Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 3.3e-68 261.5 127 100.0
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 5.2e-50 201.1 132 79.5
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 2.6e-49 198.7 132 78.0
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 7.6e-49 197.2 132 78.0
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 2.2e-48 195.7 132 77.3
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 3.8e-48 194.9 133 78.2
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 3.8e-48 194.9 133 78.2
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 6.4e-48 194.1 132 76.5
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 6.4e-48 194.1 132 76.5
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 6.4e-48 194.1 132 76.5
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 6.4e-48 194.1 132 76.5
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 6.4e-48 194.1 132 76.5
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 6.4e-48 194.1 132 76.5
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 6.4e-48 194.1 132 76.5
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 6.4e-48 194.1 132 76.5
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 6.4e-48 194.1 132 76.5
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 6.4e-48 194.1 131 76.3
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 6.4e-48 194.1 131 76.3
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 8.4e-48 193.7 131 76.3
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 1.4e-47 193.0 132 76.5
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 1.4e-47 193.0 132 76.5
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 1.4e-47 193.0 132 76.5
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 4.2e-47 191.4 131 75.6
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 5.4e-47 191.0 132 75.8
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 5.4e-47 191.0 133 77.4
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 7.1e-47 190.7 132 75.8
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 7.1e-47 190.7 132 75.8
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 1.2e-46 189.9 126 77.0
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 1.6e-46 189.5 133 75.9
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 1.6e-46 189.5 133 76.7
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 2.7e-46 188.7 132 75.0
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 2.7e-46 188.7 129 76.0
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 2.7e-46 188.7 129 76.0
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 3.5e-46 188.3 125 77.6
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 1.0e-45 186.8 132 73.5
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 3.0e-45 185.3 133 75.2
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 3.0e-45 185.3 121 75.2
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.1e-45 184.5 126 75.4
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 2.5e-44 182.2 122 77.0
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 5.6e-44 181.0 132 72.0
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 7.3e-44 180.6 131 73.3
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.4e-42 176.4 118 77.1
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.4e-42 176.4 118 77.1
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 3.1e-42 175.3 133 71.4
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 3.1e-42 175.3 127 70.9
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 3.4e-41 171.8 118 74.6
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 5.8e-41 171.0 123 74.0
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 7.6e-41 170.6 122 73.0
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 2.9e-40 168.7 127 70.1
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 5.4e-39 164.5 102 81.4
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 5.4e-39 164.5 102 81.4
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 2.1e-38 162.5 132 67.4
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 6.0e-38 161.0 106 76.4
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 1.0e-37 160.2 122 71.3
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.8e-37 159.5 109 75.2
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.1e-37 157.9 103 77.7
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 5.1e-37 157.9 106 76.4
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 2.5e-36 155.6 106 75.5
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 4.3e-36 154.8 110 72.7
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.6e-36 154.5 132 64.4
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 1.6e-35 152.9 145 62.8
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 4.8e-35 151.4 106 74.5
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 4.8e-35 151.4 118 68.6
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.8e-35 151.4 106 73.6
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 1.4e-34 149.8 93 81.7
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.9e-33 143.7 106 71.7
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.9e-32 141.4 106 70.8
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 1.1e-31 140.2 106 70.8
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.2e-31 138.3 106 69.8
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 4.2e-31 138.3 95 72.6
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 4.2e-31 138.3 95 72.6
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 4.2e-31 138.3 95 72.6
Gohir.D11G164850 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.3e-31 137.1 90 77.8
Nitab4.5_0004137g0020 Nicotiana tabacum HOM05D000963 ORTHO05D004715 3.5e-30 135.2 92 81.5
Lsat_1_v5_gn_2_90421 Lactuca sativa HOM05D000963 ORTHO05D004715 7.9e-30 134.0 92 77.2
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 7.9e-30 134.0 95 70.5
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 7.9e-30 134.0 95 71.6
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 7.9e-30 134.0 95 71.6
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.1e-28 130.2 103 68.0
