Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012736.1 Olea europaea HOM05D004322 ORTHO05D005033 8.3e-35 149.8 76 100.0
Oeu044826.1 Olea europaea HOM05D004322 ORTHO05D005033 6.4e-27 123.6 72 88.9
Oeu044828.1 Olea europaea HOM05D004322 ORTHO05D005033 6.4e-27 123.6 72 88.9
Lalb_Chr15g0090591 Lupinus albus HOM05D004322 ORTHO05D005033 3.3e-23 111.3 72 75.0
MSTRG.16544 Avicennia marina HOM05D004322 ORTHO05D005033 7.3e-23 110.2 72 77.8
Nitab4.5_0000249g0270 Nicotiana tabacum HOM05D004322 ORTHO05D005033 9.5e-23 109.8 72 77.8
PGSC0003DMG400029776 Solanum tuberosum HOM05D004322 ORTHO05D005033 2.8e-22 108.2 72 76.4
Solyc01g104600.4 Solanum lycopersicum HOM05D004322 ORTHO05D005033 3.6e-22 107.8 72 76.4
Sopen01g047110 Solanum pennellii HOM05D004322 ORTHO05D005033 3.6e-22 107.8 72 76.4
Actinidia39064 Actinidia chinensis HOM05D004322 ORTHO05D005033 6.2e-22 107.1 72 75.0
Actinidia00226 Actinidia chinensis HOM05D004322 ORTHO05D005033 8.1e-22 106.7 72 73.6
MSTRG.5246 Avicennia marina HOM05D004322 ORTHO05D005033 8.1e-22 106.7 73 72.6
Peaxi162Scf01807g00011 Petunia axillaris HOM05D004322 ORTHO05D005033 8.1e-22 106.7 72 76.4
TAR376G0532 Trochodendron aralioides HOM05D004322 ORTHO05D005033 1.1e-21 106.3 72 70.8
Lj9A313T47 Lonicera japonica HOM05D004322 ORTHO05D005033 1.4e-21 105.9 72 73.6
SalBow6G0151 Salvia bowleyana HOM05D004322 ORTHO05D005033 1.4e-21 105.9 72 75.0
SalBow6G5232 Salvia bowleyana HOM05D004322 ORTHO05D005033 1.4e-21 105.9 72 75.0
Glyma.08G183900 Glycine max HOM05D004322 ORTHO05D005033 1.8e-21 105.5 72 73.6
VMungo0251G0859 Vigna mungo HOM05D004322 ORTHO05D005033 1.8e-21 105.5 72 73.6
CiPaw.05G042000 Carya illinoinensis HOM05D004322 ORTHO05D005033 2.3e-21 105.1 72 72.2
arahy.Tifrunner.gnm1.ann1.1NY3A5 Arachis hypogaea HOM05D004322 ORTHO05D005033 3.1e-21 104.8 72 72.2
arahy.Tifrunner.gnm1.ann1.H25YH4 Arachis hypogaea HOM05D004322 ORTHO05D005033 3.1e-21 104.8 72 72.2
GSVIVG01029694001 Vitis vinifera HOM05D004322 ORTHO05D005033 4.0e-21 104.4 72 70.8
Migut.N01026 Erythranthe guttata HOM05D004322 ORTHO05D005033 5.2e-21 104.0 72 72.2
QL11p019123 Quercus lobata HOM05D004322 ORTHO05D005033 5.2e-21 104.0 74 68.9
TWI23G0630 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 5.2e-21 104.0 72 72.2
TWI23G1123 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 5.2e-21 104.0 72 72.2
Aqoxy5G01565 Aquilegia oxysepala HOM05D004322 ORTHO05D005033 6.8e-21 103.6 72 72.2
Cfa015337 Carpinus fangiana HOM05D004322 ORTHO05D005033 6.8e-21 103.6 72 70.8
ECA240G2745 Erigeron canadensis HOM05D004322 ORTHO05D005033 6.8e-21 103.6 72 72.2
Glyma.15G048900 Glycine max HOM05D004322 ORTHO05D005033 6.8e-21 103.6 72 72.2
Nn5g28787 Nelumbo nucifera HOM05D004322 ORTHO05D005033 1.2e-20 102.8 72 70.8
QL04p052291 Quercus lobata HOM05D004322 ORTHO05D005033 1.2e-20 102.8 72 69.4
SGA_v2.0_scaffold145G36061 Striga asiatica HOM05D004322 ORTHO05D005033 1.2e-20 102.8 72 72.2
