Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013073.1 Olea europaea HOM05D002553 ORTHO05D002767 4.9e-38 160.6 79 100.0
Cpa.g.sc48.14 Carica papaya HOM05D002553 ORTHO05D002767 1.0e-19 99.8 71 66.2
MSTRG.16977 Avicennia marina HOM05D002553 ORTHO05D002767 1.3e-19 99.4 67 68.7
Lj9C682T7 Lonicera japonica HOM05D002553 ORTHO05D002767 1.3e-19 99.4 70 65.7
Migut.B01190 Erythranthe guttata HOM05D002553 ORTHO05D002767 3.0e-19 98.2 68 66.2
TWI12G0069 Tripterygium wilfordii HOM05D002553 ORTHO05D002767 3.0e-19 98.2 70 64.3
TAR362G0623 Trochodendron aralioides HOM05D002553 ORTHO05D002767 5.1e-19 97.4 58 81.0
ClCG02G016020 Citrullus lanatus HOM05D002553 ORTHO05D002767 8.7e-19 96.7 64 70.3
Rhsim05G0144300 Rhododendron simsii HOM05D002553 ORTHO05D002767 8.7e-19 96.7 71 66.2
CsaV3_2G004990 Cucumis sativus L. HOM05D002553 ORTHO05D002767 1.9e-18 95.5 57 78.9
Phvul.006G093911 Phaseolus vulgaris HOM05D002553 ORTHO05D002767 1.9e-18 95.5 65 67.7
Atru.chr2.475 Acer truncatum HOM05D002553 ORTHO05D002767 2.5e-18 95.1 65 69.2
Hma1.2p1_0666F.1_g199470 Hydrangea macrophylla HOM05D002553 ORTHO05D002767 2.5e-18 95.1 65 69.2
MBI17_g29610_MAGBIO Magnolia biondii HOM05D002553 ORTHO05D002767 3.3e-18 94.7 68 64.7
Nn4g26152 Nelumbo nucifera HOM05D002553 ORTHO05D002767 3.3e-18 94.7 65 67.7
Nitab4.5_0004271g0010 Nicotiana tabacum HOM05D002553 ORTHO05D002767 3.3e-18 94.7 66 66.7
Thecc.05G308000 Theobroma cacao HOM05D002553 ORTHO05D002767 3.3e-18 94.7 64 71.9
CAN.G1134.23 Capsicum annuum HOM05D002553 ORTHO05D002767 4.3e-18 94.4 66 66.7
Cc02_g32710 Coffea canephora HOM05D002553 ORTHO05D002767 4.3e-18 94.4 71 66.2
Glyma.03G240100 Glycine max HOM05D002553 ORTHO05D002767 5.6e-18 94.0 65 66.2
GSVIVG01000009001 Vitis vinifera HOM05D002553 ORTHO05D002767 5.6e-18 94.0 65 66.2
Dinv22901 Davidia involucrata HOM05D002553 ORTHO05D002767 7.3e-18 93.6 65 66.2
Dinv23976 Davidia involucrata HOM05D002553 ORTHO05D002767 7.3e-18 93.6 65 66.2
Glyma.19G237000 Glycine max HOM05D002553 ORTHO05D002767 7.3e-18 93.6 64 67.2
Nitab4.5_0006809g0010 Nicotiana tabacum HOM05D002553 ORTHO05D002767 9.6e-18 93.2 66 66.7
PGSC0003DMG401028577 Solanum tuberosum HOM05D002553 ORTHO05D002767 9.6e-18 93.2 66 65.2
VMungo0540G1597 Vigna mungo HOM05D002553 ORTHO05D002767 1.6e-17 92.4 65 66.2
CiPaw.07G014800 Carya illinoinensis HOM05D002553 ORTHO05D002767 2.1e-17 92.0 71 64.8
MELO3C004297.2 Cucumis melo HOM05D002553 ORTHO05D002767 2.1e-17 92.0 56 76.8
Gorai.013G123700 Gossypium raimondii HOM05D002553 ORTHO05D002767 2.1e-17 92.0 64 67.2
