Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013256.1 Olea europaea HOM05D000119 ORTHO05D026960 1.1e-89 333.6 211 100.0
MSTRG.23713 Avicennia marina HOM05D000119 ORTHO05D000054 1.5e-30 137.1 227 44.5
Nitab4.5_0002578g0010 Nicotiana tabacum HOM05D000119 ORTHO05D000054 1.7e-24 117.1 224 42.4
PGSC0003DMG400024983 Solanum tuberosum HOM05D000119 ORTHO05D000054 2.8e-24 116.3 225 46.2
Sopen02g037490 Solanum pennellii HOM05D000119 ORTHO05D000054 3.1e-23 112.8 220 42.3
Solyc02g092930.1 Solanum lycopersicum HOM05D000119 ORTHO05D000054 9.1e-23 111.3 222 43.7
Migut.H00392 Erythranthe guttata HOM05D000119 ORTHO05D000054 1.2e-22 110.9 209 47.4
CAN.G370.10 Capsicum annuum HOM05D000119 ORTHO05D000054 2.5e-20 103.2 222 44.6
Actinidia12018 Actinidia chinensis HOM05D000119 ORTHO05D000054 2.1e-19 100.1 211 36.0
arahy.Tifrunner.gnm1.ann1.HL1WF3 Arachis hypogaea HOM05D000119 ORTHO05D026960 2.1e-19 100.1 217 40.6
SGA_v2.0_scaffold15G07370 Striga asiatica HOM05D000119 ORTHO05D000054 2.1e-19 100.1 208 45.7
arahy.Tifrunner.gnm1.ann1.CPTS0I Arachis hypogaea HOM05D000119 ORTHO05D026960 2.7e-19 99.8 217 40.6
Cc07_g06450 Coffea canephora HOM05D000119 ORTHO05D000054 2.7e-19 99.8 222 45.0
MSTRG.3444 Avicennia marina HOM05D000119 ORTHO05D000054 2.3e-18 96.7 211 38.4
Dinv30034 Davidia involucrata HOM05D000119 ORTHO05D000054 2.3e-18 96.7 211 37.0
SGA_v2.0_scaffold143G35787 Striga asiatica HOM05D000119 ORTHO05D000054 1.5e-17 94.0 215 47.9
Cpa.g.sc6.98 Carica papaya HOM05D000119 ORTHO05D000054 1.7e-16 90.5 212 39.2
CSS0005646 Camellia sinensis var. sinensis HOM05D000119 ORTHO05D000054 6.3e-16 88.6 211 36.5
Hma1.2p1_0239F.1_g100050 Hydrangea macrophylla HOM05D000119 ORTHO05D000054 8.2e-16 88.2 211 36.0
Lsat_1_v5_gn_3_88960 Lactuca sativa HOM05D000119 ORTHO05D000054 8.2e-16 88.2 230 37.0
Manes.13G118400 Manihot esculenta HOM05D000119 ORTHO05D000054 1.1e-15 87.8 213 42.7
TAR381G0837 Trochodendron aralioides HOM05D000119 ORTHO05D000054 1.1e-15 87.8 213 36.2
TAR625G0796 Trochodendron aralioides HOM05D000119 ORTHO05D000054 2.4e-15 86.7 213 35.7
Ca_24738_v3 Cicer arietinum L. HOM05D000119 ORTHO05D000054 4.1e-15 85.9 215 39.1
Nn1g04702 Nelumbo nucifera HOM05D000119 ORTHO05D000054 4.1e-15 85.9 223 33.2
Lj2g0003417 Lotus japonicus HOM05D000119 ORTHO05D000054 2.0e-14 83.6 209 34.0
Dinv26867 Davidia involucrata HOM05D000119 ORTHO05D000054 2.6e-14 83.2 215 35.3
Peaxi162Scf00945g00023 Petunia axillaris HOM05D000119 ORTHO05D000054 7.7e-14 81.6 219 41.1
Psat0s2134g0040 Pisum sativum HOM05D000119 ORTHO05D000054 2.9e-13 79.7 216 34.7
Rhsim10G0112500 Rhododendron simsii HOM05D000119 ORTHO05D000054 2.9e-13 79.7 211 36.0
CiPaw.15G051600 Carya illinoinensis HOM05D000119 ORTHO05D000054 1.5e-12 77.4 213 36.6
MSTRG.15369 Avicennia marina HOM05D000119 ORTHO05D000054 9.4e-12 74.7 161 38.5
TPR.G26869 Trifolium pratense HOM05D000119 ORTHO05D000054 9.4e-12 74.7 230 33.0
VMungo1215G0669 Vigna mungo HOM05D000119 ORTHO05D000054 1.6e-11 73.9 209 34.0
ECA246G0316 Erigeron canadensis HOM05D000119 ORTHO05D000054 2.1e-11 73.6 215 33.5