vmacro01793 Vaccinium macrocarpon HOM05D004322 ORTHO05D005033 1.2e-20 102.8 72 70.8
CAN.G1352.10 Capsicum annuum HOM05D004322 ORTHO05D005033 1.5e-20 102.4 72 72.2
Cc02_g22140 Coffea canephora HOM05D004322 ORTHO05D005033 1.5e-20 102.4 72 72.2
Phvul.006G211500 Phaseolus vulgaris HOM05D004322 ORTHO05D005033 1.5e-20 102.4 72 70.8
HanXRQChr03g0066481 Helianthus annuus HOM05D004322 ORTHO05D005033 2.0e-20 102.1 72 70.8
MD15G1419900 Malus domestica HOM05D004322 ORTHO05D005033 2.6e-20 101.7 72 69.4
CANSAT11G1833 Cannabis sativa HOM05D004322 ORTHO05D005033 4.4e-20 100.9 72 70.8
Ca_00095_v3 Cicer arietinum L. HOM05D004322 ORTHO05D005033 4.4e-20 100.9 72 68.1
Ca_29934_v3 Cicer arietinum L. HOM05D004322 ORTHO05D005033 4.4e-20 100.9 72 68.1
Manes.10G133500 Manihot esculenta HOM05D004322 ORTHO05D005033 4.4e-20 100.9 72 69.4
Rhsim11G0132600 Rhododendron simsii HOM05D004322 ORTHO05D005033 5.8e-20 100.5 72 69.4
Aqoxy5G02055 Aquilegia oxysepala HOM05D004322 ORTHO05D005033 7.5e-20 100.1 72 69.4
Potri.001G207900 Populus trichocarpa HOM05D004322 ORTHO05D005033 7.5e-20 100.1 72 69.4
Atru.chr6.1013_Atru.chr6.1014 Acer truncatum HOM05D004322 ORTHO05D005033 9.9e-20 99.8 72 69.4
Cpa.g.sc157.24 Carica papaya HOM05D004322 ORTHO05D005033 9.9e-20 99.8 72 68.1
Lsat_1_v5_gn_9_116181 Lactuca sativa HOM05D004322 ORTHO05D005033 9.9e-20 99.8 69 71.0
Lj6g0010196 Lotus japonicus HOM05D004322 ORTHO05D005033 9.9e-20 99.8 72 69.4
unitig_62.g23621 Utricularia gibba HOM05D004322 ORTHO05D005033 1.3e-19 99.4 72 69.4
Sabra01G0160700 Salix brachista HOM05D004322 ORTHO05D005033 1.7e-19 99.0 72 68.1
Manes.10G133677 Manihot esculenta HOM05D004322 ORTHO05D005033 2.2e-19 98.6 72 68.1
Dinv24253 Davidia involucrata HOM05D004322 ORTHO05D005033 2.9e-19 98.2 72 68.1
TPR.G19733 Trifolium pratense HOM05D004322 ORTHO05D005033 2.9e-19 98.2 72 65.3
TWI14G0809 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 2.9e-19 98.2 72 69.4
A04p08040 Brassica napus HOM05D004322 ORTHO05D005033 4.9e-19 97.4 72 68.1
BraA04t16492Z Brassica rapa HOM05D004322 ORTHO05D005033 4.9e-19 97.4 72 68.1
Glyma.10G118567 Glycine max HOM05D004322 ORTHO05D005033 4.9e-19 97.4 73 67.1
Thecc.03G241900 Theobroma cacao HOM05D004322 ORTHO05D005033 4.9e-19 97.4 72 69.4
AUR62018226 Chenopodium quinoa HOM05D004322 ORTHO05D005033 6.4e-19 97.1 72 66.7
Prupe.1G564800 Prunus persica HOM05D004322 ORTHO05D005033 6.4e-19 97.1 72 66.7
BcaC02g09358 Brassica carinata HOM05D004322 ORTHO05D005033 8.3e-19 96.7 72 66.7
C04p41720 Brassica napus HOM05D004322 ORTHO05D005033 8.3e-19 96.7 72 66.7
RcHm_v2.0_Chr7g0223291 Rosa chinensis HOM05D004322 ORTHO05D005033 8.3e-19 96.7 72 68.1
Hund13069 Selenicereus undatus HOM05D004322 ORTHO05D005033 8.3e-19 96.7 72 65.3
BcaB04g18113 Brassica carinata HOM05D004322 ORTHO05D005033 1.1e-18 96.3 72 65.3
BraA08t33032Z Brassica rapa HOM05D004322 ORTHO05D005033 1.1e-18 96.3 72 65.3
