Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012823.1 Olea europaea HOM05D000963 ORTHO05D005131 4.0e-78 294.7 144 100.0
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 7.1e-11 71.2 68 61.8
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 7.1e-11 71.2 68 61.8
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 7.1e-11 71.2 68 61.8
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 7.1e-11 71.2 68 61.8
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 7.1e-11 71.2 68 61.8
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 7.1e-11 71.2 68 61.8
Lsat_1_v5_gn_4_145420 Lactuca sativa HOM05D000963 ORTHO05D005131 1.6e-10 70.1 51 66.7
Gohir.A03G116614 Gossypium hirsutum HOM05D001325 ORTHO05D001540 2.1e-10 69.7 43 79.1
Gohir.A09G103232 Gossypium hirsutum HOM05D001325 ORTHO05D001540 2.1e-10 69.7 43 79.1
Gohir.D01G137751 Gossypium hirsutum HOM05D001325 ORTHO05D001540 2.1e-10 69.7 43 79.1
Gohir.D02G117554 Gossypium hirsutum HOM05D001325 ORTHO05D001540 2.1e-10 69.7 43 79.1
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 2.1e-10 69.7 94 48.9
Gohir.A04G061885 Gossypium hirsutum HOM05D001325 ORTHO05D001540 2.7e-10 69.3 43 76.7
Sc05g0004060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.7e-10 69.3 37 86.5
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 3.5e-10 68.9 44 75.0
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 3.5e-10 68.9 44 75.0
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 3.5e-10 68.9 44 75.0
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 3.5e-10 68.9 44 75.0
Gohir.A11G179832 Gossypium hirsutum HOM05D001325 ORTHO05D001540 3.5e-10 68.9 43 79.1
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.5e-10 68.9 44 75.0
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.5e-10 68.9 44 75.0
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 3.5e-10 68.9 36 88.9
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 3.5e-10 68.9 44 75.0
TAR633G0621 Trochodendron aralioides HOM05D000963 ORTHO05D005131 3.5e-10 68.9 44 75.0
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 4.6e-10 68.6 36 88.9
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 4.6e-10 68.6 36 88.9
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 4.6e-10 68.6 36 88.9
Sc25g0002000 Simmondsia chinensis HOM05D000963 ORTHO05D005131 4.6e-10 68.6 36 88.9
SGA_v2.0_scaffold126G33874 Striga asiatica HOM05D000963 ORTHO05D005131 4.6e-10 68.6 36 88.9
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 4.6e-10 68.6 36 88.9
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 4.6e-10 68.6 36 88.9
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 4.6e-10 68.6 36 88.9
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.6e-10 68.6 36 88.9
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.6e-10 68.6 36 88.9
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.6e-10 68.6 36 88.9
SalBow8G2706 Salvia bowleyana HOM05D000076 ORTHO05D013329 6.0e-10 68.2 37 81.1
Dinv44812 Davidia involucrata HOM05D000086 ORTHO05D000431 1.0e-09 67.4 36 83.3
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.0e-09 67.4 44 72.7
Solyc01g017050.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 1.0e-09 67.4 45 73.3
vmacro09305 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.0e-09 67.4 36 88.9
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.3e-09 67.0 44 72.7
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.3e-09 67.0 36 86.1
Gohir.A11G295125 Gossypium hirsutum HOM05D001325 ORTHO05D001540 1.8e-09 66.6 39 79.5
Sed0003644 Sechium edule HOM05D001325 ORTHO05D001540 2.3e-09 66.2 43 72.1
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 3.0e-09 65.9 44 70.5
SalBow1G0875 Salvia bowleyana HOM05D001325 ORTHO05D001540 3.0e-09 65.9 36 83.3
SalBow1G2962 Salvia bowleyana HOM05D001325 ORTHO05D001540 3.0e-09 65.9 36 83.3
SalBow1G7521 Salvia bowleyana HOM05D001325 ORTHO05D001540 3.0e-09 65.9 36 83.3
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 3.0e-09 65.9 36 83.3
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 3.0e-09 65.9 36 80.6
Gohir.A08G123750 Gossypium hirsutum HOM05D001325 ORTHO05D001540 3.9e-09 65.5 43 74.4
Sc14g0005060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 3.9e-09 65.5 36 86.1
