Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013194.1 Olea europaea HOM05D004221 ORTHO05D004998 3.0e-20 100.9 52 100.0
Migut.E00685 Erythranthe guttata HOM05D004221 ORTHO05D004998 1.1e-17 92.4 52 88.5
Actinidia04331 Actinidia chinensis HOM05D004221 ORTHO05D004998 2.4e-17 91.3 49 91.8
MSTRG.13679 Avicennia marina HOM05D004221 ORTHO05D004998 1.2e-16 89.0 52 84.6
CAN.G282.46 Capsicum annuum HOM05D004221 ORTHO05D004998 1.2e-16 89.0 52 82.7
Actinidia04067 Actinidia chinensis HOM05D004221 ORTHO05D004998 1.6e-16 88.6 48 91.7
Nitab4.5_0013217g0020 Nicotiana tabacum HOM05D004221 ORTHO05D004998 2.7e-16 87.8 49 85.7
PGSC0003DMG400016397 Solanum tuberosum HOM05D004221 ORTHO05D004998 2.7e-16 87.8 52 82.7
ECA232G2799 Erigeron canadensis HOM05D004221 ORTHO05D004998 3.5e-16 87.4 49 85.7
Hma1.2p1_0513F.1_g169420 Hydrangea macrophylla HOM05D004221 ORTHO05D004998 5.9e-16 86.7 48 87.5
Peaxi162Scf00021g02223 Petunia axillaris HOM05D004221 ORTHO05D004998 5.9e-16 86.7 52 82.7
Solyc01g008270.3 Solanum lycopersicum HOM05D004221 ORTHO05D004998 1.0e-15 85.9 52 80.8
Sopen01g003790 Solanum pennellii HOM05D004221 ORTHO05D004998 1.0e-15 85.9 52 80.8
CANSAT78G1084 Cannabis sativa HOM05D004221 ORTHO05D004998 1.3e-15 85.5 49 83.7
Cfa008767 Carpinus fangiana HOM05D004221 ORTHO05D004998 1.7e-15 85.1 49 81.6
Nn3g18605 Nelumbo nucifera HOM05D004221 ORTHO05D004998 2.2e-15 84.7 49 81.6
CiPaw.06G062100 Carya illinoinensis HOM05D004221 ORTHO05D004998 2.9e-15 84.3 49 79.6
Eucgr.J00883 Eucalyptus grandis HOM05D004221 ORTHO05D004998 2.9e-15 84.3 49 81.6
PGR044G1895 Punica granatum HOM05D004221 ORTHO05D004998 2.9e-15 84.3 49 79.6
Potri.005G090100 Populus trichocarpa HOM05D004221 ORTHO05D004998 3.8e-15 84.0 49 79.6
Potri.007G074042 Populus trichocarpa HOM05D004221 ORTHO05D004998 3.8e-15 84.0 49 79.6
COL.COLO4_33086 Corchorus olitorius HOM05D004221 ORTHO05D004998 5.0e-15 83.6 49 77.6
Haze_11779 Corylus avellana HOM05D004221 ORTHO05D004998 5.0e-15 83.6 49 79.6
GSVIVG01026144001 Vitis vinifera HOM05D004221 ORTHO05D004998 6.5e-15 83.2 47 85.1
Lsat_1_v5_gn_4_64581 Lactuca sativa HOM05D004221 ORTHO05D004998 8.5e-15 82.8 48 83.3
Lalb_Chr06g0163921 Lupinus albus HOM05D004221 ORTHO05D004998 8.5e-15 82.8 49 77.6
Manes.11G108400 Manihot esculenta HOM05D004221 ORTHO05D004998 8.5e-15 82.8 49 75.5
THA.LOC104818379 Tarenaya hassleriana HOM05D004221 ORTHO05D004998 1.1e-14 82.4 48 83.3
Thecc.02G156600 Theobroma cacao HOM05D004221 ORTHO05D004998 1.1e-14 82.4 49 77.6
