Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012938.1 Olea europaea HOM05D006167 ORTHO05D007635 2.0e-29 131.7 65 100.0
Cc03_g06850 Coffea canephora HOM05D006167 ORTHO05D007635 1.1e-19 99.4 68 77.9
Hma1.2p1_0112F.1_g054980 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 2.7e-18 94.7 64 71.9
CAN.G566.4 Capsicum annuum HOM05D006167 ORTHO05D007635 4.6e-18 94.0 67 70.1
HanXRQChr13g0410431 Helianthus annuus HOM05D006167 ORTHO05D007635 1.3e-17 92.4 66 71.2
Potri.008G174000 Populus trichocarpa HOM05D006167 ORTHO05D007635 1.3e-17 92.4 65 73.8
Solyc12g097040.1 Solanum lycopersicum HOM05D006167 ORTHO05D007635 1.8e-17 92.0 66 74.2
Potri.010G063100 Populus trichocarpa HOM05D006167 ORTHO05D007635 2.3e-17 91.7 65 75.4
CSS0017011 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 3.0e-17 91.3 65 70.8
CSS0046609 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 3.0e-17 91.3 65 70.8
Peaxi162Scf01007g00005 Petunia axillaris HOM05D006167 ORTHO05D007635 1.1e-16 89.4 71 64.8
DCAR_027359 Daucus carota HOM05D006167 ORTHO05D007635 3.3e-16 87.8 60 76.7
Dinv29784 Davidia involucrata HOM05D006167 ORTHO05D007635 3.3e-16 87.8 65 66.2
Lsat_1_v5_gn_1_76160 Lactuca sativa HOM05D006167 ORTHO05D007635 3.3e-16 87.8 62 74.2
Actinidia32969 Actinidia chinensis HOM05D006167 ORTHO05D007635 4.3e-16 87.4 67 70.1
ClCG06G007470 Citrullus lanatus HOM05D006167 ORTHO05D007635 4.3e-16 87.4 65 69.2
Sed0006558 Sechium edule HOM05D006167 ORTHO05D007635 4.3e-16 87.4 65 70.8
SalBow3G0251 Salvia bowleyana HOM05D006167 ORTHO05D007635 5.7e-16 87.0 67 71.6
SalBow3G4531 Salvia bowleyana HOM05D006167 ORTHO05D007635 5.7e-16 87.0 67 71.6
Dinv18834 Davidia involucrata HOM05D006167 ORTHO05D007635 7.4e-16 86.7 65 70.8
SalBow5G0916 Salvia bowleyana HOM05D006167 ORTHO05D007635 7.4e-16 86.7 66 71.2
SalBow5G2020 Salvia bowleyana HOM05D006167 ORTHO05D007635 7.4e-16 86.7 66 71.2
Migut.N00323 Erythranthe guttata HOM05D006167 ORTHO05D007635 9.6e-16 86.3 67 70.1
CiPaw.01G175200 Carya illinoinensis HOM05D006167 ORTHO05D007635 1.3e-15 85.9 65 66.2
Nitab4.5_0000867g0070 Nicotiana tabacum HOM05D006167 ORTHO05D007635 1.3e-15 85.9 65 69.2
SalBow5G4407 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.6e-15 85.5 67 70.1
SalBow5G4759 Salvia bowleyana HOM05D006167 ORTHO05D007635 1.6e-15 85.5 67 70.1
PGR004G2513 Punica granatum HOM05D006167 ORTHO05D007635 2.1e-15 85.1 65 67.7
CsaV3_2G012210 Cucumis sativus L. HOM05D006167 ORTHO05D007635 2.8e-15 84.7 65 67.7
MELO3C023070.2 Cucumis melo HOM05D006167 ORTHO05D007635 3.7e-15 84.3 65 66.2
Lj4g0015547 Lotus japonicus HOM05D006167 ORTHO05D007635 3.7e-15 84.3 62 69.4
Atru.chr4.1872 Acer truncatum HOM05D006167 ORTHO05D007635 1.4e-14 82.4 65 66.2
Eucgr.H02882 Eucalyptus grandis HOM05D006167 ORTHO05D007635 1.4e-14 82.4 66 63.6
Cpa.g.sc59.38 Carica papaya HOM05D006167 ORTHO05D007635 1.8e-14 82.0 65 63.1
Hma1.2p1_0432F.1_g151790 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.8e-14 82.0 63 66.7
EL10Ac3g06721 Beta vulgaris HOM05D006167 ORTHO05D007635 3.1e-14 81.3 65 63.1
Lsat_1_v5_gn_2_42001 Lactuca sativa HOM05D006167 ORTHO05D007635 3.1e-14 81.3 66 62.1
THA.LOC109117012 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 4.1e-14 80.9 65 64.6
Prupe.1G052700 Prunus persica HOM05D006167 ORTHO05D007635 5.3e-14 80.5 65 63.1
Duzib052G0384 Durio zibethinus HOM05D006167 ORTHO05D007635 1.2e-13 79.3 65 61.5