Potri.005G039100 Populus trichocarpa HOM05D002553 ORTHO05D002767 2.1e-17 92.0 69 63.8
Ciclev10003913m.g Citrus clementina HOM05D002553 ORTHO05D002767 2.8e-17 91.7 65 64.6
QL03p004498 Quercus lobata HOM05D002553 ORTHO05D002767 2.8e-17 91.7 65 66.2
Gohir.D13G110400 Gossypium hirsutum HOM05D002553 ORTHO05D002767 3.6e-17 91.3 64 67.2
TAR636G3134 Trochodendron aralioides HOM05D002553 ORTHO05D002767 3.6e-17 91.3 65 64.6
ATR0626G263 Amborella trichopoda HOM05D002553 ORTHO05D002767 4.8e-17 90.9 58 74.1
vmacro19641 Vaccinium macrocarpon HOM05D002553 ORTHO05D002767 4.8e-17 90.9 64 68.8
Lj5g0009152 Lotus japonicus HOM05D002553 ORTHO05D002767 6.2e-17 90.5 64 65.6
Solyc01g098700.4 Solanum lycopersicum HOM05D002553 ORTHO05D002767 6.2e-17 90.5 66 62.1
Sopen01g042240 Solanum pennellii HOM05D002553 ORTHO05D002767 6.2e-17 90.5 66 62.1
arahy.Tifrunner.gnm1.ann1.0VD1AP Arachis hypogaea HOM05D002553 ORTHO05D002767 1.1e-16 89.7 58 72.4
Sc09g0003340 Simmondsia chinensis HOM05D002553 ORTHO05D002767 1.1e-16 89.7 70 57.1
TPR.G2739 Trifolium pratense HOM05D002553 ORTHO05D002767 1.1e-16 89.7 65 63.1
HPP92_001339 Vanilla planifolia HOM05D002553 ORTHO05D002767 1.1e-16 89.7 59 71.2
Aqoxy5G00545 Aquilegia oxysepala HOM05D002553 ORTHO05D002767 1.4e-16 89.4 65 64.6
Cfa006549 Carpinus fangiana HOM05D002553 ORTHO05D002767 1.4e-16 89.4 64 64.1
Haze_04233 Corylus avellana HOM05D002553 ORTHO05D002767 1.4e-16 89.4 64 64.1
Manes.09G163850 Manihot esculenta HOM05D002553 ORTHO05D002767 1.4e-16 89.4 64 64.1
Prupe.6G330000 Prunus persica HOM05D002553 ORTHO05D002767 1.4e-16 89.4 57 71.9
Sabra05G0037500 Salix brachista HOM05D002553 ORTHO05D002767 1.4e-16 89.4 69 62.3
Lsat_1_v5_gn_1_25020 Lactuca sativa HOM05D002553 ORTHO05D002767 1.8e-16 89.0 64 64.1
Zm00001eb017520 Zea mays HOM05D002553 ORTHO05D002767 1.8e-16 89.0 53 77.4
Ca_10093_v3 Cicer arietinum L. HOM05D002553 ORTHO05D002767 2.4e-16 88.6 64 62.5
COL.COLO4_13515 Corchorus olitorius HOM05D002553 ORTHO05D002767 2.4e-16 88.6 64 65.6
Duzib177G0165 Durio zibethinus HOM05D002553 ORTHO05D002767 2.4e-16 88.6 64 64.1
Eucgr.B02001 Eucalyptus grandis HOM05D002553 ORTHO05D002767 2.4e-16 88.6 60 68.3
Os03g0359100 Oryza sativa ssp. japonica HOM05D002553 ORTHO05D002767 2.4e-16 88.6 53 77.4
EL10Ac4g09309 Beta vulgaris HOM05D002553 ORTHO05D002767 3.1e-16 88.2 60 70.0
Glyma.10G156850 Glycine max HOM05D002553 ORTHO05D002767 3.1e-16 88.2 63 63.5
SalBow5G4087 Salvia bowleyana HOM05D002553 ORTHO05D002767 3.1e-16 88.2 68 60.3
MD04G1209000 Malus domestica HOM05D002553 ORTHO05D002767 5.3e-16 87.4 64 59.4
