Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013283.1 Olea europaea HOM05D004032 ORTHO05D004462 1.7e-111 406.0 204 100.0
Oeu031171.1 Olea europaea HOM05D004032 ORTHO05D004462 4.1e-81 305.1 206 78.6
Oeu031172.1 Olea europaea HOM05D004032 ORTHO05D004462 1.3e-79 300.1 206 77.7
Oeu054187.1 Olea europaea HOM05D004032 ORTHO05D004462 5.1e-47 191.8 204 54.4
GSVIVG01000145001 Vitis vinifera HOM05D004032 ORTHO05D004462 2.1e-45 186.4 214 55.1
Dinv30069 Davidia involucrata HOM05D004032 ORTHO05D004462 2.8e-45 186.0 212 54.2
QL06p039858 Quercus lobata HOM05D004032 ORTHO05D004462 3.7e-45 185.7 209 51.7
MSTRG.2833 Avicennia marina HOM05D004032 ORTHO05D004462 1.4e-44 183.7 208 56.7
TAR376G0432 Trochodendron aralioides HOM05D004032 ORTHO05D004462 2.2e-42 176.4 215 53.0
Cc07_g06860 Coffea canephora HOM05D004032 ORTHO05D004462 6.5e-42 174.9 222 49.5
Nitab4.5_0000868g0010 Nicotiana tabacum HOM05D004032 ORTHO05D004462 3.2e-41 172.6 210 52.9
Haze_15306 Corylus avellana HOM05D004032 ORTHO05D004462 4.2e-41 172.2 218 50.5
DCAR_025783 Daucus carota HOM05D004032 ORTHO05D004462 4.2e-41 172.2 223 49.3
DCAR_010831 Daucus carota HOM05D004032 ORTHO05D004462 9.3e-41 171.0 212 51.4
CSS0002661 Camellia sinensis var. sinensis HOM05D004032 ORTHO05D004462 1.8e-39 166.8 217 49.8
CSS0031607 Camellia sinensis var. sinensis HOM05D004032 ORTHO05D004462 5.1e-39 165.2 217 49.8
Duzib187G1312 Durio zibethinus HOM05D004032 ORTHO05D004462 5.1e-39 165.2 212 49.1
Glyma.05G103900 Glycine max HOM05D004032 ORTHO05D004462 5.1e-39 165.2 214 49.5
Aqoxy6G02719 Aquilegia oxysepala HOM05D004032 ORTHO05D004462 6.7e-39 164.9 222 48.6
VMungo0251G2494 Vigna mungo HOM05D004032 ORTHO05D004462 8.7e-39 164.5 214 50.0
Potri.007G053300 Populus trichocarpa HOM05D004032 ORTHO05D004462 1.1e-38 164.1 218 46.8
Hma1.2p1_0942F.1_g239820 Hydrangea macrophylla HOM05D004032 ORTHO05D004462 1.9e-38 163.3 214 49.1
Phvul.003G236700 Phaseolus vulgaris HOM05D004032 ORTHO05D004462 3.3e-38 162.5 214 49.5
Oeu040591.1 Olea europaea HOM05D004032 ORTHO05D004462 7.4e-38 161.4 204 51.0
Oeu040592.1 Olea europaea HOM05D004032 ORTHO05D004462 7.4e-38 161.4 204 51.0
Glyma.17G163400 Glycine max HOM05D004032 ORTHO05D004462 2.8e-37 159.5 211 47.9
Manes.13G113400 Manihot esculenta HOM05D004032 ORTHO05D004462 2.8e-37 159.5 216 48.6
Thecc.01G069300 Theobroma cacao HOM05D004032 ORTHO05D004462 8.2e-37 157.9 216 46.8
MSTRG.23688 Avicennia marina HOM05D004032 ORTHO05D004462 1.4e-36 157.1 211 50.7
CiPaw.01G006700 Carya illinoinensis HOM05D004032 ORTHO05D004462 3.1e-36 156.0 222 45.9
CiPaw.02G004200 Carya illinoinensis HOM05D004032 ORTHO05D004462 4.1e-36 155.6 221 45.2
Gorai.007G221700 Gossypium raimondii HOM05D004032 ORTHO05D004462 1.5e-35 153.7 213 45.1
Peaxi162Scf00264g00213 Petunia axillaris HOM05D004032 ORTHO05D004462 1.5e-35 153.7 235 47.2
Manes.12G111200 Manihot esculenta HOM05D004032 ORTHO05D004462 2.0e-35 153.3 221 47.1
