Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 6.6e-193 677.2 336 100.0
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 1.0e-137 493.8 309 76.7
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 1.8e-137 493.0 312 75.6
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 3.9e-137 491.9 323 73.7
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 6.7e-137 491.1 313 75.1
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 3.3e-136 488.8 308 75.3
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 3.3e-136 488.8 323 73.7
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 9.7e-136 487.3 308 74.7
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 2.4e-134 482.6 313 72.8
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 3.5e-133 478.8 324 71.3
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 4.5e-133 478.4 310 74.2
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 1.3e-132 476.9 324 72.5
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 1.3e-132 476.9 313 72.2
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 8.5e-132 474.2 313 70.3
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 3.0e-129 465.7 313 70.0
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 3.0e-129 465.7 315 69.8
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 8.8e-129 464.2 308 70.5
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 1.1e-128 463.8 323 67.8
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 2.0e-128 463.0 313 69.3
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 4.4e-128 461.8 313 70.0
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 7.4e-128 461.1 313 68.1
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 7.4e-128 461.1 313 68.1
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 7.4e-128 461.1 315 67.9
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 1.3e-127 460.3 343 65.6
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 6.3e-127 458.0 313 68.4
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 1.1e-126 457.2 308 68.2
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 4.1e-126 455.3 323 64.7
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 1.3e-124 450.3 315 69.5
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 3.8e-124 448.7 313 66.8
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 1.5e-123 446.8 313 66.5
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 1.9e-123 446.4 313 68.7
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 3.2e-123 445.7 313 67.1
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 9.4e-123 444.1 308 68.2
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.6e-122 442.2 313 66.5
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 3.6e-122 442.2 313 67.4
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 1.0e-121 440.7 313 65.5
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 1.4e-121 440.3 309 66.7
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 1.4e-121 440.3 308 66.9
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.0e-121 439.1 313 66.1
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 4.0e-121 438.7 308 68.5
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 2.0e-120 436.4 313 65.2
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 2.2e-119 433.0 308 64.6
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 1.1e-118 430.6 309 67.0
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 1.8e-118 429.9 382 57.6
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 2.4e-118 429.5 308 66.2
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 4.1e-118 428.7 309 63.4
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 4.1e-118 428.7 309 63.4
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 4.1e-118 428.7 313 66.8
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 5.3e-118 428.3 323 64.7
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 7.0e-118 427.9 313 63.9
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 2.0e-117 426.4 313 64.5
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 3.5e-117 425.6 313 66.1
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 4.5e-117 425.2 324 63.0
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 7.7e-117 424.5 324 63.3
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 2.2e-116 422.9 323 61.9
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 2.2e-116 422.9 309 66.3
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 5.0e-116 421.8 285 71.6
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 1.9e-115 419.9 323 61.6
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 1.9e-115 419.9 310 63.9
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 2.5e-115 419.5 317 63.4
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 3.2e-115 419.1 309 64.7
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 7.2e-115 417.9 323 60.7
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 3.6e-114 415.6 323 63.8
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 8.0e-114 414.5 323 60.4
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 1.3e-111 407.1 309 60.2
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 1.7e-111 406.8 313 61.0
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 2.2e-111 406.4 323 61.6
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 2.8e-111 406.0 329 59.6
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 3.7e-111 405.6 323 60.1
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 3.7e-111 405.6 323 60.1
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 4.8e-111 405.2 314 65.9
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 6.3e-111 404.8 323 60.1
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 1.4e-110 403.7 323 59.8
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 1.8e-110 403.3 323 59.8
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 3.1e-110 402.5 308 60.7
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 9.1e-110 401.0 399 51.6
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 2.0e-109 399.8 316 60.1
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 3.5e-109 399.1 313 62.9
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 1.3e-108 397.1 323 58.8
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 6.6e-108 394.8 323 57.9
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 2.1e-106 389.8 323 57.0
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 2.8e-106 389.4 323 57.0
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 2.8e-106 389.4 323 57.0
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 3.6e-106 389.0 323 56.7
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 1.0e-105 387.5 309 61.2
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 1.8e-105 386.7 323 57.0
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 2.2e-103 379.8 270 66.7
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 3.7e-103 379.0 308 57.5
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 1.8e-102 376.7 328 55.8
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 8.6e-100 367.9 283 61.5
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 7.8e-93 344.7 232 73.3
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.9e-91 340.1 325 53.8
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 1.6e-90 337.0 315 55.9
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 1.8e-89 333.6 323 52.0
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 2.6e-80 303.1 300 48.7
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 7.1e-78 295.0 208 69.7
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 5.1e-76 288.9 262 57.3
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 1.6e-66 257.3 182 67.0
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 6.0e-61 238.8 186 63.4
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 3.2e-54 216.5 197 54.8
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 3.7e-50 203.0 312 38.1
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 7.6e-48 195.3 152 67.1
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 4.6e-45 186.0 137 68.6
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.8e-44 184.1 150 64.0
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.8e-44 184.1 150 64.0
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 1.1e-43 181.4 272 37.5
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 3.3e-11 73.6 47 76.6
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 4.4e-11 73.2 42 85.7
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 2.2e-10 70.9 42 81.0
Nitab4.5_0004050g0040 Nicotiana tabacum HOM05D007119 ORTHO05D284832 7.2e-06 55.8 160 31.2
Nitab4.5_0004571g0030 Nicotiana tabacum HOM05D007119 ORTHO05D284614 7.2e-06 55.8 128 34.4


User provided reference genes

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