Ciclev10032992m.g Citrus clementina HOM05D004221 ORTHO05D004998 1.9e-14 81.6 49 79.6
Hund24383 Selenicereus undatus HOM05D004221 ORTHO05D004998 1.9e-14 81.6 48 81.2
THA.LOC104800677 Tarenaya hassleriana HOM05D004221 ORTHO05D004998 1.9e-14 81.6 48 81.2
Gohir.A01G012400 Gossypium hirsutum HOM05D004221 ORTHO05D004998 2.5e-14 81.3 49 77.6
Gohir.D01G013600 Gossypium hirsutum HOM05D004221 ORTHO05D004998 2.5e-14 81.3 49 77.6
Gorai.002G015400 Gossypium raimondii HOM05D004221 ORTHO05D004998 2.5e-14 81.3 49 77.6
TWI77G0364 Tripterygium wilfordii HOM05D004221 ORTHO05D004998 2.5e-14 81.3 49 79.6
Aqoxy3G04291 Aquilegia oxysepala HOM05D004221 ORTHO05D004998 3.2e-14 80.9 49 73.5
AUR62017728 Chenopodium quinoa HOM05D004221 ORTHO05D004998 3.2e-14 80.9 49 77.6
AUR62032953 Chenopodium quinoa HOM05D004221 ORTHO05D004998 3.2e-14 80.9 49 77.6
Medtr1g114500 Medicago truncatula HOM05D004221 ORTHO05D004998 4.2e-14 80.5 48 79.2
Os10g0488100 Oryza sativa ssp. japonica HOM05D004221 ORTHO05D004998 7.2e-14 79.7 49 75.5
TWI74G0522 Tripterygium wilfordii HOM05D004221 ORTHO05D004998 7.2e-14 79.7 49 75.5
Glyma.20G103300 Glycine max HOM05D004221 ORTHO05D004998 9.4e-14 79.3 48 77.1
TAR629G3528 Trochodendron aralioides HOM05D004221 ORTHO05D004998 9.4e-14 79.3 49 77.6
HPP92_005060 Vanilla planifolia HOM05D004221 ORTHO05D004998 9.4e-14 79.3 49 71.4
Zm00001eb045320 Zea mays HOM05D004221 ORTHO05D004998 9.4e-14 79.3 49 73.5
Ca_11255_v3 Cicer arietinum L. HOM05D004221 ORTHO05D004998 1.2e-13 79.0 48 77.1
Lj5g0004809 Lotus japonicus HOM05D004221 ORTHO05D004998 1.2e-13 79.0 48 77.1
Psat6g233960 Pisum sativum HOM05D004221 ORTHO05D004998 1.2e-13 79.0 48 77.1
Sc26g0002050 Simmondsia chinensis HOM05D004221 ORTHO05D004998 1.2e-13 79.0 48 77.1
HanXRQChr04g0111871 Helianthus annuus HOM05D004221 ORTHO05D004998 1.6e-13 78.6 48 79.2
MBI06_g27498_MAGBIO Magnolia biondii HOM05D004221 ORTHO05D004998 1.6e-13 78.6 48 72.9
TPR.G4058 Trifolium pratense HOM05D004221 ORTHO05D004998 1.6e-13 78.6 48 77.1
ATR0618G284 Amborella trichopoda HOM05D004221 ORTHO05D004998 2.1e-13 78.2 48 77.1
Phvul.007G014900 Phaseolus vulgaris HOM05D004221 ORTHO05D004998 2.1e-13 78.2 48 75.0
arahy.Tifrunner.gnm1.ann1.8BKN44 Arachis hypogaea HOM05D004221 ORTHO05D004998 2.7e-13 77.8 48 75.0
arahy.Tifrunner.gnm1.ann1.G8X8S8 Arachis hypogaea HOM05D004221 ORTHO05D004998 2.7e-13 77.8 48 75.0
arahy.Tifrunner.gnm1.ann1.VLL77W Arachis hypogaea HOM05D004221 ORTHO05D004998 2.7e-13 77.8 48 75.0