Duzib052G0895 Durio zibethinus HOM05D006167 ORTHO05D007635 1.2e-13 79.3 65 61.5
Duzib266G0005 Durio zibethinus HOM05D006167 ORTHO05D007635 1.2e-13 79.3 65 61.5
Aa31LG9G4150 Aethionema arabicum HOM05D006167 ORTHO05D007635 1.5e-13 79.0 65 58.5
Cfa014825 Carpinus fangiana HOM05D006167 ORTHO05D007635 2.0e-13 78.6 61 65.6
Hma1.2p1_0144F.1_g065120 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 2.0e-13 78.6 61 63.9
ECA248G1405 Erigeron canadensis HOM05D006167 ORTHO05D007635 4.5e-13 77.4 77 57.1
Thecc.04G269200 Theobroma cacao HOM05D006167 ORTHO05D007635 7.6e-13 76.6 65 58.5
Nn1g03031 Nelumbo nucifera HOM05D006167 ORTHO05D007635 1.0e-12 76.3 65 56.9
unitig_744.g24610 Utricularia gibba HOM05D006167 ORTHO05D007635 1.0e-12 76.3 62 67.7
THA.LOC109116489 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 1.3e-12 75.9 65 60.0
THA.LOC109116515 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 1.3e-12 75.9 65 60.0
TWI09G0967 Tripterygium wilfordii HOM05D006167 ORTHO05D007635 1.7e-12 75.5 65 58.5
Hma1.2p1_0014F.1_g009760 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 2.9e-12 74.7 60 63.3
SGA_v2.0_scaffold35G14127 Striga asiatica HOM05D006167 ORTHO05D007635 5.0e-12 73.9 67 61.2
Lalb_Chr03g0036881 Lupinus albus HOM05D006167 ORTHO05D007635 6.5e-12 73.6 65 60.0
vmacro15491 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 6.5e-12 73.6 70 58.6
vmacro22827 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 6.5e-12 73.6 70 58.6
CANSAT78G0928 Cannabis sativa HOM05D006167 ORTHO05D007635 1.4e-11 72.4 65 60.0
TAR362G1146 Trochodendron aralioides HOM05D006167 ORTHO05D007635 1.4e-11 72.4 65 55.4
SGA_v2.0_scaffold189G40388 Striga asiatica HOM05D006167 ORTHO05D007635 1.9e-11 72.0 67 58.2
BcaB04g17822 Brassica carinata HOM05D006167 ORTHO05D007635 2.5e-11 71.6 65 55.4
BcaC07g37498 Brassica carinata HOM05D006167 ORTHO05D007635 2.5e-11 71.6 65 55.4
A08p07960 Brassica napus HOM05D006167 ORTHO05D007635 2.5e-11 71.6 65 55.4
BolC8t47817H Brassica oleracea HOM05D006167 ORTHO05D007635 2.5e-11 71.6 65 55.4
BraA08t32818Z Brassica rapa HOM05D006167 ORTHO05D007635 2.5e-11 71.6 65 55.4
COL.COLO4_16007 Corchorus olitorius HOM05D006167 ORTHO05D007635 2.5e-11 71.6 61 59.0
Glyma.20G081600 Glycine max HOM05D006167 ORTHO05D007635 5.5e-11 70.5 60 63.3
RcHm_v2.0_Chr4g0396111 Rosa chinensis HOM05D006167 ORTHO05D007635 5.5e-11 70.5 63 57.1
CANSAT54G0143 Cannabis sativa HOM05D006167 ORTHO05D007635 7.2e-11 70.1 60 63.3
AL5G12040 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 9.3e-11 69.7 65 55.4
AL5G12300 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 9.3e-11 69.7 65 55.4
Gohir.D02G050200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.6e-10 68.9 65 52.3
Carub.0007s2902 Capsella rubella HOM05D006167 ORTHO05D007635 2.1e-10 68.6 65 52.3
CARHR219150 Cardamine hirsuta HOM05D006167 ORTHO05D007635 2.1e-10 68.6 65 52.3
Sp7g11110 Schrenkiella parvula HOM05D006167 ORTHO05D007635 2.1e-10 68.6 65 52.3
AL7G43090 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 2.7e-10 68.2 65 52.3
Ca_00011_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 3.5e-10 67.8 60 61.7
Gohir.D09G064700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 3.5e-10 67.8 65 53.8
Rhsim09G0043900 Rhododendron simsii HOM05D006167 ORTHO05D007635 3.5e-10 67.8 53 66.0
AT4G13520 Arabidopsis thaliana HOM05D006167 ORTHO05D007635 4.6e-10 67.4 65 52.3
Ca_26216_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 4.6e-10 67.4 60 61.7
