Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 9.6e-71 270.0 133 100.0
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 6.8e-32 141.0 133 61.7
Sc05g0004060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.4e-29 133.3 133 56.4
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 5.9e-28 127.9 255 37.6
Sc25g0002000 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.3e-27 126.7 132 55.3
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 5.5e-26 121.3 164 49.4
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 3.0e-24 115.5 68 83.8
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 6.8e-24 114.4 66 84.8
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 6.8e-24 114.4 66 84.8
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 6.8e-24 114.4 66 84.8
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 6.8e-24 114.4 66 84.8
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 6.8e-24 114.4 66 84.8
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 6.8e-24 114.4 66 84.8
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 6.8e-24 114.4 66 84.8
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 6.8e-24 114.4 66 84.8
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 6.8e-24 114.4 66 84.8
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 6.8e-24 114.4 66 84.8
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 6.8e-24 114.4 66 84.8
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 6.8e-24 114.4 66 84.8
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 6.8e-24 114.4 66 84.8
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 8.8e-24 114.0 87 69.0
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 8.8e-24 114.0 87 69.0
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 8.8e-24 114.0 87 69.0
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 8.8e-24 114.0 87 69.0
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 8.8e-24 114.0 87 69.0
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 4.4e-23 111.7 66 81.8
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 9.8e-23 110.5 87 67.8
Sc22g0004610 Simmondsia chinensis HOM05D000963 ORTHO05D011117 9.8e-23 110.5 121 53.7
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 1.3e-22 110.2 66 81.8
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.3e-22 110.2 87 66.7
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.3e-22 110.2 69 79.7
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 1.3e-22 110.2 66 83.3
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 2.8e-22 109.0 66 80.3
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 3.7e-22 108.6 118 54.2
TAR633G0621 Trochodendron aralioides HOM05D000963 ORTHO05D005131 3.7e-22 108.6 80 68.8
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 6.3e-22 107.8 87 66.7
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.1e-21 107.1 80 66.2
Sc14g0005060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.1e-21 107.1 67 77.6
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 1.4e-21 106.7 88 64.8
MBI13_g30267_MAGBIO Magnolia biondii HOM05D000571 ORTHO05D000435 1.8e-21 106.3 77 70.1
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.1e-21 105.5 87 64.4
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.1e-21 105.5 66 78.8
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 4.1e-21 105.1 63 82.5
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 1.6e-20 103.2 91 63.7
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 2.0e-20 102.8 89 62.9
SHI47131 Sapria himalayana HOM05D000963 ORTHO05D005131 2.7e-20 102.4 92 64.1
Gohir.D09G105350 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.5e-20 101.7 67 77.6
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 5.9e-20 101.3 87 62.1
vmacro09305 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.0e-19 100.5 66 75.8
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 1.3e-19 100.1 132 48.5
Gohir.A01G056250 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.7e-19 99.8 66 72.7
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.7e-19 99.8 65 75.4
SHI42531 Sapria himalayana HOM05D000963 ORTHO05D005131 2.3e-19 99.4 56 87.5
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 2.9e-19 99.0 87 63.2
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 3.8e-19 98.6 66 75.8
SHI37614 Sapria himalayana HOM05D000963 ORTHO05D005131 5.0e-19 98.2 57 86.0
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.5e-18 95.9 87 59.8
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 5.5e-18 94.7 66 72.7
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.1e-17 92.8 66 72.7
SGA_v2.0_scaffold126G33874 Striga asiatica HOM05D000963 ORTHO05D005131 4.7e-17 91.7 54 77.8
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 6.1e-17 91.3 81 61.7
EL10Ac7g17438 Beta vulgaris HOM05D000963 ORTHO05D005131 8.0e-17 90.9 52 80.8