Prupe.1G348800 Prunus persica HOM05D004221 ORTHO05D004998 2.7e-13 77.8 49 73.5
RcHm_v2.0_Chr4g0446851 Rosa chinensis HOM05D004221 ORTHO05D004998 2.7e-13 77.8 49 73.5
TAR629G0713 Trochodendron aralioides HOM05D004221 ORTHO05D004998 2.7e-13 77.8 49 75.5
VMungo0720G0328 Vigna mungo HOM05D004221 ORTHO05D004998 2.7e-13 77.8 48 75.0
EL10Ac9g22978 Beta vulgaris HOM05D004221 ORTHO05D004998 3.6e-13 77.4 48 75.0
MD16G1003800 Malus domestica HOM05D004221 ORTHO05D004998 3.6e-13 77.4 48 75.0
Duzib132G0545 Durio zibethinus HOM05D004221 ORTHO05D004998 4.7e-13 77.0 49 71.4
Duzib132G0858 Durio zibethinus HOM05D004221 ORTHO05D004998 4.7e-13 77.0 49 71.4
FAN12G1261 Fragaria x ananassa HOM05D004221 ORTHO05D004998 4.7e-13 77.0 49 71.4
Glyma.10G286000 Glycine max HOM05D004221 ORTHO05D004998 4.7e-13 77.0 47 76.6
MD13G1003600 Malus domestica HOM05D004221 ORTHO05D004998 6.1e-13 76.6 48 75.0
CARHR190250 Cardamine hirsuta HOM05D004221 ORTHO05D004998 1.0e-12 75.9 47 74.5
PSO017G5121 Papaver somniferum HOM05D004221 ORTHO05D004998 1.0e-12 75.9 49 73.5
TAR371G0536 Trochodendron aralioides HOM05D004221 ORTHO05D004998 1.4e-12 75.5 45 80.0
Carub.0006s2106 Capsella rubella HOM05D004221 ORTHO05D004998 1.8e-12 75.1 48 70.8
FvH4_4g37090 Fragaria vesca HOM05D004221 ORTHO05D004998 1.8e-12 75.1 49 69.4
AT5G23290 Arabidopsis thaliana HOM05D004221 ORTHO05D004998 2.3e-12 74.7 47 72.3
CsaV3_5G020730 Cucumis sativus L. HOM05D004221 ORTHO05D004998 2.3e-12 74.7 47 70.2
PSO170G6579 Papaver somniferum HOM05D004221 ORTHO05D004998 3.0e-12 74.3 49 73.5
Aa31LG11G2750 Aethionema arabicum HOM05D004221 ORTHO05D004998 4.0e-12 73.9 47 70.2
FAN10G4155 Fragaria x ananassa HOM05D004221 ORTHO05D004998 5.2e-12 73.6 49 65.3
Sed0003164 Sechium edule HOM05D004221 ORTHO05D004998 5.2e-12 73.6 47 70.2
unitig_699.g19553 Utricularia gibba HOM05D004221 ORTHO05D004998 5.2e-12 73.6 47 72.3
FAN03G3278 Fragaria x ananassa HOM05D004221 ORTHO05D004998 6.8e-12 73.2 49 65.3
FAN10G1077 Fragaria x ananassa HOM05D004221 ORTHO05D004998 6.8e-12 73.2 49 65.3
FAN17G0592 Fragaria x ananassa HOM05D004221 ORTHO05D004998 6.8e-12 73.2 49 65.3
FAN17G2528 Fragaria x ananassa HOM05D004221 ORTHO05D004998 6.8e-12 73.2 49 65.3
FAN23G3078 Fragaria x ananassa HOM05D004221 ORTHO05D004998 6.8e-12 73.2 49 65.3
AL6G34550 Arabidopsis lyrata HOM05D004221 ORTHO05D004998 8.8e-12 72.8 47 70.2
Sp2g23860 Schrenkiella parvula HOM05D004221 ORTHO05D004998 1.2e-11 72.4 47 70.2