Duzib041G0806 Durio zibethinus HOM05D000119 ORTHO05D000054 2.7e-11 73.2 212 33.5
Duzib093G1047 Durio zibethinus HOM05D000119 ORTHO05D000054 2.7e-11 73.2 218 32.6
Glyma.01G190100 Glycine max HOM05D000119 ORTHO05D000054 3.6e-11 72.8 213 37.6
Nitab4.5_0001373g0030 Nicotiana tabacum HOM05D000119 ORTHO05D000054 4.7e-11 72.4 65 61.5
TWI53G0631 Tripterygium wilfordii HOM05D000119 ORTHO05D000054 4.7e-11 72.4 214 33.6
Duzib116G0959 Durio zibethinus HOM05D000119 ORTHO05D000054 1.0e-10 71.2 220 31.8
HanXRQChr14g0449721 Helianthus annuus HOM05D000119 ORTHO05D000054 1.0e-10 71.2 165 35.2
Actinidia36462 Actinidia chinensis HOM05D000119 ORTHO05D000054 2.3e-10 70.1 158 36.7
Prupe.1G430000 Prunus persica HOM05D000119 ORTHO05D000054 2.3e-10 70.1 211 31.3
Dinv35919 Davidia involucrata HOM05D000119 ORTHO05D000054 8.8e-10 68.2 161 37.3
FAN26G0551 Fragaria x ananassa HOM05D000119 ORTHO05D000054 8.8e-10 68.2 218 30.3
ECA238G2921 Erigeron canadensis HOM05D000119 ORTHO05D000054 1.2e-09 67.8 161 37.9
RcHm_v2.0_Chr2g0106671 Rosa chinensis HOM05D000119 ORTHO05D000054 2.0e-09 67.0 223 32.3
Aqoxy5G01144 Aquilegia oxysepala HOM05D000119 ORTHO05D000054 2.6e-09 66.6 220 32.7
Cpa.g.sc21.145 Carica papaya HOM05D000119 ORTHO05D000054 3.4e-09 66.2 216 32.4
Lalb_Chr09g0323401 Lupinus albus HOM05D000119 ORTHO05D000054 3.4e-09 66.2 209 30.1
CDE04G2409 Ceratophyllum demersum HOM05D000119 ORTHO05D000054 4.4e-09 65.9 163 36.2
Eucgr.H02226 Eucalyptus grandis HOM05D000119 ORTHO05D000054 5.7e-09 65.5 210 32.4
MELO3C024799.2 Cucumis melo HOM05D000119 ORTHO05D000054 7.5e-09 65.1 204 31.4
FvH4_1g16770 Fragaria vesca HOM05D000119 ORTHO05D000054 7.5e-09 65.1 219 29.2
Manes.18G042000 Manihot esculenta HOM05D000119 ORTHO05D000054 7.5e-09 65.1 214 32.7
CiPaw.02G006000 Carya illinoinensis HOM05D000119 ORTHO05D000054 9.8e-09 64.7 216 30.1
PSO210G3810 Papaver somniferum HOM05D000119 ORTHO05D000054 9.8e-09 64.7 220 30.9
Thecc.01G063400 Theobroma cacao HOM05D000119 ORTHO05D000054 9.8e-09 64.7 223 29.1
CiPaw.01G012800 Carya illinoinensis HOM05D000119 ORTHO05D000054 1.3e-08 64.3 213 32.9
ClCG02G008090 Citrullus lanatus HOM05D000119 ORTHO05D000054 1.3e-08 64.3 209 33.0
HanXRQChr02g0037561 Helianthus annuus HOM05D000119 ORTHO05D000054 1.7e-08 63.9 228 35.5
FAN19G1055 Fragaria x ananassa HOM05D000119 ORTHO05D000054 2.8e-08 63.2 219 29.2
Nitab4.5_0001984g0040 Nicotiana tabacum HOM05D000119 ORTHO05D000054 3.7e-08 62.8 214 30.8
CAN.G1891.3 Capsicum annuum HOM05D000119 ORTHO05D000054 4.8e-08 62.4 68 55.9
TWI09G1597 Tripterygium wilfordii HOM05D000119 ORTHO05D000054 4.8e-08 62.4 214 30.8
PSO170G3872 Papaver somniferum HOM05D000119 ORTHO05D000054 6.3e-08 62.0 219 30.1
Atru.chr13.764 Acer truncatum HOM05D000119 ORTHO05D000054 8.3e-08 61.6 215 30.7
Cfa018051 Carpinus fangiana HOM05D000119 ORTHO05D000054 8.3e-08 61.6 213 31.5
Lalb_Chr05g0213451 Lupinus albus HOM05D000119 ORTHO05D000054 8.3e-08 61.6 210 31.0
Aqoxy6G02870 Aquilegia oxysepala HOM05D000119 ORTHO05D000054 1.1e-07 61.2 212 34.0
CsaV3_2G035520 Cucumis sativus L. HOM05D000119 ORTHO05D000054 1.1e-07 61.2 161 34.2