Duzib147G1493 Durio zibethinus HOM05D004032 ORTHO05D004462 3.4e-35 152.5 216 45.8
TPR.G23878 Trifolium pratense HOM05D004032 ORTHO05D004462 3.4e-35 152.5 212 44.3
Gohir.A11G216800 Gossypium hirsutum HOM05D004032 ORTHO05D004462 5.9e-35 151.8 213 45.1
Gohir.D11G206500 Gossypium hirsutum HOM05D004032 ORTHO05D004462 7.7e-35 151.4 213 44.6
Prupe.6G223500 Prunus persica HOM05D004032 ORTHO05D004462 7.7e-35 151.4 229 48.5
Psat4g083520 Pisum sativum HOM05D004032 ORTHO05D004462 2.2e-34 149.8 216 44.9
TAR628G1371 Trochodendron aralioides HOM05D004032 ORTHO05D004462 5.0e-34 148.7 198 47.0
Glyma.11G049700 Glycine max HOM05D004032 ORTHO05D004462 8.5e-34 147.9 218 44.5
Potri.005G145800 Populus trichocarpa HOM05D004032 ORTHO05D004462 8.5e-34 147.9 216 43.5
Lj4g0009335 Lotus japonicus HOM05D004032 ORTHO05D004462 1.1e-33 147.5 208 46.2
Solyc02g092590.3 Solanum lycopersicum HOM05D004032 ORTHO05D004462 1.9e-33 146.7 220 46.8
Sopen02g037160 Solanum pennellii HOM05D004032 ORTHO05D004462 5.5e-33 145.2 223 46.2
Rhsim10G0102400 Rhododendron simsii HOM05D004032 ORTHO05D004462 1.2e-32 144.1 208 47.6
Medtr4g095440 Medicago truncatula HOM05D004032 ORTHO05D004462 2.1e-32 143.3 213 45.1
TWI09G0556 Tripterygium wilfordii HOM05D004032 ORTHO05D004462 2.1e-32 143.3 208 47.6
Dinv26906 Davidia involucrata HOM05D004032 ORTHO05D004462 1.0e-31 141.0 214 46.3
CAN.G1075.18 Capsicum annuum HOM05D004032 ORTHO05D004462 1.4e-31 140.6 228 44.7
Sabra05G0116500 Salix brachista HOM05D004032 ORTHO05D004462 1.8e-31 140.2 209 44.5
Cpa.g.sc6.44 Carica papaya HOM05D004032 ORTHO05D004462 2.3e-31 139.8 216 43.1
PGSC0003DMG400024938 Solanum tuberosum HOM05D004032 ORTHO05D004462 3.0e-31 139.4 219 46.1
FAN28G1831 Fragaria x ananassa HOM05D004032 ORTHO05D004462 8.8e-31 137.9 209 45.9
RcHm_v2.0_Chr2g0107481 Rosa chinensis HOM05D004032 ORTHO05D004462 8.8e-31 137.9 209 45.5
SGA_v2.0_scaffold15G07422 Striga asiatica HOM05D004032 ORTHO05D004462 2.0e-30 136.7 206 47.6
COL.COLO4_11544 Corchorus olitorius HOM05D004032 ORTHO05D004462 7.4e-30 134.8 211 44.5
CSS0022714 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004462 1.3e-29 134.0 187 46.5
Glyma.01G192400 Glycine max HOM05D004032 ORTHO05D004462 2.2e-29 133.3 218 41.3
Ciclev10026503m.g Citrus clementina HOM05D004032 ORTHO05D004462 3.7e-29 132.5 214 44.4
FvH4_1g17290 Fragaria vesca HOM05D004032 ORTHO05D004462 4.8e-29 132.1 206 45.6
FAN19G2997 Fragaria x ananassa HOM05D004032 ORTHO05D004462 4.8e-29 132.1 206 45.6
CSS0026387 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004462 1.1e-28 131.0 191 45.5
Actinidia16438 Actinidia chinensis HOM05D004032 ORTHO05D004462 3.1e-28 129.4 207 44.4
Migut.H00365 Erythranthe guttata HOM05D004032 ORTHO05D004462 2.0e-27 126.7 218 45.4
vmacro17992 Vaccinium macrocarpon HOM05D004032 ORTHO05D004462 2.0e-27 126.7 210 41.0
vmacro05391 Vaccinium macrocarpon HOM05D004032 ORTHO05D004462 4.5e-27 125.6 210 45.2
Lalb_Chr05g0213571 Lupinus albus HOM05D004032 ORTHO05D004462 5.9e-27 125.2 218 41.7