Sabra01G0160600 Salix brachista HOM05D004322 ORTHO05D005033 1.1e-18 96.3 72 66.7
Sp7g11930 Schrenkiella parvula HOM05D004322 ORTHO05D005033 1.1e-18 96.3 72 65.3
BcaC07g37720 Brassica carinata HOM05D004322 ORTHO05D005033 1.4e-18 95.9 72 63.9
BolC8t48099H Brassica oleracea HOM05D004322 ORTHO05D005033 1.4e-18 95.9 72 65.3
AUR62037741 Chenopodium quinoa HOM05D004322 ORTHO05D005033 1.4e-18 95.9 72 66.7
COL.COLO4_07504 Corchorus olitorius HOM05D004322 ORTHO05D005033 1.4e-18 95.9 72 68.1
Ciclev10002548m.g Citrus clementina HOM05D004322 ORTHO05D005033 1.9e-18 95.5 73 71.2
BcaB02g08633 Brassica carinata HOM05D004322 ORTHO05D005033 2.4e-18 95.1 72 65.3
Eucgr.I02706 Eucalyptus grandis HOM05D004322 ORTHO05D005033 2.4e-18 95.1 72 66.7
FvH4_5g29770 Fragaria vesca HOM05D004322 ORTHO05D005033 2.4e-18 95.1 72 65.3
Potri.003G022001 Populus trichocarpa HOM05D004322 ORTHO05D005033 2.4e-18 95.1 69 66.7
Sed0005743 Sechium edule HOM05D004322 ORTHO05D005033 2.4e-18 95.1 72 66.7
MD08G1227500 Malus domestica HOM05D004322 ORTHO05D005033 3.2e-18 94.7 72 65.3
FAN18G2629 Fragaria x ananassa HOM05D004322 ORTHO05D005033 4.1e-18 94.4 72 65.3
PSO063G0058 Papaver somniferum HOM05D004322 ORTHO05D005033 4.1e-18 94.4 72 66.7
AT4G14110 Arabidopsis thaliana HOM05D004322 ORTHO05D005033 5.4e-18 94.0 72 65.3
AL7G42300 Arabidopsis lyrata HOM05D004322 ORTHO05D005033 7.1e-18 93.6 72 63.9
Carub.0007s2831 Capsella rubella HOM05D004322 ORTHO05D005033 7.1e-18 93.6 72 63.9
BolC4t25750H Brassica oleracea HOM05D004322 ORTHO05D005033 9.2e-18 93.2 72 65.3
ClCG09G014140 Citrullus lanatus HOM05D004322 ORTHO05D005033 9.2e-18 93.2 72 65.3
Ah.11g045370 Amaranthus hybridus HOM05D004322 ORTHO05D005033 1.2e-17 92.8 72 63.9
EL10Ac2g03233 Beta vulgaris HOM05D004322 ORTHO05D005033 1.2e-17 92.8 72 61.1
Medtr2g007840 Medicago truncatula HOM05D004322 ORTHO05D005033 1.2e-17 92.8 72 63.9
PSO782G1933 Papaver somniferum HOM05D004322 ORTHO05D005033 1.2e-17 92.8 72 65.3
Sc10g0004980 Simmondsia chinensis HOM05D004322 ORTHO05D005033 1.2e-17 92.8 72 62.5
FAN08G1384 Fragaria x ananassa HOM05D004322 ORTHO05D005033 1.6e-17 92.4 72 63.9
Gohir.D03G167900 Gossypium hirsutum HOM05D004322 ORTHO05D005033 2.1e-17 92.0 72 63.9
Gorai.003G177600 Gossypium raimondii HOM05D004322 ORTHO05D005033 2.1e-17 92.0 72 63.9
Medtr0153s0030 Medicago truncatula HOM05D004322 ORTHO05D005033 2.1e-17 92.0 72 63.9
THA.LOC104804784 Tarenaya hassleriana HOM05D004322 ORTHO05D005033 2.1e-17 92.0 72 62.5
Aa31LG9G3260 Aethionema arabicum HOM05D004322 ORTHO05D005033 2.7e-17 91.7 72 62.5
CARHR220130 Cardamine hirsuta HOM05D004322 ORTHO05D005033 3.5e-17 91.3 72 62.5
FAN13G1883 Fragaria x ananassa HOM05D004322 ORTHO05D005033 3.5e-17 91.3 72 62.5
PGR042G3064 Punica granatum HOM05D004322 ORTHO05D005033 3.5e-17 91.3 72 65.3
A08p10330 Brassica napus HOM05D004322 ORTHO05D005033 4.6e-17 90.9 72 62.5