PGR102G0225 Punica granatum HOM05D000119 ORTHO05D000054 1.1e-07 61.2 192 32.3
Atru.chr3.250 Acer truncatum HOM05D000119 ORTHO05D000054 1.4e-07 60.8 212 38.2
Gorai.007G218100 Gossypium raimondii HOM05D000119 ORTHO05D000054 1.4e-07 60.8 218 29.8
MD15G1288600 Malus domestica HOM05D000119 ORTHO05D000054 1.4e-07 60.8 220 30.5
Nitab4.5_0005060g0020 Nicotiana tabacum HOM05D000119 ORTHO05D000054 1.4e-07 60.8 211 30.3
DCAR_025760 Daucus carota HOM05D000119 ORTHO05D000054 1.8e-07 60.5 213 31.5
Gohir.A11G220200 Gossypium hirsutum HOM05D000119 ORTHO05D000054 3.1e-07 59.7 218 29.8
Manes.12G108500 Manihot esculenta HOM05D000119 ORTHO05D000054 3.1e-07 59.7 219 34.7
GSVIVG01000219001 Vitis vinifera HOM05D000119 ORTHO05D026960 3.1e-07 59.7 97 38.1
CAN.G1621.5 Capsicum annuum HOM05D000119 ORTHO05D000054 4.1e-07 59.3 214 29.4
FAN23G2859 Fragaria x ananassa HOM05D000119 ORTHO05D000054 4.1e-07 59.3 216 31.5
Medtr5g016510 Medicago truncatula HOM05D000119 ORTHO05D000054 4.1e-07 59.3 101 39.6
PSO541G1845 Papaver somniferum HOM05D000119 ORTHO05D000054 4.1e-07 59.3 221 34.8
Dinv39266 Davidia involucrata HOM05D000119 ORTHO05D000054 5.4e-07 58.9 165 35.2
FAN28G2496 Fragaria x ananassa HOM05D000119 ORTHO05D000054 5.4e-07 58.9 222 30.6
Potri.014G022500 Populus trichocarpa HOM05D000119 ORTHO05D000054 5.4e-07 58.9 213 30.0
Ciclev10001979m.g Citrus clementina HOM05D000119 ORTHO05D000054 7.0e-07 58.5 215 29.8
Hma1.2p1_0240F.1_g100270 Hydrangea macrophylla HOM05D000119 ORTHO05D000054 7.0e-07 58.5 218 31.7
DCAR_010853 Daucus carota HOM05D000119 ORTHO05D000054 1.2e-06 57.8 166 33.1
FAN28G0389 Fragaria x ananassa HOM05D000119 ORTHO05D000054 1.2e-06 57.8 222 30.2
Lsat_1_v5_gn_2_85541 Lactuca sativa HOM05D000119 ORTHO05D000054 1.2e-06 57.8 164 31.7
Solyc04g078420.1 Solanum lycopersicum HOM05D000119 ORTHO05D000054 1.2e-06 57.8 222 30.6
PGSC0003DMG400003316 Solanum tuberosum HOM05D000119 ORTHO05D000054 1.2e-06 57.8 214 34.1
MD02G1179000 Malus domestica HOM05D000119 ORTHO05D000054 1.6e-06 57.4 215 33.0
Ciclev10026107m.g Citrus clementina HOM05D000119 ORTHO05D000054 2.0e-06 57.0 163 35.0
Duzib147G0851 Durio zibethinus HOM05D000119 ORTHO05D000054 2.0e-06 57.0 219 27.9
Prupe.6G229000 Prunus persica HOM05D000119 ORTHO05D000054 2.0e-06 57.0 75 45.3
Sopen04g032030 Solanum pennellii HOM05D000119 ORTHO05D000054 2.0e-06 57.0 215 30.7
Duzib187G0650 Durio zibethinus HOM05D000119 ORTHO05D000054 2.7e-06 56.6 214 28.0
Gorai.007G055600 Gossypium raimondii HOM05D000119 ORTHO05D000054 4.5e-06 55.8 223 27.8
GSVIVG01009424001 Vitis vinifera HOM05D000119 ORTHO05D000054 4.5e-06 55.8 213 28.6
Gohir.A11G047600 Gossypium hirsutum HOM05D000119 ORTHO05D000054 5.9e-06 55.5 223 27.4
Gohir.D11G051200 Gossypium hirsutum HOM05D000119 ORTHO05D000054 5.9e-06 55.5 223 27.4
Sabra05G0113700 Salix brachista HOM05D000119 ORTHO05D000054 5.9e-06 55.5 211 31.8
Migut.C00524 Erythranthe guttata HOM05D000119 ORTHO05D000054 7.7e-06 55.1 213 30.0
Gohir.A05G206200 Gossypium hirsutum HOM05D000119 ORTHO05D000054 7.7e-06 55.1 214 29.9


User provided reference genes

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