MD15G1293900 Malus domestica HOM05D004032 ORTHO05D004462 1.0e-26 124.4 238 41.6
Lalb_Chr16g0389141 Lupinus albus HOM05D004032 ORTHO05D004462 1.3e-26 124.0 211 40.8
HanXRQChr12g0373191 Helianthus annuus HOM05D004032 ORTHO05D004462 5.0e-26 122.1 211 41.2
HanXRQChr11g0322451 Helianthus annuus HOM05D004032 ORTHO05D004462 6.5e-26 121.7 206 39.8
TWI53G0135 Tripterygium wilfordii HOM05D004032 ORTHO05D004462 6.5e-26 121.7 208 41.8
Nn1g04611 Nelumbo nucifera HOM05D004032 ORTHO05D004462 1.4e-25 120.6 199 45.2
MD02G1182600 Malus domestica HOM05D004032 ORTHO05D004462 2.5e-25 119.8 237 40.5
Lsat_1_v5_gn_4_162340 Lactuca sativa HOM05D004032 ORTHO05D004462 4.2e-25 119.0 210 42.4
Lalb_Chr09g0334051 Lupinus albus HOM05D004032 ORTHO05D004462 4.2e-25 119.0 202 40.1
Rhsim08G0095200 Rhododendron simsii HOM05D004032 ORTHO05D004462 3.6e-24 115.9 210 41.4
SalBow6G2131 Salvia bowleyana HOM05D004032 ORTHO05D004462 1.0e-23 114.4 203 40.9
FAN26G2221 Fragaria x ananassa HOM05D004032 ORTHO05D004462 1.8e-23 113.6 206 40.3
PSO675G6353 Papaver somniferum HOM05D004032 ORTHO05D004462 2.3e-23 113.2 210 39.0
HPP92_023674 Vanilla planifolia HOM05D004032 ORTHO05D004462 3.0e-23 112.8 208 41.8
Gohir.A02G153200 Gossypium hirsutum HOM05D004032 ORTHO05D004462 6.7e-23 111.7 214 39.3
Hund13934 Selenicereus undatus HOM05D004032 ORTHO05D004462 6.7e-23 111.7 222 38.3
HPP92_023691 Vanilla planifolia HOM05D004032 ORTHO05D004462 6.7e-23 111.7 208 41.8
Actinidia36441 Actinidia chinensis HOM05D004032 ORTHO05D004462 1.1e-22 110.9 207 40.1
PGR004G0357 Punica granatum HOM05D004032 ORTHO05D004462 1.1e-22 110.9 204 40.2
PSO541G5875 Papaver somniferum HOM05D004032 ORTHO05D004462 1.5e-22 110.5 219 40.2
Eucgr.I00716 Eucalyptus grandis HOM05D004032 ORTHO05D004462 2.0e-22 110.2 216 42.1
Gohir.D03G027200 Gossypium hirsutum HOM05D004032 ORTHO05D004462 2.0e-22 110.2 224 38.8
Actinidia21232 Actinidia chinensis HOM05D004032 ORTHO05D004462 2.6e-22 109.8 160 45.6
CsaV3_6G043920 Cucumis sativus L. HOM05D004032 ORTHO05D004462 3.3e-22 109.4 215 41.9
Gorai.003G028900 Gossypium raimondii HOM05D004032 ORTHO05D004462 3.3e-22 109.4 214 38.8
VMungo1215G3265 Vigna mungo HOM05D004032 ORTHO05D004462 4.4e-22 109.0 170 44.7
ClCG01G017390 Citrullus lanatus HOM05D004032 ORTHO05D004462 5.7e-22 108.6 222 39.6
Sed0022630 Sechium edule HOM05D004032 ORTHO05D004462 1.7e-21 107.1 214 40.2
Actinidia11994 Actinidia chinensis HOM05D004032 ORTHO05D004462 2.8e-21 106.3 134 50.7
FAN23G1545 Fragaria x ananassa HOM05D004032 ORTHO05D004462 6.3e-21 105.1 206 39.3
Glyma.15G185500 Glycine max HOM05D004032 ORTHO05D004462 6.3e-21 105.1 203 38.9
TWI73G0275 Tripterygium wilfordii HOM05D004032 ORTHO05D004462 6.3e-21 105.1 203 41.4
Gohir.A10G090100 Gossypium hirsutum HOM05D004032 ORTHO05D004462 1.4e-20 104.0 203 36.0
Hma1.2p1_0017F.1_g012150 Hydrangea macrophylla HOM05D004032 ORTHO05D004462 4.5e-19 99.0 209 36.4
Gohir.D10G098000 Gossypium hirsutum HOM05D004032 ORTHO05D004462 1.3e-18 97.4 203 35.0