FAN15G1018 Fragaria x ananassa HOM05D004221 ORTHO05D004998 1.5e-11 72.0 49 65.3
FAN03G0273 Fragaria x ananassa HOM05D004221 ORTHO05D004998 2.0e-11 71.6 49 63.3
A09p07020 Brassica napus HOM05D004221 ORTHO05D004998 3.4e-11 70.9 47 66.0
C07p44270 Brassica napus HOM05D004221 ORTHO05D004998 3.4e-11 70.9 47 68.1
C09p07830 Brassica napus HOM05D004221 ORTHO05D004998 3.4e-11 70.9 47 66.0
BolC9t53699H Brassica oleracea HOM05D004221 ORTHO05D004998 3.4e-11 70.9 47 66.0
BraA09t36350Z Brassica rapa HOM05D004221 ORTHO05D004998 3.4e-11 70.9 47 66.0
BcaC04g23487 Brassica carinata HOM05D004221 ORTHO05D004998 4.4e-11 70.5 47 66.0
A06p34250 Brassica napus HOM05D004221 ORTHO05D004998 4.4e-11 70.5 47 66.0
BraA06t26357Z Brassica rapa HOM05D004221 ORTHO05D004998 4.4e-11 70.5 47 66.0
BolC7t44950H Brassica oleracea HOM05D004221 ORTHO05D004998 5.7e-11 70.1 46 67.4
FAN07G0046 Fragaria x ananassa HOM05D004221 ORTHO05D004998 5.7e-11 70.1 48 66.7
Thhalv10005074m.g Eutrema salsugineum HOM05D004221 ORTHO05D004998 7.5e-11 69.7 47 66.0
SEGI_18337 Sequoiadendron giganteum HOM05D004221 ORTHO05D004998 9.8e-11 69.3 47 68.1
SEGI_37490 Sequoiadendron giganteum HOM05D004221 ORTHO05D004998 2.8e-10 67.8 46 67.4
CDE04G0710 Ceratophyllum demersum HOM05D004221 ORTHO05D004998 4.8e-10 67.0 48 66.7
A02p41030 Brassica napus HOM05D004221 ORTHO05D004998 6.3e-10 66.6 47 63.8
CDE02G2963 Ceratophyllum demersum HOM05D004221 ORTHO05D004998 2.4e-09 64.7 48 62.5
Sabra05G0074200 Salix brachista HOM05D004221 ORTHO05D004998 2.0e-08 61.6 95 41.1
SMO114G0084 Selaginella moellendorffii HOM05D004221 ORTHO05D004998 2.0e-08 61.6 47 51.1
SGA_v2.0_scaffold256G45657 Striga asiatica HOM05D004221 ORTHO05D004998 2.0e-08 61.6 91 44.0
Sabra07G0062100 Salix brachista HOM05D004221 ORTHO05D004998 5.9e-08 60.1 98 39.8
BcaB04g19880 Brassica carinata HOM05D004221 ORTHO05D004998 7.7e-08 59.7 57 50.9
Mapoly0041s0007 Marchantia polymorpha HOM05D004221 ORTHO05D004998 1.0e-07 59.3 46 54.3
vmacro15987 Vaccinium macrocarpon HOM05D004221 ORTHO05D004998 1.3e-07 58.9 118 37.3
ClCG01G008100 Citrullus lanatus HOM05D004221 ORTHO05D004998 2.2e-07 58.2 89 40.4
Rhsim09G0069500 Rhododendron simsii HOM05D004221 ORTHO05D004998 5.0e-07 57.0 123 35.8
AagrBONN_evm.TU.Sc2ySwM_117.4013 Anthoceros agrestis HOM05D004221 ORTHO05D004998 4.2e-06 53.9 47 46.8
Pp3c1_32320 Physcomitrium patens HOM05D004221 ORTHO05D004998 5.5e-06 53.5 44 52.3


User provided reference genes

Program Settings