Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013075.1 Olea europaea HOM05D005005 ORTHO05D006178 2.6e-129 465.3 219 100.0
Oeu013069.1 Olea europaea HOM05D005005 ORTHO05D006178 1.0e-109 400.2 198 94.9
Dinv32010 Davidia involucrata HOM05D005005 ORTHO05D006178 5.5e-71 271.6 198 65.2
Sabra03G0145000 Salix brachista HOM05D005005 ORTHO05D006178 2.5e-68 262.7 198 66.2
TWI63G1294 Tripterygium wilfordii HOM05D005005 ORTHO05D006178 4.3e-68 261.9 198 64.1
Actinidia06222 Actinidia chinensis HOM05D005005 ORTHO05D006178 9.6e-68 260.8 198 61.1
Actinidia07969 Actinidia chinensis HOM05D005005 ORTHO05D006178 9.6e-68 260.8 198 61.6
CSS0003849 Camellia sinensis var. sinensis HOM05D005005 ORTHO05D006178 3.7e-67 258.8 198 62.1
Potri.001G030900 Populus trichocarpa HOM05D005005 ORTHO05D006178 1.8e-66 256.5 198 64.1
Hma1.2p1_1796F.1_g302710 Hydrangea macrophylla HOM05D005005 ORTHO05D006178 2.0e-65 253.1 200 60.5
Manes.04G156500 Manihot esculenta HOM05D005005 ORTHO05D006178 3.4e-65 252.3 198 62.1
Prupe.2G042700 Prunus persica HOM05D005005 ORTHO05D006178 3.4e-65 252.3 198 60.1
MSTRG.20501 Avicennia marina HOM05D005005 ORTHO05D006178 4.5e-65 251.9 198 61.6
Gohir.D10G197000 Gossypium hirsutum HOM05D005005 ORTHO05D006178 4.5e-65 251.9 195 60.5
Peaxi162Scf00220g00417 Petunia axillaris HOM05D005005 ORTHO05D006178 4.5e-65 251.9 198 61.6
Thecc.10G142900 Theobroma cacao HOM05D005005 ORTHO05D006178 5.8e-65 251.5 196 60.2
Oeu014630.2 Olea europaea HOM05D005005 ORTHO05D006178 7.6e-65 251.1 197 61.9
Lj7A493G34 Lonicera japonica HOM05D005005 ORTHO05D006178 1.7e-64 250.0 200 61.5
FAN01G1292 Fragaria x ananassa HOM05D005005 ORTHO05D006178 2.2e-64 249.6 198 60.6
Gohir.A10G189100 Gossypium hirsutum HOM05D005005 ORTHO05D006178 2.2e-64 249.6 195 60.0
Gorai.011G220200 Gossypium raimondii HOM05D005005 ORTHO05D006178 2.9e-64 249.2 195 60.0
COL.COLO4_20731 Corchorus olitorius HOM05D005005 ORTHO05D006178 4.9e-64 248.4 195 59.0
MD02G1278000 Malus domestica HOM05D005005 ORTHO05D006178 2.5e-63 246.1 200 61.0
RcHm_v2.0_Chr1g0326491 Rosa chinensis HOM05D005005 ORTHO05D006178 2.5e-63 246.1 200 58.5
MD07G1045900 Malus domestica HOM05D005005 ORTHO05D006178 3.2e-63 245.7 198 60.6
GSVIVG01036640001 Vitis vinifera HOM05D005005 ORTHO05D006178 3.2e-63 245.7 198 58.6
FAN10G2457 Fragaria x ananassa HOM05D005005 ORTHO05D006178 5.5e-63 245.0 198 59.1
Sabra01G0022200 Salix brachista HOM05D005005 ORTHO05D006178 7.1e-63 244.6 197 61.9
Cc09_g07690 Coffea canephora HOM05D005005 ORTHO05D006178 1.2e-62 243.8 193 57.5
Duzib128G0392 Durio zibethinus HOM05D005005 ORTHO05D006178 1.6e-62 243.4 196 58.7
FvH4_7g03700 Fragaria vesca HOM05D005005 ORTHO05D006178 1.6e-62 243.4 198 58.6
FAN06G0520 Fragaria x ananassa HOM05D005005 ORTHO05D006178 1.6e-62 243.4 198 58.6
Gohir.A06G174600 Gossypium hirsutum HOM05D005005 ORTHO05D006178 4.6e-62 241.9 196 59.2
Gohir.D06G184600 Gossypium hirsutum HOM05D005005 ORTHO05D006178 4.6e-62 241.9 196 58.7