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 5.1e-09 65.1 99 41.4
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 5.1e-09 65.1 44 72.7
Lsat_1_v5_gn_2_20620 Lactuca sativa HOM05D001325 ORTHO05D001540 5.1e-09 65.1 37 78.4
Lsat_1_v5_gn_6_106840 Lactuca sativa HOM05D001325 ORTHO05D001540 5.1e-09 65.1 37 78.4
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 5.1e-09 65.1 44 70.5
Lsat_1_v5_gn_4_116900 Lactuca sativa HOM05D001325 ORTHO05D001540 6.7e-09 64.7 37 75.7
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 8.7e-09 64.3 36 83.3
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 8.7e-09 64.3 36 83.3
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 8.7e-09 64.3 68 55.9
EL10Ac7g17438 Beta vulgaris HOM05D000963 ORTHO05D005131 1.1e-08 63.9 36 86.1
Gohir.A01G056250 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.5e-08 63.5 45 68.9
Lsat_1_v5_gn_1_95121 Lactuca sativa HOM05D001325 ORTHO05D001540 1.5e-08 63.5 36 77.8
Lsat_1_v5_gn_7_341 Lactuca sativa HOM05D001325 ORTHO05D001540 1.5e-08 63.5 36 77.8
Sed0019436 Sechium edule HOM05D001325 ORTHO05D001540 1.5e-08 63.5 43 69.8
SGA_v2.0_scaffold140G35498 Striga asiatica HOM05D001325 ORTHO05D001540 1.5e-08 63.5 39 74.4
SGA_v2.0_scaffold893G53704 Striga asiatica HOM05D001325 ORTHO05D001540 1.5e-08 63.5 39 74.4
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 2.5e-08 62.8 34 88.2
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 2.5e-08 62.8 36 77.8
COL.COLO4_03024 Corchorus olitorius HOM05D001325 ORTHO05D001540 2.5e-08 62.8 38 78.9
MBI05_g23316_MAGBIO Magnolia biondii HOM05D001325 ORTHO05D001540 2.5e-08 62.8 40 72.5
MBI13_g30267_MAGBIO Magnolia biondii HOM05D000571 ORTHO05D000435 2.5e-08 62.8 36 80.6
Gohir.A04G062885 Gossypium hirsutum HOM05D001325 ORTHO05D001540 3.3e-08 62.4 43 74.4
Oeu054714.1 Olea europaea HOM05D001070 ORTHO05D002096 3.3e-08 62.4 41 73.2
ClCG07G005850 Citrullus lanatus HOM05D000004 ORTHO05D000002 5.6e-08 61.6 43 69.8
MELO3C000106.2 Cucumis melo HOM05D001325 ORTHO05D001540 5.6e-08 61.6 43 69.8
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 5.6e-08 61.6 36 80.6
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 5.6e-08 61.6 44 68.2
CsaV3_UNG210040 Cucumis sativus L. HOM05D001325 ORTHO05D001540 7.4e-08 61.2 74 48.6
Gohir.A03G089701 Gossypium hirsutum HOM05D001325 ORTHO05D001540 7.4e-08 61.2 43 69.8
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.4e-08 61.2 36 80.6
Gohir.D09G105350 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.4e-08 61.2 36 77.8
Eucgr.K01909 Eucalyptus grandis HOM05D001325 ORTHO05D001540 9.6e-08 60.8 43 69.8
Gorai.005G170800 Gossypium raimondii HOM05D001325 ORTHO05D001540 1.3e-07 60.5 36 77.8
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.6e-07 60.1 44 63.6
Gorai.005G078000 Gossypium raimondii HOM05D000963 ORTHO05D005131 1.6e-07 60.1 60 56.7
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.6e-07 60.1 44 68.2
Lsat_1_v5_gn_8_97380 Lactuca sativa HOM05D001325 ORTHO05D001540 2.1e-07 59.7 41 68.3
Cpa.g.sc86.15 Carica papaya HOM05D000963 ORTHO05D005131 2.8e-07 59.3 37 73.0
Sc22g0004610 Simmondsia chinensis HOM05D000963 ORTHO05D011117 2.8e-07 59.3 32 87.5
Gohir.A09G107601 Gossypium hirsutum HOM05D001325 ORTHO05D001540 3.7e-07 58.9 43 67.4
Nitab4.5_0006211g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 3.7e-07 58.9 29 93.1
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 3.7e-07 58.9 36 77.8
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.4e-06 57.0 36 77.8
Gohir.A03G020550 Gossypium hirsutum HOM05D001325 ORTHO05D001540 1.4e-06 57.0 43 67.4
vmacro09302 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.4e-06 57.0 35 80.0
Nitab4.5_0000729g0060 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.8e-06 56.6 36 75.0
Gorai.011G282800 Gossypium raimondii HOM05D001325 ORTHO05D001540 5.3e-06 55.1 42 66.7
QL93p0823_0004 Quercus lobata HOM05D001325 ORTHO05D001540 5.3e-06 55.1 38 71.1
Cfa021581 Carpinus fangiana HOM05D000729 ORTHO05D002596 9.0e-06 54.3 43 62.8
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 9.0e-06 54.3 29 86.2
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 9.0e-06 54.3 29 86.2


User provided reference genes

Program Settings