Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012608.1 Olea europaea HOM05D003733 ORTHO05D004035 7.6e-75 283.9 157 100.0
Oeu054741.2 Olea europaea HOM05D003733 ORTHO05D004035 1.0e-26 124.0 91 72.5
Oeu054739.1 Olea europaea HOM05D003733 ORTHO05D004035 2.9e-26 122.5 91 72.5
MSTRG.3501 Avicennia marina HOM05D003733 ORTHO05D004035 1.2e-19 100.5 89 68.5
SGA_v2.0_scaffold13G06400 Striga asiatica HOM05D003733 ORTHO05D004035 4.5e-19 98.6 89 57.3
Cc07_g07720 Coffea canephora HOM05D003733 ORTHO05D004035 3.3e-17 92.4 96 57.3
SalBow5G1957 Salvia bowleyana HOM05D003733 ORTHO05D004035 4.2e-17 92.0 85 63.5
Peaxi162Scf00118g00109 Petunia axillaris HOM05D003733 ORTHO05D004035 7.2e-17 91.3 94 61.7
PGSC0003DMG400030618 Solanum tuberosum HOM05D003733 ORTHO05D004035 9.5e-17 90.9 90 61.1
Nitab4.5_0000396g0250 Nicotiana tabacum HOM05D003733 ORTHO05D004035 1.6e-16 90.1 89 61.8
Lj4A174T33 Lonicera japonica HOM05D003733 ORTHO05D004035 2.8e-16 89.4 89 60.7
Nitab4.5_0000465g0130 Nicotiana tabacum HOM05D003733 ORTHO05D004035 8.0e-16 87.8 89 64.0
Nitab4.5_0014307g0010 Nicotiana tabacum HOM05D003733 ORTHO05D004035 8.0e-16 87.8 89 64.0
QL06p037705 Quercus lobata HOM05D003733 ORTHO05D004035 8.0e-16 87.8 87 57.5
PGSC0003DMG400016686 Solanum tuberosum HOM05D003733 ORTHO05D004035 8.0e-16 87.8 92 63.0
Migut.L00442 Erythranthe guttata HOM05D003733 ORTHO05D004035 2.3e-15 86.3 62 74.2
Lsat_1_v5_gn_8_34760 Lactuca sativa HOM05D003733 ORTHO05D004035 2.3e-15 86.3 80 63.8
SalBow7G4044 Salvia bowleyana HOM05D003733 ORTHO05D004035 3.0e-15 85.9 106 51.9
HanXRQChr12g0366081 Helianthus annuus HOM05D003733 ORTHO05D004035 5.2e-15 85.1 84 60.7
Solyc03g043760.4 Solanum lycopersicum HOM05D003733 ORTHO05D004035 5.2e-15 85.1 92 62.0
Sopen03g007620 Solanum pennellii HOM05D003733 ORTHO05D004035 5.2e-15 85.1 92 62.0
Sopen02g036340 Solanum pennellii HOM05D003733 ORTHO05D004035 1.2e-14 84.0 90 56.7
Actinidia36390 Actinidia chinensis HOM05D003733 ORTHO05D004035 1.5e-14 83.6 89 57.3
Dinv26992 Davidia involucrata HOM05D003733 ORTHO05D004035 1.5e-14 83.6 87 60.9
Solyc02g091730.3 Solanum lycopersicum HOM05D003733 ORTHO05D004035 2.0e-14 83.2 89 55.1
CAN.G11.21 Capsicum annuum HOM05D003733 ORTHO05D004035 2.6e-14 82.8 90 58.9
SGA_v2.0_scaffold174G39242 Striga asiatica HOM05D003733 ORTHO05D004035 9.8e-14 80.9 60 66.7
HanXRQChr17g0561681 Helianthus annuus HOM05D003733 ORTHO05D004035 1.7e-13 80.1 84 59.5