Gorai.010G215900 Gossypium raimondii HOM05D005005 ORTHO05D006178 4.6e-62 241.9 196 58.7
Nitab4.5_0002838g0130 Nicotiana tabacum HOM05D005005 ORTHO05D006178 6.0e-62 241.5 198 60.1
Sopen01g040300 Solanum pennellii HOM05D005005 ORTHO05D006178 6.0e-62 241.5 198 60.6
FAN03G0125 Fragaria x ananassa HOM05D005005 ORTHO05D006178 7.9e-62 241.1 197 58.9
Manes.11G007250 Manihot esculenta HOM05D005005 ORTHO05D006178 7.9e-62 241.1 198 60.6
Potri.003G194300 Populus trichocarpa HOM05D005005 ORTHO05D006178 7.9e-62 241.1 198 62.6
CAN.G134.16 Capsicum annuum HOM05D005005 ORTHO05D006178 3.9e-61 238.8 198 60.6
PGSC0003DMG403003285 Solanum tuberosum HOM05D005005 ORTHO05D006178 6.7e-61 238.0 198 59.6
TWI38G1285 Tripterygium wilfordii HOM05D005005 ORTHO05D006178 1.1e-60 237.3 195 61.0
Haze_02996 Corylus avellana HOM05D005005 ORTHO05D006178 1.5e-60 236.9 202 56.9
Rhsim07G0069000 Rhododendron simsii HOM05D005005 ORTHO05D006178 1.5e-60 236.9 198 57.1
Solyc01g096570.3 Solanum lycopersicum HOM05D005005 ORTHO05D006178 1.5e-60 236.9 198 59.6
vmacro13768 Vaccinium macrocarpon HOM05D005005 ORTHO05D006178 1.5e-60 236.9 198 57.1
Cfa010948 Carpinus fangiana HOM05D005005 ORTHO05D006178 4.3e-60 235.3 198 57.6
Ciclev10001735m.g Citrus clementina HOM05D005005 ORTHO05D006178 7.4e-60 234.6 199 59.8
Lalb_Chr03g0032191 Lupinus albus HOM05D005005 ORTHO05D006178 4.8e-59 231.9 198 57.6
CiPaw.14G009200 Carya illinoinensis HOM05D005005 ORTHO05D006178 8.2e-59 231.1 198 57.6
Duzib106G1278 Durio zibethinus HOM05D005005 ORTHO05D006178 3.1e-58 229.2 196 56.1
Glyma.13G192200 Glycine max HOM05D005005 ORTHO05D006178 5.3e-58 228.4 198 56.6
Glyma.15G230500 Glycine max HOM05D005005 ORTHO05D006178 5.3e-58 228.4 198 56.1
SalBow5G3115 Salvia bowleyana HOM05D005005 ORTHO05D006178 9.0e-58 227.6 197 56.3
arahy.Tifrunner.gnm1.ann1.1L47SY Arachis hypogaea HOM05D005005 ORTHO05D006178 2.0e-57 226.5 198 56.1
arahy.Tifrunner.gnm1.ann1.HP7LLE Arachis hypogaea HOM05D005005 ORTHO05D006178 2.0e-57 226.5 198 56.1
TAR633G0536 Trochodendron aralioides HOM05D005005 ORTHO05D006178 7.6e-57 224.6 204 55.4
Phvul.011G201500 Phaseolus vulgaris HOM05D005005 ORTHO05D006178 2.2e-56 223.0 198 55.6
VMungo1127G1151 Vigna mungo HOM05D005005 ORTHO05D006178 2.2e-56 223.0 198 55.1
Nn7g36763 Nelumbo nucifera HOM05D005005 ORTHO05D006178 2.9e-56 222.6 206 54.9
QL04p021121 Quercus lobata HOM05D005005 ORTHO05D006178 6.5e-56 221.5 200 56.0
QL93p0049_0022 Quercus lobata HOM05D005005 ORTHO05D006178 6.5e-56 221.5 200 56.0
TPR.G8528 Trifolium pratense HOM05D005005 ORTHO05D006178 1.9e-55 219.9 198 55.6
Lalb_Chr19g0132951 Lupinus albus HOM05D005005 ORTHO05D006178 4.2e-55 218.8 198 54.5
ClCG08G010820 Citrullus lanatus HOM05D005005 ORTHO05D006178 2.7e-54 216.1 198 55.1
MSTRG.5076 Avicennia marina HOM05D005005 ORTHO05D006178 1.8e-53 213.4 195 57.4
ClCG08G002660 Citrullus lanatus HOM05D005005 ORTHO05D006178 2.3e-53 213.0 198 54.0
SalBow6G1153 Salvia bowleyana HOM05D005005 ORTHO05D006178 2.3e-53 213.0 198 56.1