Nn5g30527 Nelumbo nucifera HOM05D004032 ORTHO05D004462 1.3e-18 97.4 125 50.4
Phvul.002G012400 Phaseolus vulgaris HOM05D004032 ORTHO05D004462 2.2e-18 96.7 172 42.4
Ah.02g125580 Amaranthus hybridus HOM05D004032 ORTHO05D004462 3.8e-18 95.9 215 38.6
Lj2g0017817 Lotus japonicus HOM05D004032 ORTHO05D004462 5.0e-18 95.5 211 39.8
Gorai.011G107600 Gossypium raimondii HOM05D004032 ORTHO05D004462 1.5e-17 94.0 203 34.0
Lj7A88G34 Lonicera japonica HOM05D004032 ORTHO05D004462 3.2e-17 92.8 195 38.5
Atru.chr3.163 Acer truncatum HOM05D004032 ORTHO05D004462 4.2e-17 92.4 208 34.6
Lj4A160G62 Lonicera japonica HOM05D004032 ORTHO05D004462 4.2e-17 92.4 137 45.3
arahy.Tifrunner.gnm1.ann1.4VG7J5 Arachis hypogaea HOM05D004032 ORTHO05D004462 2.1e-16 90.1 244 34.4
Nitab4.5_0000651g0050 Nicotiana tabacum HOM05D004032 ORTHO05D004462 2.1e-16 90.1 157 42.0
Sed0024584 Sechium edule HOM05D004032 ORTHO05D004462 4.7e-16 89.0 198 35.9
ECA232G3054 Erigeron canadensis HOM05D004032 ORTHO05D004462 6.1e-16 88.6 136 46.3
THA.LOC104827558 Tarenaya hassleriana HOM05D004032 ORTHO05D004462 6.7e-15 85.1 117 42.7
Hund16386 Selenicereus undatus HOM05D004032 ORTHO05D004462 1.2e-14 84.3 225 35.1
Atru.chr3.192 Acer truncatum HOM05D004032 ORTHO05D004462 2.0e-14 83.6 213 32.4
Aa31LG1G15950 Aethionema arabicum HOM05D004032 ORTHO05D004462 3.3e-14 82.8 114 45.6
Nitab4.5_0006689g0040 Nicotiana tabacum HOM05D004032 ORTHO05D004462 3.3e-14 82.8 188 34.6
Sp2g29270 Schrenkiella parvula HOM05D004032 ORTHO05D004462 5.7e-14 82.0 117 41.0
SGA_v2.0_scaffold72G24091 Striga asiatica HOM05D004032 ORTHO05D004462 5.7e-14 82.0 113 48.7
AT5G67390 Arabidopsis thaliana HOM05D004032 ORTHO05D004462 9.7e-14 81.3 112 44.6
CANSAT01G2482 Cannabis sativa HOM05D004032 ORTHO05D004462 9.7e-14 81.3 242 35.5
CARHR280210 Cardamine hirsuta HOM05D004032 ORTHO05D004462 9.7e-14 81.3 112 44.6
BcaB04g20056 Brassica carinata HOM05D004032 ORTHO05D004462 1.3e-13 80.9 205 33.7
C07p24210 Brassica napus HOM05D004032 ORTHO05D004462 1.3e-13 80.9 210 32.9
BolC7t42948H Brassica oleracea HOM05D004032 ORTHO05D004462 1.3e-13 80.9 210 32.9
EL10Ac6g15646 Beta vulgaris HOM05D004032 ORTHO05D004462 2.2e-13 80.1 258 34.9
Thhalv10005011m.g Eutrema salsugineum HOM05D004032 ORTHO05D004462 2.2e-13 80.1 136 41.9
AL8G43930 Arabidopsis lyrata HOM05D004032 ORTHO05D004462 2.8e-13 79.7 112 44.6
BcaB02g09927 Brassica carinata HOM05D004032 ORTHO05D004462 2.8e-13 79.7 112 45.5
arahy.Tifrunner.gnm1.ann1.L7L2H1 Arachis hypogaea HOM05D004032 ORTHO05D004462 3.7e-13 79.3 215 33.5
Carub.0008s2709 Capsella rubella HOM05D004032 ORTHO05D004462 3.7e-13 79.3 118 44.9
Lsat_1_v5_gn_2_83781 Lactuca sativa HOM05D004032 ORTHO05D004462 8.2e-13 78.2 195 32.3
Sed0016234 Sechium edule HOM05D004032 ORTHO05D004462 8.2e-13 78.2 202 32.2
ATR0030G044 Amborella trichopoda HOM05D004032 ORTHO05D004462 1.1e-12 77.8 229 32.3
arahy.Tifrunner.gnm1.ann1.7C4JLW Arachis hypogaea HOM05D004032 ORTHO05D004462 1.1e-12 77.8 215 33.5