Actinidia11935 Actinidia chinensis HOM05D003733 ORTHO05D004035 3.7e-13 79.0 89 55.1
CAN.G630.65 Capsicum annuum HOM05D003733 ORTHO05D004035 3.7e-13 79.0 237 31.6
CSS0008611 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 8.3e-13 77.8 91 53.8
Potri.005G148700 Populus trichocarpa HOM05D003733 ORTHO05D004035 1.8e-12 76.6 90 55.6
vmacro07413 Vaccinium macrocarpon HOM05D003733 ORTHO05D004035 1.8e-12 76.6 95 48.4
Prupe.6G211200 Prunus persica HOM05D003733 ORTHO05D004035 3.1e-12 75.9 78 56.4
CAN.G1061.16 Capsicum annuum HOM05D003733 ORTHO05D004035 4.1e-12 75.5 89 50.6
GSVIVG01003708001 Vitis vinifera HOM05D003733 ORTHO05D004035 5.4e-12 75.1 93 49.5
Haze_03945 Corylus avellana HOM05D003733 ORTHO05D004035 7.0e-12 74.7 60 73.3
PSO210G1228 Papaver somniferum HOM05D003733 ORTHO05D004035 1.6e-11 73.6 80 53.8
PSO832G4530 Papaver somniferum HOM05D003733 ORTHO05D004035 2.0e-11 73.2 78 52.6
TWI53G0148 Tripterygium wilfordii HOM05D003733 ORTHO05D004035 2.0e-11 73.2 76 59.2
Nitab4.5_0000093g0190 Nicotiana tabacum HOM05D003733 ORTHO05D004035 2.7e-11 72.8 68 64.7
PGR102G0988 Punica granatum HOM05D003733 ORTHO05D004035 2.7e-11 72.8 78 52.6
Thecc.01G082000 Theobroma cacao HOM05D003733 ORTHO05D004035 2.7e-11 72.8 76 59.2
Cfa006814 Carpinus fangiana HOM05D003733 ORTHO05D004035 5.9e-11 71.6 154 38.3
DCAR_025843 Daucus carota HOM05D003733 ORTHO05D004035 7.8e-11 71.2 88 53.4
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 7.8e-11 71.2 86 53.5
vmacro20437 Vaccinium macrocarpon HOM05D003733 ORTHO05D004035 7.8e-11 71.2 89 50.6
arahy.Tifrunner.gnm1.ann1.DCX0GA Arachis hypogaea HOM05D003733 ORTHO05D004035 1.0e-10 70.9 84 53.6
arahy.Tifrunner.gnm1.ann1.KS8TVJ Arachis hypogaea HOM05D003733 ORTHO05D004035 1.0e-10 70.9 84 53.6
MD01G1046400 Malus domestica HOM05D003733 ORTHO05D004035 1.0e-10 70.9 108 48.1
unitig_0.g2606 Utricularia gibba HOM05D003733 ORTHO05D004035 1.0e-10 70.9 67 56.7
Aqoxy4G03244 Aquilegia oxysepala HOM05D003733 ORTHO05D004035 1.3e-10 70.5 77 53.2
CDE10G0903 Ceratophyllum demersum HOM05D003733 ORTHO05D004035 1.3e-10 70.5 63 65.1
PSO761G0336 Papaver somniferum HOM05D003733 ORTHO05D004035 1.3e-10 70.5 78 52.6
Duzib147G1539 Durio zibethinus HOM05D003733 ORTHO05D004035 1.7e-10 70.1 76 60.5
Sed0014908 Sechium edule HOM05D003733 ORTHO05D004035 1.7e-10 70.1 127 40.2
ClCG01G018090 Citrullus lanatus HOM05D003733 ORTHO05D008786 2.3e-10 69.7 48 75.0
CiPaw.12G004100 Carya illinoinensis HOM05D003733 ORTHO05D004035 3.8e-10 68.9 90 52.2