PSO210G1325 Papaver somniferum HOM05D002553 ORTHO05D002767 5.3e-16 87.4 65 61.5
SGA_v2.0_scaffold43G16279 Striga asiatica HOM05D002553 ORTHO05D002767 5.3e-16 87.4 64 62.5
VMungo0251G1212 Vigna mungo HOM05D002553 ORTHO05D011906 5.3e-16 87.4 57 70.2
FvH4_6g05350 Fragaria vesca HOM05D002553 ORTHO05D002767 6.9e-16 87.0 57 70.2
FAN09G0499 Fragaria x ananassa HOM05D002553 ORTHO05D002767 6.9e-16 87.0 57 70.2
FAN14G0929 Fragaria x ananassa HOM05D002553 ORTHO05D002767 6.9e-16 87.0 57 70.2
FAN14G5684 Fragaria x ananassa HOM05D002553 ORTHO05D002767 6.9e-16 87.0 57 70.2
AUR62000869 Chenopodium quinoa HOM05D002553 ORTHO05D002767 1.2e-15 86.3 64 60.9
FAN02G2444 Fragaria x ananassa HOM05D002553 ORTHO05D002767 1.5e-15 85.9 57 70.2
RcHm_v2.0_Chr3g0454121 Rosa chinensis HOM05D002553 ORTHO05D002767 1.5e-15 85.9 64 64.1
Sed0024851 Sechium edule HOM05D002553 ORTHO05D002767 1.5e-15 85.9 53 75.5
MSTRG.5079 Avicennia marina HOM05D002553 ORTHO05D002767 2.0e-15 85.5 64 60.9
Medtr1g082470 Medicago truncatula HOM05D002553 ORTHO05D002767 2.0e-15 85.5 64 59.4
Ah.06g190110 Amaranthus hybridus HOM05D002553 ORTHO05D002767 2.6e-15 85.1 57 68.4
TPR.G3085 Trifolium pratense HOM05D002553 ORTHO05D002767 2.6e-15 85.1 58 65.5
Migut.N01859 Erythranthe guttata HOM05D002553 ORTHO05D002767 3.4e-15 84.7 64 62.5
Thhalv10003627m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 3.4e-15 84.7 71 54.9
HanXRQChr02g0037091 Helianthus annuus HOM05D002553 ORTHO05D002767 4.5e-15 84.3 68 57.4
Lalb_Chr18g0045531 Lupinus albus HOM05D002553 ORTHO05D002767 4.5e-15 84.3 55 70.9
CANSAT54G1986 Cannabis sativa HOM05D002553 ORTHO05D002767 5.8e-15 84.0 63 61.9
AL6G39600 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 7.6e-15 83.6 56 69.6
ECA247G0575 Erigeron canadensis HOM05D002553 ORTHO05D002767 7.6e-15 83.6 64 62.5
Thhalv10020427m.g Eutrema salsugineum HOM05D002553 ORTHO05D002767 7.6e-15 83.6 64 59.4
PGR083G1620 Punica granatum HOM05D002553 ORTHO05D002767 9.9e-15 83.2 64 60.9
AT5G27410 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 1.3e-14 82.8 56 67.9
BcaNung04368 Brassica carinata HOM05D002553 ORTHO05D002767 1.7e-14 82.4 56 69.6
BNapus_Darmor_BZH_scaffold_114p00250 Brassica napus HOM05D002553 ORTHO05D002767 1.7e-14 82.4 57 66.7
AUR62005107 Chenopodium quinoa HOM05D002553 ORTHO05D002767 2.2e-14 82.0 57 66.7
THA.LOC104802808 Tarenaya hassleriana HOM05D002553 ORTHO05D002767 2.2e-14 82.0 64 59.4
AL3G15610 Arabidopsis lyrata HOM05D002553 ORTHO05D002767 2.9e-14 81.6 57 66.7
Medtr1g083370 Medicago truncatula HOM05D002553 ORTHO05D002767 2.9e-14 81.6 63 58.7