MBI16_g46635_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 1.0e-16 90.5 67 71.6
vmacro09302 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.4e-16 90.1 82 61.0
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 2.3e-16 89.4 85 60.0
Cpa.g.sc86.15 Carica papaya HOM05D000963 ORTHO05D005131 5.2e-16 88.2 66 66.7
Nitab4.5_0006211g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 6.8e-16 87.8 53 81.1
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 3.4e-15 85.5 87 57.5
Gorai.005G078000 Gossypium raimondii HOM05D000963 ORTHO05D005131 4.4e-15 85.1 82 58.5
Nitab4.5_0000729g0060 Nicotiana tabacum HOM05D000963 ORTHO05D005131 4.4e-15 85.1 57 68.4
Solyc01g017050.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 5.7e-15 84.7 70 61.4
Dinv44812 Davidia involucrata HOM05D000086 ORTHO05D000431 9.8e-15 84.0 45 82.2
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.4e-13 80.1 53 67.9
Nitab4.5_0008665g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 3.2e-13 79.0 48 77.1
arahy.Tifrunner.gnm1.ann1.URY1CV Arachis hypogaea HOM05D000533 ORTHO05D011117 7.0e-13 77.8 43 83.7
MELO3C033790.2 Cucumis melo HOM05D000963 ORTHO05D011117 7.0e-13 77.8 43 83.7
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 1.2e-12 77.0 53 66.0
MELO3C027127.2 Cucumis melo HOM05D000963 ORTHO05D011117 2.0e-12 76.3 43 81.4
Nitab4.5_0000017g0110 Nicotiana tabacum HOM05D000963 ORTHO05D005131 2.0e-12 76.3 49 75.5
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 4.5e-12 75.1 76 59.2
BcaC04g20703 Brassica carinata HOM05D000963 ORTHO05D011117 7.8e-12 74.3 43 81.4
BcaC04g20780 Brassica carinata HOM05D000963 ORTHO05D011117 7.8e-12 74.3 43 81.4
BcaNung07084 Brassica carinata HOM05D000963 ORTHO05D011117 7.8e-12 74.3 43 81.4
C04p22530 Brassica napus HOM05D000963 ORTHO05D011117 7.8e-12 74.3 43 81.4
C09p24690 Brassica napus HOM05D000963 ORTHO05D011117 7.8e-12 74.3 43 81.4
C09p39370 Brassica napus HOM05D000963 ORTHO05D011117 7.8e-12 74.3 43 81.4
BolSC47t61068H Brassica oleracea HOM05D000963 ORTHO05D011117 7.8e-12 74.3 43 81.4
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 7.8e-12 74.3 43 81.4
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 7.8e-12 74.3 43 81.4
Sopen06g015040 Solanum pennellii HOM05D000963 ORTHO05D011117 7.8e-12 74.3 43 81.4
PGSC0003DMG400039021 Solanum tuberosum HOM05D000963 ORTHO05D010201 7.8e-12 74.3 43 81.4
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 7.8e-12 74.3 43 81.4
Cpa.g.sc2719.1 Carica papaya HOM05D000963 ORTHO05D011117 1.0e-11 73.9 43 81.4
Lsat_1_v5_gn_4_145420 Lactuca sativa HOM05D000963 ORTHO05D005131 2.9e-11 72.4 58 63.8
Oeu038562.1 Olea europaea HOM05D000963 ORTHO05D011117 2.9e-11 72.4 43 79.1
unitig_8.g4107 Utricularia gibba HOM05D000963 ORTHO05D011117 3.9e-11 72.0 43 79.1
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.6e-11 71.2 53 60.4
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 8.6e-11 70.9 76 56.6
Gorai.007G303200 Gossypium raimondii HOM05D000963 ORTHO05D005131 5.6e-10 68.2 52 61.5
Hma1.2p1_0016F.1_g010990 Hydrangea macrophylla HOM05D000963 ORTHO05D011117 7.3e-10 67.8 51 66.7
VMungo1024G0002 Vigna mungo HOM05D000963 ORTHO05D005131 7.3e-10 67.8 70 51.4
Gohir.D11G280866 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.1e-09 66.2 73 47.9
SEGI_13287 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 6.1e-09 64.7 49 65.3
CSS0012622 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D011117 8.0e-09 64.3 43 74.4
Sopen11g020200 Solanum pennellii HOM05D000004 ORTHO05D000002 8.0e-09 64.3 38 73.7
Gohir.D12G186150 Gossypium hirsutum HOM05D000963 ORTHO05D011117 1.4e-08 63.5 43 67.4
Ca_03776_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 2.3e-08 62.8 156 34.6
Ca_03777_v3 Cicer arietinum L. HOM05D000963 ORTHO05D005131 2.3e-08 62.8 156 34.6
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 2.3e-08 62.8 66 57.6
Gohir.A12G053150 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.3e-08 62.8 76 53.9
TAR629G1823 Trochodendron aralioides HOM05D001041 ORTHO05D000846 3.1e-08 62.4 37 78.4
arahy.Tifrunner.gnm1.ann1.NK9AGX Arachis hypogaea HOM05D000089 ORTHO05D011117 4.0e-08 62.0 38 76.3
Oeu012823.1 Olea europaea HOM05D000963 ORTHO05D005131 4.0e-08 62.0 36 80.6
BraSC138t45525Z Brassica rapa HOM05D000963 ORTHO05D011117 5.2e-08 61.6 39 76.9
SHI36889 Sapria himalayana HOM05D000963 ORTHO05D005131 1.2e-07 60.5 39 76.9
SEGI_10061 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 1.2e-07 60.5 47 61.7
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 2.0e-07 59.7 39 66.7
Sopen01g027140 Solanum pennellii HOM05D000963 ORTHO05D011117 2.0e-07 59.7 36 75.0
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 2.6e-07 59.3 36 75.0
arahy.Tifrunner.gnm1.ann1.BMCQ1I Arachis hypogaea HOM05D000963 ORTHO05D005131 3.7e-06 55.5 33 81.8
Solyc10g047410.1 Solanum lycopersicum HOM05D000890 ORTHO05D000697 6.4e-06 54.7 31 80.6


User provided reference genes

Program Settings