Duzib084G1309 Durio zibethinus HOM05D004322 ORTHO05D005033 4.6e-17 90.9 72 63.9
Duzib205G0368 Durio zibethinus HOM05D004322 ORTHO05D005033 4.6e-17 90.9 72 62.5
Thhalv10025920m.g Eutrema salsugineum HOM05D004322 ORTHO05D005033 4.6e-17 90.9 72 62.5
Gohir.A03G004600 Gossypium hirsutum HOM05D004322 ORTHO05D005033 4.6e-17 90.9 72 62.5
BolC3t14638H Brassica oleracea HOM05D004322 ORTHO05D005033 7.8e-17 90.1 72 62.5
CDE05G2724 Ceratophyllum demersum HOM05D004322 ORTHO05D005033 7.8e-17 90.1 72 63.9
CsaV3_6G037290 Cucumis sativus L. HOM05D004322 ORTHO05D005033 7.8e-17 90.1 72 62.5
FAN04G2215 Fragaria x ananassa HOM05D004322 ORTHO05D005033 7.8e-17 90.1 72 62.5
MELO3C014386.2 Cucumis melo HOM05D004322 ORTHO05D005033 1.0e-16 89.7 72 63.9
Gohir.D08G183600 Gossypium hirsutum HOM05D004322 ORTHO05D005033 1.3e-16 89.4 72 61.1
Os04g0428900 Oryza sativa ssp. japonica HOM05D004322 ORTHO05D005033 1.3e-16 89.4 72 61.1
HPP92_016157 Vanilla planifolia HOM05D004322 ORTHO05D005033 1.3e-16 89.4 71 64.8
BcaC01g05770 Brassica carinata HOM05D004322 ORTHO05D005033 1.7e-16 89.0 72 61.1
CDE05G0654 Ceratophyllum demersum HOM05D004322 ORTHO05D005033 1.7e-16 89.0 72 62.5
Hma1.2p1_0557F.1_g178250 Hydrangea macrophylla HOM05D004322 ORTHO05D005033 2.3e-16 88.6 73 65.8
SEGI_18567 Sequoiadendron giganteum HOM05D004322 ORTHO05D005033 5.1e-16 87.4 73 60.3
Thecc.07G026500 Theobroma cacao HOM05D004322 ORTHO05D005033 8.6e-16 86.7 67 67.2
Zm00001eb082980 Zea mays HOM05D004322 ORTHO05D005033 2.5e-15 85.1 72 58.3
ATR0584G136 Amborella trichopoda HOM05D004322 ORTHO05D005033 1.6e-14 82.4 72 56.9
Gohir.D12G215800 Gossypium hirsutum HOM05D004322 ORTHO05D005033 4.0e-13 77.8 70 58.6
CSS0031640 Camellia sinensis var. sinensis HOM05D004322 ORTHO05D005033 2.0e-12 75.5 50 70.0
Medtr2g007855 Medicago truncatula HOM05D004322 ORTHO05D005033 5.8e-12 73.9 57 59.6
AagrBONN_evm.TU.Sc2ySwM_228.2369 Anthoceros agrestis HOM05D004322 ORTHO05D005033 1.9e-10 68.9 72 48.6
Mapoly0036s0096 Marchantia polymorpha HOM05D004322 ORTHO05D005033 2.4e-10 68.6 72 47.2
CBR_g26281 Chara braunii HOM05D004322 ORTHO05D005033 1.6e-09 65.9 72 47.2
CBR_g4180 Chara braunii HOM05D004322 ORTHO05D005033 1.6e-09 65.9 72 47.2
SEGI_23686 Sequoiadendron giganteum HOM05D004322 ORTHO05D005033 3.5e-09 64.7 70 51.4
Medtr0153s0060 Medicago truncatula HOM05D004322 ORTHO05D005033 6.0e-09 63.9 132 34.8
SMO353G0429 Selaginella moellendorffii HOM05D004322 ORTHO05D005033 7.8e-09 63.5 72 47.2
Nitab4.5_0003071g0090 Nicotiana tabacum HOM05D004322 ORTHO05D005033 2.3e-08 62.0 40 77.5
Pp3c14_8990 Physcomitrium patens HOM05D004322 ORTHO05D005033 2.3e-08 62.0 73 45.2
Dinv19343 Davidia involucrata HOM05D004322 ORTHO05D005033 3.0e-08 61.6 75 45.3
TPR.G19742 Trifolium pratense HOM05D004322 ORTHO05D005033 3.6e-06 54.7 40 65.0


User provided reference genes

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