BolC1t05708H Brassica oleracea HOM05D002553 ORTHO05D002767 3.8e-14 81.3 57 64.9
SMO356G0084 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 3.8e-14 81.3 63 60.3
Carub.0003s0444 Capsella rubella HOM05D002553 ORTHO05D002767 4.9e-14 80.9 57 66.7
Sp3g04040 Schrenkiella parvula HOM05D002553 ORTHO05D002767 4.9e-14 80.9 60 60.0
Aa31LG5G15560 Aethionema arabicum HOM05D002553 ORTHO05D002767 6.4e-14 80.5 57 64.9
BcaNung02463 Brassica carinata HOM05D002553 ORTHO05D002767 6.4e-14 80.5 56 67.9
C07p40730 Brassica napus HOM05D002553 ORTHO05D002767 6.4e-14 80.5 56 67.9
BolC7t44601H Brassica oleracea HOM05D002553 ORTHO05D002767 6.4e-14 80.5 56 67.9
Carub.0006s2513 Capsella rubella HOM05D002553 ORTHO05D002767 6.4e-14 80.5 56 66.1
CARHR186010 Cardamine hirsuta HOM05D002553 ORTHO05D002767 6.4e-14 80.5 56 64.3
Psat6g149240 Pisum sativum HOM05D002553 ORTHO05D002767 6.4e-14 80.5 63 55.6
Hund07047 Selenicereus undatus HOM05D002553 ORTHO05D002767 8.4e-14 80.1 57 68.4
CARHR079530 Cardamine hirsuta HOM05D002553 ORTHO05D002767 2.4e-13 78.6 57 63.2
A06p37580 Brassica napus HOM05D002553 ORTHO05D002767 3.2e-13 78.2 56 66.1
BraA06t26677Z Brassica rapa HOM05D002553 ORTHO05D002767 3.2e-13 78.2 56 66.1
Peaxi162Scf00434g00216 Petunia axillaris HOM05D002553 ORTHO05D002767 3.2e-13 78.2 87 47.1
AT3G05190 Arabidopsis thaliana HOM05D002553 ORTHO05D002767 4.2e-13 77.8 57 64.9
A09p05260 Brassica napus HOM05D002553 ORTHO05D002767 7.1e-13 77.0 56 60.7
BraA09t36165Z Brassica rapa HOM05D002553 ORTHO05D002767 7.1e-13 77.0 56 60.7
BcaC04g23682 Brassica carinata HOM05D002553 ORTHO05D002767 1.2e-12 76.3 60 55.0
BcaC04g23681 Brassica carinata HOM05D002553 ORTHO05D002767 2.7e-12 75.1 56 58.9
C09p05740 Brassica napus HOM05D002553 ORTHO05D002767 1.0e-11 73.2 56 58.9
BolC9t53501H Brassica oleracea HOM05D002553 ORTHO05D002767 1.0e-11 73.2 56 58.9
Pp3c16_17790 Physcomitrium patens HOM05D002553 ORTHO05D002767 1.0e-11 73.2 69 52.2
Pp3c6_5420 Physcomitrium patens HOM05D002553 ORTHO05D002767 8.7e-11 70.1 64 53.1
MD12G1223700 Malus domestica HOM05D002553 ORTHO05D002767 3.3e-10 68.2 88 44.3
arahy.Tifrunner.gnm1.ann1.7PL8A0 Arachis hypogaea HOM05D002553 ORTHO05D002767 9.6e-10 66.6 42 73.8
CBR_g26142 Chara braunii HOM05D002553 ORTHO05D002767 3.7e-09 64.7 53 56.6
AagrBONN_evm.TU.Sc2ySwM_344.2814 Anthoceros agrestis HOM05D002553 ORTHO05D002767 2.2e-06 55.5 49 53.1
BcaB04g21368 Brassica carinata HOM05D002553 ORTHO05D002767 4.9e-06 54.3 39 59.0


User provided reference genes

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