Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 1.3e-79 299.7 149 100.0
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 2.7e-74 282.0 152 95.4
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 2.6e-64 248.8 150 84.0
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 4.4e-64 248.1 149 83.9
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 2.2e-63 245.7 149 83.9
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 2.8e-63 245.4 149 83.2
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 3.7e-63 245.0 149 82.6
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 3.5e-61 238.4 150 82.0
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.8e-60 235.0 150 81.3
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 6.6e-60 234.2 150 82.0
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.5e-59 232.3 150 80.7
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 3.6e-58 228.4 148 79.7
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 6.1e-58 227.6 148 81.1
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 5.7e-56 221.1 150 78.7
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 2.2e-55 219.2 150 78.0
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 6.4e-55 217.6 144 79.2
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 1.1e-54 216.9 160 75.0
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 1.1e-54 216.9 160 75.0
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 1.8e-54 216.1 150 76.7
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 3.2e-54 215.3 170 69.4
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 7.0e-54 214.2 153 73.2
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 1.6e-53 213.0 151 77.5
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 1.6e-53 213.0 150 76.0
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 2.0e-53 212.6 153 72.5
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 3.5e-53 211.8 149 76.5
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 3.5e-53 211.8 139 79.9
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 4.6e-53 211.5 157 71.3
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 4.6e-53 211.5 155 70.3
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 6.0e-53 211.1 166 69.3
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 1.3e-52 209.9 154 73.4
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 1.7e-52 209.5 160 71.2
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 1.7e-52 209.5 153 75.8
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 5.0e-52 208.0 158 70.3
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 5.0e-52 208.0 155 71.6
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 6.6e-52 207.6 154 70.1
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 8.6e-52 207.2 140 75.0
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 1.5e-51 206.5 156 69.9
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 1.5e-51 206.5 134 80.6
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 2.5e-51 205.7 144 79.2
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 2.5e-51 205.7 155 71.0
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 4.3e-51 204.9 139 80.6
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 5.6e-51 204.5 168 70.2
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 5.6e-51 204.5 140 75.7
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 7.3e-51 204.1 166 69.9
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 9.5e-51 203.8 140 76.4
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 9.5e-51 203.8 140 76.4
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 9.5e-51 203.8 140 76.4
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 1.2e-50 203.4 146 78.1
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 1.2e-50 203.4 143 75.5
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.6e-50 203.0 142 76.1
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 2.1e-50 202.6 155 70.3
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 2.1e-50 202.6 155 70.3
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 2.8e-50 202.2 145 73.8
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 3.6e-50 201.8 140 73.6
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 3.6e-50 201.8 143 72.7
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 4.7e-50 201.4 143 74.1
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 4.7e-50 201.4 143 72.7
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 4.7e-50 201.4 156 71.2
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 4.7e-50 201.4 144 75.0
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 6.2e-50 201.1 157 68.2
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 6.2e-50 201.1 157 68.2
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 8.0e-50 200.7 156 69.9
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 1.1e-49 200.3 157 68.2
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 1.4e-49 199.9 157 68.2
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 1.4e-49 199.9 157 68.2
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 1.4e-49 199.9 111 88.3
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 1.4e-49 199.9 158 68.4
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 1.4e-49 199.9 137 77.4
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 1.8e-49 199.5 139 74.8
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 1.8e-49 199.5 140 76.4
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 1.8e-49 199.5 137 76.6
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.3e-49 199.1 171 67.3
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 2.3e-49 199.1 137 75.9
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 3.1e-49 198.7 144 73.6
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 3.1e-49 198.7 158 67.1
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 3.1e-49 198.7 158 67.1
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 3.1e-49 198.7 158 67.1
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 3.1e-49 198.7 143 73.4
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 4.0e-49 198.4 159 67.3
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 4.0e-49 198.4 158 67.1
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 4.0e-49 198.4 137 75.9
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 4.0e-49 198.4 141 73.8
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 5.2e-49 198.0 140 74.3
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 5.2e-49 198.0 143 74.1
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 5.2e-49 198.0 158 67.1
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 5.2e-49 198.0 158 67.1
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 5.2e-49 198.0 107 89.7
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 6.8e-49 197.6 158 67.1
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 6.8e-49 197.6 158 67.1
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 8.9e-49 197.2 168 64.3
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 8.9e-49 197.2 141 75.2
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 1.2e-48 196.8 106 90.6
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.5e-48 196.4 168 64.3
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 1.5e-48 196.4 147 71.4
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 1.5e-48 196.4 138 74.6
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 1.5e-48 196.4 142 73.2
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 2.6e-48 195.7 158 67.7
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 3.4e-48 195.3 157 67.5
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 4.4e-48 194.9 114 85.1
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 4.4e-48 194.9 158 67.1
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 5.8e-48 194.5 100 93.0
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 5.8e-48 194.5 104 89.4
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 5.8e-48 194.5 159 66.7
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 9.8e-48 193.7 141 73.8
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 6.4e-47 191.0 156 67.9
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 1.4e-46 189.9 147 67.3
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 1.9e-46 189.5 142 69.0
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 1.9e-46 189.5 146 72.6
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 9.2e-46 187.2 112 84.8
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 2.0e-45 186.0 108 83.3
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 6.0e-45 184.5 146 65.8
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 2.5e-43 179.1 146 63.7
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 1.2e-42 176.8 156 65.4
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 2.3e-41 172.6 133 68.4
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 1.2e-34 150.2 160 56.2
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 5.2e-33 144.8 97 71.1
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 5.8e-32 141.4 139 51.1
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 2.2e-31 139.4 146 51.4
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 2.9e-31 139.0 114 62.3
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 2.7e-29 132.5 94 67.0
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 1.3e-28 130.2 97 61.9
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 3.3e-27 125.6 157 50.3
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 3.3e-27 125.6 117 59.0
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 1.2e-24 117.1 72 79.2
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 2.1e-18 96.3 52 88.5
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 3.6e-18 95.5 125 44.8
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 4.8e-18 95.1 50 90.0
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 4.8e-18 95.1 50 90.0
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 1.1e-17 94.0 90 52.2
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 2.5e-11 72.8 95 40.0


User provided reference genes

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