TPR.G1045 Trifolium pratense HOM05D003733 ORTHO05D008786 3.8e-10 68.9 84 51.2
CDE10G0649 Ceratophyllum demersum HOM05D003733 ORTHO05D004035 5.0e-10 68.6 63 68.3
Duzib264G0286 Durio zibethinus HOM05D003733 ORTHO05D004035 5.0e-10 68.6 76 59.2
arahy.Tifrunner.gnm1.ann1.24SHUP Arachis hypogaea HOM05D003733 ORTHO05D004035 6.6e-10 68.2 86 53.5
Lj2g0016248 Lotus japonicus HOM05D003733 ORTHO05D004035 6.6e-10 68.2 87 54.0
PSO782G1301 Papaver somniferum HOM05D003733 ORTHO05D004035 8.6e-10 67.8 78 48.7
Cpa.g.sc129.28 Carica papaya HOM05D003733 ORTHO05D004035 1.1e-09 67.4 62 59.7
MELO3C007686.2 Cucumis melo HOM05D003733 ORTHO05D004035 1.1e-09 67.4 63 65.1
Manes.13G105200 Manihot esculenta HOM05D003733 ORTHO05D004035 1.1e-09 67.4 57 59.6
Manes.12G120000 Manihot esculenta HOM05D003733 ORTHO05D004035 1.5e-09 67.0 78 53.8
MD16G1281700 Malus domestica HOM05D003733 ORTHO05D004035 1.9e-09 66.6 88 51.1
Psat2g135720 Pisum sativum HOM05D003733 ORTHO05D004035 1.9e-09 66.6 84 50.0
Aa31LG7G14100 Aethionema arabicum HOM05D003733 ORTHO05D004035 2.5e-09 66.2 88 46.6
Gohir.D03G033400 Gossypium hirsutum HOM05D003733 ORTHO05D004035 2.5e-09 66.2 78 56.4
Gorai.003G035000 Gossypium raimondii HOM05D003733 ORTHO05D004035 2.5e-09 66.2 78 56.4
Nn1g05776 Nelumbo nucifera HOM05D003733 ORTHO05D004035 2.5e-09 66.2 76 47.4
arahy.Tifrunner.gnm1.ann1.EGH0HL Arachis hypogaea HOM05D003733 ORTHO05D004035 3.3e-09 65.9 86 52.3
Ciclev10025536m.g Citrus clementina HOM05D003733 ORTHO05D004035 3.3e-09 65.9 116 38.8
FvH4_1g18820 Fragaria vesca HOM05D003733 ORTHO05D004035 3.3e-09 65.9 68 67.6
FAN19G3013 Fragaria x ananassa HOM05D003733 ORTHO05D004035 3.3e-09 65.9 68 67.6
FAN23G1272 Fragaria x ananassa HOM05D003733 ORTHO05D004035 3.3e-09 65.9 68 67.6
CiPaw.12G004300 Carya illinoinensis HOM05D003733 ORTHO05D004035 4.3e-09 65.5 141 42.6
Ca_06073_v3 Cicer arietinum L. HOM05D003733 ORTHO05D004035 4.3e-09 65.5 84 48.8
Phvul.002G139100 Phaseolus vulgaris HOM05D003733 ORTHO05D004035 4.3e-09 65.5 84 51.2
Potri.007G009700 Populus trichocarpa HOM05D003733 ORTHO05D004035 4.3e-09 65.5 74 52.7
RcHm_v2.0_Chr2g0109681 Rosa chinensis HOM05D003733 ORTHO05D004035 4.3e-09 65.5 85 49.4
Sed0009716 Sechium edule HOM05D003733 ORTHO05D004035 4.3e-09 65.5 47 74.5
CsaV3_6G044630 Cucumis sativus L. HOM05D003733 ORTHO05D004035 7.3e-09 64.7 154 39.6
Eucgr.D00182 Eucalyptus grandis HOM05D003733 ORTHO05D004035 7.3e-09 64.7 88 46.6
