-31 139.0 322 39.4
ClCG01G001480 Citrullus lanatus HOM05D007467 ORTHO05D009441 1.1e-30 138.3 251 49.8
C09p18550 Brassica napus HOM05D007467 ORTHO05D009441 2.4e-30 137.1 313 39.3
BolC9t54751H Brassica oleracea HOM05D007467 ORTHO05D009441 2.4e-30 137.1 313 39.3
THA.LOC104823626 Tarenaya hassleriana HOM05D007467 ORTHO05D009441 4.5e-29 132.9 323 40.6
CDE02G3312 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 1.6e-26 124.4 286 35.3
AT1G64690 Arabidopsis thaliana HOM05D007467 ORTHO05D009441 2.1e-26 124.0 303 40.6
AL2G10070 Arabidopsis lyrata HOM05D007467 ORTHO05D009441 1.1e-24 118.2 303 39.3
BcaB07g31413 Brassica carinata HOM05D007467 ORTHO05D009441 5.7e-24 115.9 322 37.6
PGSC0003DMG400013732 Solanum tuberosum HOM05D007467 ORTHO05D009441 4.1e-22 109.8 147 48.3
AUR62007067 Chenopodium quinoa HOM05D007467 ORTHO05D009441 6.9e-22 109.0 260 36.9
Actinidia22211 Actinidia chinensis HOM05D007467 ORTHO05D009441 7.7e-21 105.5 74 71.6
AUR62019932 Chenopodium quinoa HOM05D007467 ORTHO05D009441 2.9e-20 103.6 246 36.2
Zm00001eb023700 Zea mays HOM05D007467 ORTHO05D009441 7.2e-19 99.0 307 36.8
EL10Ac5g12411 Beta vulgaris HOM05D007467 ORTHO05D009441 2.7e-18 97.1 204 37.7
ATR0579G156 Amborella trichopoda HOM05D007467 ORTHO05D009441 9.7e-16 88.6 307 27.4
Ah.12g053280 Amaranthus hybridus HOM05D007467 ORTHO05D009441 4.8e-15 86.3 359 29.8
ClCG00G001110 Citrullus lanatus HOM05D007467 ORTHO05D009441 1.2e-13 81.6 139 56.8
Sed0003279 Sechium edule HOM05D002166 ORTHO05D002634 4.7e-10 69.7 239 28.0
CDE11G0649 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 3.0e-09 67.0 171 32.7
Os10g0562600 Oryza sativa ssp. japonica HOM05D007467 ORTHO05D009441 4.0e-09 66.6 181 30.9
Sed0003496 Sechium edule HOM05D002166 ORTHO05D002634 9.7e-08 62.0 214 29.4
BcaB07g31547 Brassica carinata HOM05D007467 ORTHO05D009441 3.7e-07 60.1 191 29.8
Gorai.009G398800 Gossypium raimondii HOM05D002319 ORTHO05D002374 7.0e-06 55.8 239 28.9
CARHR191240 Cardamine hirsuta HOM05D002319 ORTHO05D002374 9.1e-06 55.5 148 44.6
Gohir.D04G095900 Gossypium hirsutum HOM05D002319 ORTHO05D002374 9.1e-06 55.5 239 28.9
Zm00001eb298080 Zea mays HOM05D002166 ORTHO05D002634 9.1e-06 55.5 128 37.5


User provided reference genes

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