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.9e-28 129.4 101 69.3
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 7.4e-28 127.5 132 57.6
SabraPtG0005400 Salix brachista HOM05D000963 ORTHO05D004715 9.0e-26 120.6 88 69.3
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 1.2e-25 120.2 90 71.1
Gohir.A01G119775 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.5e-25 118.2 80 76.2
Potri.002G263451 Populus trichocarpa HOM05D000963 ORTHO05D004715 1.0e-24 117.1 80 77.5
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-24 116.7 90 67.8
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-24 116.7 90 67.8
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-24 116.7 90 67.8
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-24 116.7 90 67.8
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-24 116.7 90 67.8
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-24 116.7 90 67.8
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-24 116.7 90 67.8
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-24 116.7 90 67.8
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-24 116.7 90 67.8
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-24 116.7 90 67.8
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 3.8e-24 115.2 90 66.7
COL.COLO4_03191 Corchorus olitorius HOM05D000963 ORTHO05D004715 3.8e-24 115.2 96 66.7
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 4.9e-24 114.8 86 68.6
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 6.5e-24 114.4 90 66.7
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 6.5e-24 114.4 88 68.2
BolSC46t60965H Brassica oleracea HOM05D000963 ORTHO05D004715 1.4e-23 113.2 66 86.4
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 1.4e-23 113.2 79 72.2
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.9e-23 112.8 93 67.7
BraSC59t46544Z Brassica rapa HOM05D000963 ORTHO05D004715 2.5e-23 112.5 83 69.9
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 4.2e-23 111.7 82 68.3
BolSC29t60514H Brassica oleracea HOM05D000963 ORTHO05D004715 5.5e-23 111.3 66 84.8
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 7.1e-23 110.9 79 69.6
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 7.1e-23 110.9 79 69.6
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 7.1e-23 110.9 79 69.6
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 7.1e-23 110.9 79 69.6
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 7.1e-23 110.9 79 69.6
BolSC45t60901H Brassica oleracea HOM05D000963 ORTHO05D004715 9.3e-23 110.5 83 68.7
BolSC35t60711H Brassica oleracea HOM05D000963 ORTHO05D004715 1.2e-22 110.2 83 68.7
Cpa.g.sc302.1 Carica papaya HOM05D000963 ORTHO05D004715 1.2e-22 110.2 66 84.8
BolSC29t60553H Brassica oleracea HOM05D000963 ORTHO05D004715 2.7e-22 109.0 64 85.9
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 3.5e-22 108.6 79 70.9
BolC2t10589H Brassica oleracea HOM05D000963 ORTHO05D004715 1.8e-21 106.3 66 81.8
BolSC49t61150H Brassica oleracea HOM05D000963 ORTHO05D004715 1.8e-21 106.3 66 81.8
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 1.8e-21 106.3 83 66.3
BolC2t10606H Brassica oleracea HOM05D000963 ORTHO05D004715 2.3e-21 105.9 84 67.9
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 3.9e-21 105.1 78 66.7
Manes.18G094701 Manihot esculenta HOM05D000963 ORTHO05D004715 3.3e-20 102.1 71 73.2
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 1.6e-19 99.8 89 59.6
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 4.8e-19 98.2 79 63.3
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 4.1e-18 95.1 76 65.8
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 6.9e-18 94.4 125 51.2
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 6.9e-18 94.4 76 65.8
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 9.0e-18 94.0 85 61.2
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 1.2e-17 93.6 122 48.4
FvH4_7g01961 Fragaria vesca HOM05D000963 ORTHO05D004715 2.2e-16 89.4 118 49.2
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 2.2e-16 89.4 67 68.7
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 2.2e-16 89.4 67 68.7
EL10Ac7g17374 Beta vulgaris HOM05D000963 ORTHO05D004715 3.8e-16 88.6 62 75.8
Oeu054713.1 Olea europaea HOM05D000963 ORTHO05D004715 5.0e-16 88.2 52 84.6
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 8.5e-16 87.4 71 66.2
BolSC43t60811H Brassica oleracea HOM05D000963 ORTHO05D004715 1.1e-15 87.0 45 93.3
BraSC179t45779Z Brassica rapa HOM05D000963 ORTHO05D004715 3.2e-15 85.5 47 87.2
EL10Ac7g17381 Beta vulgaris HOM05D000963 ORTHO05D004715 2.1e-14 82.8 62 71.0
Sabra08G0089800 Salix brachista HOM05D000963 ORTHO05D004715 3.6e-14 82.0 87 54.0
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 4.6e-14 81.6 54 72.2
Thecc.09G087300 Theobroma cacao HOM05D000963 ORTHO05D004715 4.6e-14 81.6 48 81.2
Lj4g0000207 Lotus japonicus HOM05D000963 ORTHO05D004715 7.9e-14 80.9 52 78.8
BcaNung01516 Brassica carinata HOM05D000963 ORTHO05D004715 6.7e-13 77.8 119 41.2
FAN01G1433 Fragaria x ananassa HOM05D000963 ORTHO05D004715 1.5e-12 76.6 47 83.0
Oeu033793.1 Olea europaea HOM05D001982 ORTHO05D003938 9.7e-12 73.9 54 72.2
arahy.Tifrunner.gnm1.ann1.HN8ZWX Arachis hypogaea HOM05D000963 ORTHO05D004715 1.3e-11 73.6 41 85.4
VMungo0331G0858 Vigna mungo HOM05D000963 ORTHO05D004715 3.7e-11 72.0 58 62.1
FAN06G2610 Fragaria x ananassa HOM05D000963 ORTHO05D004715 3.1e-10 68.9 39 87.2
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 3.1e-10 68.9 43 74.4
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 9.1e-10 67.4 64 56.2
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 1.2e-09 67.0 41 75.6
DCAR_017253 Daucus carota HOM05D000963 ORTHO05D004715 1.5e-09 66.6 49 67.3
CAN.G1594.2 Capsicum annuum HOM05D016096 ORTHO05D016167 1.0e-08 63.9 37 81.1
Gohir.A01G139250 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.7e-08 63.2 46 71.7
Medtr1g105230 Medicago truncatula HOM05D000963 ORTHO05D004715 5.0e-08 61.6 39 76.9
TPR.G27622 Trifolium pratense HOM05D000963 ORTHO05D004715 5.0e-08 61.6 46 71.7


User provided reference genes

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