MBI19_g20792_MAGBIO Magnolia biondii HOM05D005005 ORTHO05D006178 3.0e-53 212.6 203 53.2
Cpa.g.sc169.39 Carica papaya HOM05D005005 ORTHO05D006178 3.9e-53 212.2 171 60.2
THA.LOC104826755 Tarenaya hassleriana HOM05D005005 ORTHO05D006178 3.9e-53 212.2 197 51.8
SalBow6G1292 Salvia bowleyana HOM05D005005 ORTHO05D006178 5.1e-53 211.8 198 55.6
Lj3g0014782 Lotus japonicus HOM05D005005 ORTHO05D006178 6.7e-53 211.5 201 53.7
CsaV3_6G035720 Cucumis sativus L. HOM05D005005 ORTHO05D006178 1.5e-52 210.3 198 54.5
MELO3C011380.2 Cucumis melo HOM05D005005 ORTHO05D006178 9.7e-52 207.6 198 54.0
Migut.B01249 Erythranthe guttata HOM05D005005 ORTHO05D006178 9.7e-52 207.6 198 56.1
DCAR_025325 Daucus carota HOM05D005005 ORTHO05D006178 1.6e-51 206.8 198 55.1
Sed0024277 Sechium edule HOM05D005005 ORTHO05D006178 2.8e-51 206.1 197 53.3
Atru.chr3.3001 Acer truncatum HOM05D005005 ORTHO05D006178 2.0e-49 199.9 204 51.0
Aqoxy2G00413 Aquilegia oxysepala HOM05D005005 ORTHO05D006178 2.2e-48 196.4 198 53.0
Migut.N01858 Erythranthe guttata HOM05D005005 ORTHO05D006178 2.5e-47 193.0 199 54.3
Lsat_1_v5_gn_1_117920 Lactuca sativa HOM05D005005 ORTHO05D006178 3.2e-47 192.6 198 52.0
Ca_23977_v3 Cicer arietinum L. HOM05D005005 ORTHO05D006178 6.1e-46 188.3 201 48.3
Eucgr.J00681 Eucalyptus grandis HOM05D005005 ORTHO05D006178 1.4e-45 187.2 204 48.5
ECA248G3166 Erigeron canadensis HOM05D005005 ORTHO05D006178 3.9e-45 185.7 197 51.8
PGR031G0380 Punica granatum HOM05D005005 ORTHO05D006178 8.8e-45 184.5 171 56.7
THA.LOC104799326 Tarenaya hassleriana HOM05D005005 ORTHO05D006178 3.3e-44 182.6 197 47.2
unitig_61.g26369 Utricularia gibba HOM05D005005 ORTHO05D006178 9.7e-44 181.0 196 51.5
PSO339G0382 Papaver somniferum HOM05D005005 ORTHO05D006178 1.3e-43 180.6 208 47.6
PSO384G4770 Papaver somniferum HOM05D005005 ORTHO05D006178 4.8e-43 178.7 208 47.1
HanXRQChr11g0341211 Helianthus annuus HOM05D005005 ORTHO05D006178 2.0e-41 173.3 124 66.9
Cfa009893 Carpinus fangiana HOM05D005005 ORTHO05D006178 2.6e-41 172.9 204 46.6
PGR119G1568 Punica granatum HOM05D005005 ORTHO05D006178 4.5e-41 172.2 208 47.6
GSVIVG01037328001 Vitis vinifera HOM05D005005 ORTHO05D006178 4.5e-41 172.2 209 45.5
QL01p016772 Quercus lobata HOM05D005005 ORTHO05D006178 5.9e-41 171.8 204 46.6
SalBow6G0970 Salvia bowleyana HOM05D005005 ORTHO05D006178 5.9e-41 171.8 145 58.6
CANSAT54G2608 Cannabis sativa HOM05D005005 ORTHO05D006178 1.3e-40 170.6 203 44.8
EL10Ac4g10102 Beta vulgaris HOM05D005005 ORTHO05D006178 1.4e-39 167.2 209 45.5
Sc06g0004720 Simmondsia chinensis HOM05D005005 ORTHO05D006178 5.5e-39 165.2 200 46.0
Eucgr.G03212 Eucalyptus grandis HOM05D005005 ORTHO05D006178 1.2e-38 164.1 195 47.7
Haze_23255 Corylus avellana HOM05D005005 ORTHO05D006178 3.6e-38 162.5 201 44.8
Hund07434 Selenicereus undatus HOM05D005005 ORTHO05D006178 1.0e-37 161.0 214 45.8
ATR1096G052 Amborella trichopoda HOM05D005005 ORTHO05D006178 1.8e-37 160.2 204 42.6
Aqoxy1G00392 Aquilegia oxysepala HOM05D005005 ORTHO05D006178 3.9e-37 159.1 204 44.6