A07p16510 Brassica napus HOM05D004032 ORTHO05D004462 1.1e-12 77.8 112 45.5
BraA07t29375Z Brassica rapa HOM05D004032 ORTHO05D004462 1.1e-12 77.8 112 45.5
BcaC06g34822 Brassica carinata HOM05D004032 ORTHO05D004462 2.4e-12 76.6 112 45.5
BcaC03g18375 Brassica carinata HOM05D004032 ORTHO05D004462 5.3e-12 75.5 169 35.5
BcaC04g23221 Brassica carinata HOM05D004032 ORTHO05D004462 5.3e-12 75.5 149 37.6
C02p64510 Brassica napus HOM05D004032 ORTHO05D004462 5.3e-12 75.5 169 35.5
BolC2t12515H Brassica oleracea HOM05D004032 ORTHO05D004462 5.3e-12 75.5 169 35.5
BolC9t53989H Brassica oleracea HOM05D004032 ORTHO05D004462 5.3e-12 75.5 149 37.6
Sc16g0000080 Simmondsia chinensis HOM05D004032 ORTHO05D004462 7.0e-12 75.1 190 37.4
A09p09370 Brassica napus HOM05D004032 ORTHO05D004462 1.2e-11 74.3 150 40.7
C09p10940 Brassica napus HOM05D004032 ORTHO05D004462 1.2e-11 74.3 149 38.9
A02p44240 Brassica napus HOM05D004032 ORTHO05D004462 1.6e-11 73.9 170 34.7
BraA02t09348Z Brassica rapa HOM05D004032 ORTHO05D004462 1.6e-11 73.9 170 34.7
THA.LOC104819252 Tarenaya hassleriana HOM05D004032 ORTHO05D004462 1.6e-11 73.9 151 37.7
BraA09t36588Z Brassica rapa HOM05D004032 ORTHO05D004462 2.7e-11 73.2 149 38.3
ECA238G1032 Erigeron canadensis HOM05D004032 ORTHO05D004462 3.5e-11 72.8 158 40.5
CDE02G2979 Ceratophyllum demersum HOM05D000039 ORTHO05D000870 5.9e-11 72.0 203 33.5
THA.LOC104821233 Tarenaya hassleriana HOM05D004032 ORTHO05D004462 7.7e-11 71.6 126 40.5
arahy.Tifrunner.gnm1.ann1.NPYP4Z Arachis hypogaea HOM05D004032 ORTHO05D004462 2.9e-10 69.7 71 53.5
Os03g0442900 Oryza sativa ssp. japonica HOM05D004032 ORTHO05D004462 2.5e-09 66.6 205 30.2
Os03g0762100 Oryza sativa ssp. japonica HOM05D004032 ORTHO05D004462 7.2e-09 65.1 51 60.8
HanXRQChr14g0441881 Helianthus annuus HOM05D004032 ORTHO05D004462 9.4e-09 64.7 160 36.9
Os12g0580600 Oryza sativa ssp. japonica HOM05D004032 ORTHO05D004462 9.4e-09 64.7 148 35.1
Os03g0604566 Oryza sativa ssp. japonica HOM05D004032 ORTHO05D004462 1.2e-08 64.3 90 46.7
ClCG02G012390 Citrullus lanatus HOM05D004032 ORTHO05D004462 1.6e-08 63.9 218 30.7
CsaV3_2G016520 Cucumis sativus L. HOM05D004032 ORTHO05D004462 3.6e-08 62.8 212 29.2
MELO3C020862.2 Cucumis melo HOM05D004032 ORTHO05D004462 1.4e-07 60.8 214 28.5
Zm00001eb214280 Zea mays HOM05D004032 ORTHO05D004462 5.2e-07 58.9 47 61.7
Manes.14G158020 Manihot esculenta HOM05D007665 ORTHO05D008293 1.5e-06 57.4 237 27.4
Zm00001eb134870 Zea mays HOM05D004032 ORTHO05D004462 1.5e-06 57.4 99 42.4
Zm00001eb058240 Zea mays HOM05D004032 ORTHO05D004462 2.0e-06 57.0 79 41.8
HPP92_018370 Vanilla planifolia HOM05D007665 ORTHO05D008293 2.6e-06 56.6 44 61.4
Potri.018G090000 Populus trichocarpa HOM05D007665 ORTHO05D008293 7.5e-06 55.1 251 27.9
Manes.06G022200 Manihot esculenta HOM05D007665 ORTHO05D008293 9.8e-06 54.7 216 28.2


User provided reference genes

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