Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012768.1 Olea europaea HOM05D007952 ORTHO05D009823 1.7e-179 632.5 310 100.0
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 2.6e-18 97.1 72 70.8
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 2.6e-18 97.1 72 70.8
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.6e-18 95.5 359 31.2
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 1.1e-16 91.7 74 66.2
arahy.Tifrunner.gnm1.ann1.GIFH8E Arachis hypogaea HOM05D007952 ORTHO05D009823 1.7e-14 84.3 55 76.4
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 2.3e-14 84.0 57 75.4
arahy.Tifrunner.gnm1.ann1.RE2PS1 Arachis hypogaea HOM05D007952 ORTHO05D009823 6.6e-14 82.4 57 73.7
PGSC0003DMG400028997 Solanum tuberosum HOM05D007952 ORTHO05D009823 6.6e-14 82.4 57 73.7
Sc01g0006530 Simmondsia chinensis HOM05D007952 ORTHO05D009823 1.1e-13 81.6 55 74.5
Sc04g0003580 Simmondsia chinensis HOM05D007952 ORTHO05D009823 2.5e-13 80.5 55 72.7
BolSC44t60812H Brassica oleracea HOM05D007952 ORTHO05D009823 3.3e-13 80.1 55 74.5
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 3.3e-13 80.1 55 74.5
Lsat_1_v5_gn_4_99801 Lactuca sativa HOM05D007952 ORTHO05D009823 3.3e-13 80.1 55 74.5
PGSC0003DMG400035391 Solanum tuberosum HOM05D007952 ORTHO05D009823 3.3e-13 80.1 55 74.5
Sopen11g014330 Solanum pennellii HOM05D000743 ORTHO05D000580 9.6e-13 78.6 58 69.0
Oeu020621.1 Olea europaea HOM05D007952 ORTHO05D009823 1.6e-12 77.8 55 72.7
VMungo0720G0997 Vigna mungo HOM05D004182 ORTHO05D007321 2.8e-12 77.0 58 69.0
Nn5g29057 Nelumbo nucifera HOM05D007952 ORTHO05D009823 1.1e-11 75.1 55 72.7
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 5.3e-11 72.8 63 65.1
Peaxi162Scf00002g00723 Petunia axillaris HOM05D007952 ORTHO05D009823 5.3e-11 72.8 49 63.3
DCAR_004958 Daucus carota HOM05D007952 ORTHO05D009823 6.9e-11 72.4 45 80.0
Medtr3g035635 Medicago truncatula HOM05D007952 ORTHO05D009823 9.0e-11 72.0 59 67.8
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 9.0e-11 72.0 59 67.8
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.2e-10 71.6 121 45.5
ECA246G1432 Erigeron canadensis HOM05D007952 ORTHO05D009823 1.2e-10 71.6 57 68.4
Medtr0002s0270 Medicago truncatula HOM05D007952 ORTHO05D009823 1.5e-10 71.2 55 67.3
CSS0039937 Camellia sinensis var. sinensis HOM05D007952 ORTHO05D009823 2.0e-10 70.9 69 59.4
arahy.Tifrunner.gnm1.ann1.J5KLX8 Arachis hypogaea HOM05D007952 ORTHO05D009823 2.6e-10 70.5 133 39.1
arahy.Tifrunner.gnm1.ann1.PHD7EH Arachis hypogaea HOM05D007952 ORTHO05D009823 4.5e-10 69.7 55 67.3
A08p09050 Brassica napus HOM05D001966 ORTHO05D010127 4.5e-10 69.7 61 60.7
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 4.5e-10 69.7 55 63.6
Ca_24280_v3 Cicer arietinum L. HOM05D004182 ORTHO05D007321 5.8e-10 69.3 47 72.3
SEGI_13516 Sequoiadendron giganteum HOM05D004182 ORTHO05D007321 5.8e-10 69.3 53 66.0
Sc21g0004590 Simmondsia chinensis HOM05D007952 ORTHO05D009823 7.6e-10 68.9 58 60.3
Atru.chr13.2454 Acer truncatum HOM05D007952 ORTHO05D009823 9.9e-10 68.6 74 55.4
arahy.Tifrunner.gnm1.ann1.0845WK Arachis hypogaea HOM05D007952 ORTHO05D009823 9.9e-10 68.6 74 55.4
arahy.Tifrunner.gnm1.ann1.88RRM9 Arachis hypogaea HOM05D007952 ORTHO05D009823 9.9e-10 68.6 74 55.4
arahy.Tifrunner.gnm1.ann1.HDQ4NC Arachis hypogaea HOM05D007952 ORTHO05D009823 9.9e-10 68.6 74 55.4
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 1.7e-09 67.8 49 69.4
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 1.7e-09 67.8 58 62.1
Nn029s41587 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.9e-09 67.0 79 51.9
Nn064s42224 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.9e-09 67.0 79 51.9
Nn206s45068 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.9e-09 67.0 79 51.9
Nn219s45283 Nelumbo nucifera HOM05D007952 ORTHO05D009823 2.9e-09 67.0 79 51.9
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 1.9e-08 64.3 53 66.0
Oeu059001.1 Olea europaea HOM05D000540 ORTHO05D000681 2.4e-08 63.9 52 59.6
Cpa.g.sc120.41 Carica papaya HOM05D001966 ORTHO05D010127 5.4e-08 62.8 85 45.9
CAN.G1186.47 Capsicum annuum HOM05D007952 ORTHO05D009823 7.1e-08 62.4 45 71.1
Gohir.A06G123204 Gossypium hirsutum HOM05D001966 ORTHO05D010127 4.6e-07 59.7 26 96.2
Peaxi162Scf00080g00510 Petunia axillaris HOM05D011856 ORTHO05D013014 4.6e-07 59.7 36 77.8
Nitab4.5_0001577g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 1.0e-06 58.5 37 75.7
arahy.Tifrunner.gnm1.ann1.71HDHZ Arachis hypogaea HOM05D001966 ORTHO05D010127 1.3e-06 58.2 71 46.5
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 8.7e-06 55.5 31 80.6


User provided reference genes

Program Settings