Thhalv10026745m.g Eutrema salsugineum HOM05D006167 ORTHO05D007635 4.6e-10 67.4 65 52.3
Sc19g0005700 Simmondsia chinensis HOM05D006167 ORTHO05D007635 4.6e-10 67.4 65 58.5
Gorai.004G118700 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.3e-09 65.9 65 50.8
Gohir.D11G199000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.8e-09 65.5 65 52.3
SHI00872 Sapria himalayana HOM05D006167 ORTHO05D007635 2.3e-09 65.1 63 52.4
Gohir.D04G064600 Gossypium hirsutum HOM05D006167 ORTHO05D007635 3.0e-09 64.7 65 52.3
Gorai.011G088300 Gossypium raimondii HOM05D006167 ORTHO05D007635 3.0e-09 64.7 65 52.3
Migut.M01352 Erythranthe guttata HOM05D006167 ORTHO05D007635 5.1e-09 63.9 67 52.2
FAN12G1688 Fragaria x ananassa HOM05D006167 ORTHO05D007635 5.1e-09 63.9 60 55.0
FAN17G0547 Fragaria x ananassa HOM05D006167 ORTHO05D007635 5.1e-09 63.9 60 55.0
Sc13g0003020 Simmondsia chinensis HOM05D006167 ORTHO05D007635 5.1e-09 63.9 66 54.5
Aqoxy5G00097 Aquilegia oxysepala HOM05D006167 ORTHO05D007635 6.7e-09 63.5 65 55.4
arahy.Tifrunner.gnm1.ann1.C36CE0 Arachis hypogaea HOM05D000254 ORTHO05D000165 6.7e-09 63.5 48 66.7
Gohir.D03G098800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 6.7e-09 63.5 65 49.2
Gohir.D12G087200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 8.7e-09 63.2 65 52.3
Gorai.008G097400 Gossypium raimondii HOM05D006167 ORTHO05D007635 8.7e-09 63.2 65 49.2
Gohir.D08G110800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.1e-08 62.8 65 47.7
Gorai.012G072500 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.1e-08 62.8 65 50.8
FvH4_4g05200 Fragaria vesca HOM05D006167 ORTHO05D007635 1.5e-08 62.4 60 53.3
Psat6g109400 Pisum sativum HOM05D006167 ORTHO05D007635 1.5e-08 62.4 60 56.7
Gorai.003G103700 Gossypium raimondii HOM05D006167 ORTHO05D007635 3.3e-08 61.2 65 47.7
Gorai.011G155100 Gossypium raimondii HOM05D006167 ORTHO05D007635 3.3e-08 61.2 65 50.8
Gohir.D08G046000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 4.3e-08 60.8 64 50.0
Gorai.007G213200 Gossypium raimondii HOM05D006167 ORTHO05D007635 4.3e-08 60.8 65 47.7
Gorai.008G094700 Gossypium raimondii HOM05D006167 ORTHO05D007635 4.3e-08 60.8 64 50.0
AUR62035353 Chenopodium quinoa HOM05D006167 ORTHO05D007635 5.7e-08 60.5 55 56.4
Gohir.D05G314750 Gossypium hirsutum HOM05D006167 ORTHO05D007635 7.4e-08 60.1 65 49.2
Gorai.009G336300 Gossypium raimondii HOM05D006167 ORTHO05D007635 9.7e-08 59.7 65 47.7
Gorai.005G130300 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.3e-07 59.3 65 49.2
Phvul.007G232600 Phaseolus vulgaris HOM05D006167 ORTHO05D007635 1.3e-07 59.3 55 61.8
Nitab4.5_0002738g0050 Nicotiana tabacum HOM05D006167 ORTHO05D007635 2.2e-07 58.5 41 68.3
Gohir.D10G139400 Gossypium hirsutum HOM05D006167 ORTHO05D007635 6.3e-07 57.0 65 47.7
Mapoly0016s0086 Marchantia polymorpha HOM05D006167 ORTHO05D007635 6.3e-07 57.0 64 51.6
Gohir.D02G123800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.4e-06 55.8 65 46.2
Atru.chr1.877 Acer truncatum HOM05D006167 ORTHO05D007635 2.4e-06 55.1 49 67.3
Gohir.D01G140700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 4.1e-06 54.3 65 46.2
TPR.G23974 Trifolium pratense HOM05D006167 ORTHO05D007635 5.3e-06 53.9 60 50.0
A02p27890 Brassica napus HOM05D016819 ORTHO05D017546 6.9e-06 53.5 57 52.6
BraA02t07827Z Brassica rapa HOM05D016819 ORTHO05D017546 6.9e-06 53.5 57 52.6


User provided reference genes

Program Settings