HanXRQChr01g0003701 Helianthus annuus HOM05D005005 ORTHO05D006178 3.3e-36 156.0 165 50.3
AUR62000208 Chenopodium quinoa HOM05D005005 ORTHO05D006178 7.4e-36 154.8 209 45.5
AUR62006554 Chenopodium quinoa HOM05D005005 ORTHO05D006178 7.4e-36 154.8 209 45.9
Psat2g140280 Pisum sativum HOM05D005005 ORTHO05D006178 7.4e-36 154.8 105 69.5
CDE04G1798 Ceratophyllum demersum HOM05D005005 ORTHO05D006178 2.8e-35 152.9 204 45.1
Psat1g148000 Pisum sativum HOM05D005005 ORTHO05D004359 2.4e-34 149.8 105 68.6
Zm00001eb129080 Zea mays HOM05D005005 ORTHO05D006178 3.1e-34 149.4 203 42.9
Psat7g158320 Pisum sativum HOM05D005005 ORTHO05D006178 4.1e-34 149.1 105 66.7
Psat0s3527g0040 Pisum sativum HOM05D005005 ORTHO05D006178 5.3e-34 148.7 106 68.9
Psat1g148040 Pisum sativum HOM05D005005 ORTHO05D006178 7.0e-34 148.3 105 68.6
CiPaw.14G111500 Carya illinoinensis HOM05D005005 ORTHO05D006178 9.1e-34 147.9 192 46.4
Os01g0280000 Oryza sativa ssp. japonica HOM05D005005 ORTHO05D006178 3.5e-33 146.0 132 56.8
Hund21969 Selenicereus undatus HOM05D005005 ORTHO05D006178 1.0e-32 144.4 212 42.5
Ah.06g194700 Amaranthus hybridus HOM05D005152 ORTHO05D006178 2.2e-32 143.3 207 43.0
CDE07G1185 Ceratophyllum demersum HOM05D005005 ORTHO05D006178 5.5e-31 138.7 204 42.6
Psat7g158200 Pisum sativum HOM05D005005 ORTHO05D006178 2.7e-30 136.3 73 83.6
Psat4g145120 Pisum sativum HOM05D005005 ORTHO05D006178 1.8e-29 133.7 70 87.1
HPP92_021193 Vanilla planifolia HOM05D005005 ORTHO05D006178 6.7e-29 131.7 203 41.4
SGA_v2.0_scaffold232G43481 Striga asiatica HOM05D005005 ORTHO05D006178 3.1e-26 122.9 137 48.9
Ciclev10027284m.g Citrus clementina HOM05D005005 ORTHO05D006178 4.5e-25 119.0 115 50.4
Ciclev10027071m.g Citrus clementina HOM05D005005 ORTHO05D006178 2.9e-24 116.3 80 63.8
Ciclev10027488m.g Citrus clementina HOM05D005005 ORTHO05D006178 2.9e-24 116.3 80 63.8
Ciclev10027527m.g Citrus clementina HOM05D005005 ORTHO05D006178 1.2e-20 104.4 71 69.0
SEGI_32986 Sequoiadendron giganteum HOM05D005005 ORTHO05D006178 7.5e-20 101.7 72 63.9
CBR_g41532 Chara braunii HOM05D005005 ORTHO05D006178 8.5e-16 88.2 72 55.6
CDE02G2432 Ceratophyllum demersum HOM05D005005 ORTHO05D006178 2.5e-15 86.7 83 50.6
Os01g0618000 Oryza sativa ssp. japonica HOM05D005005 ORTHO05D006178 2.1e-14 83.6 68 51.5
SMO367G0260 Selaginella moellendorffii HOM05D005005 ORTHO05D006178 6.1e-14 82.0 72 59.7
Os11g0525900 Oryza sativa ssp. japonica HOM05D005005 ORTHO05D006178 6.8e-13 78.6 73 50.7
Psat4g190960 Pisum sativum HOM05D005005 ORTHO05D006178 5.7e-12 75.5 39 84.6
TAR636G2479 Trochodendron aralioides HOM05D005005 ORTHO05D006178 1.7e-11 73.9 63 52.4
Cre01.g033950 Chlamydomonas reinhardtii HOM05D005005 ORTHO05D006178 5.9e-09 65.5 67 46.3
CDE02G4802 Ceratophyllum demersum HOM05D005005 ORTHO05D006178 8.6e-08 61.6 72 38.9
CDE09G0004 Ceratophyllum demersum HOM05D005005 ORTHO05D006178 2.5e-07 60.1 57 50.9
CDE04G0220 Ceratophyllum demersum HOM05D005005 ORTHO05D006178 2.1e-06 57.0 34 67.6


User provided reference genes

Program Settings