Gohir.A02G147000 Gossypium hirsutum HOM05D003733 ORTHO05D004035 7.3e-09 64.7 78 55.1
TAR625G0952 Trochodendron aralioides HOM05D003733 ORTHO05D004035 7.3e-09 64.7 79 53.2
Dinv36994 Davidia involucrata HOM05D003733 ORTHO05D004035 9.5e-09 64.3 66 62.1
Medtr5g030610 Medicago truncatula HOM05D003733 ORTHO05D004035 9.5e-09 64.3 75 49.3
Medtr5g430710 Medicago truncatula HOM05D003733 ORTHO05D008786 9.5e-09 64.3 75 49.3
Atru.chr3.1125_Atru.chr3.1126 Acer truncatum HOM05D003733 ORTHO05D004035 1.2e-08 63.9 84 47.6
Atru.chr3.1134_Atru.chr3.1135 Acer truncatum HOM05D003733 ORTHO05D004035 1.2e-08 63.9 84 47.6
CSS0006986 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 1.6e-08 63.5 43 67.4
Glyma.08G272800 Glycine max HOM05D003733 ORTHO05D004035 1.6e-08 63.5 86 48.8
Glyma.01G097200 Glycine max HOM05D003733 ORTHO05D004035 2.1e-08 63.2 88 47.7
Phvul.003G285300 Phaseolus vulgaris HOM05D003733 ORTHO05D004035 2.1e-08 63.2 86 47.7
ATR0584G133 Amborella trichopoda HOM05D003733 ORTHO05D004035 2.8e-08 62.8 89 46.1
MD02G1269400 Malus domestica HOM05D003733 ORTHO05D004035 2.8e-08 62.8 65 61.5
THA.LOC104807653 Tarenaya hassleriana HOM05D003733 ORTHO05D004035 2.8e-08 62.8 81 49.4
Lalb_Chr09g0325721 Lupinus albus HOM05D003733 ORTHO05D004035 3.6e-08 62.4 63 58.7
CSS0020555 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 4.7e-08 62.0 63 55.6
ECA233G0477 Erigeron canadensis HOM05D003733 ORTHO05D004035 4.7e-08 62.0 81 46.9
Hma1.2p1_0723F.1_g208790 Hydrangea macrophylla HOM05D003733 ORTHO05D004035 4.7e-08 62.0 56 67.9
CANSAT01G3253 Cannabis sativa HOM05D003733 ORTHO05D004035 6.1e-08 61.6 88 48.9
unitig_88.g27718 Utricularia gibba HOM05D003733 ORTHO05D004035 6.1e-08 61.6 35 80.0
Lalb_Chr16g0381411 Lupinus albus HOM05D003733 ORTHO05D004035 8.0e-08 61.2 84 46.4
SEGI_29083 Sequoiadendron giganteum HOM05D003733 ORTHO05D004035 8.0e-08 61.2 48 70.8
TAR381G0096 Trochodendron aralioides HOM05D003733 ORTHO05D004035 1.0e-07 60.8 78 51.3
ATR0706G065 Amborella trichopoda HOM05D003733 ORTHO05D004035 1.4e-07 60.5 90 43.3
THA.LOC104804189 Tarenaya hassleriana HOM05D003733 ORTHO05D004035 1.4e-07 60.5 90 47.8
Lj4g0014652 Lotus japonicus HOM05D003733 ORTHO05D004035 1.8e-07 60.1 78 46.2
COL.COLO4_11664 Corchorus olitorius HOM05D000513 ORTHO05D008786 3.0e-07 59.3 77 50.6
Lj3g0005458 Lotus japonicus HOM05D003733 ORTHO05D004035 3.0e-07 59.3 84 45.2
Sc03g0000640 Simmondsia chinensis HOM05D003733 ORTHO05D004035 3.0e-07 59.3 79 49.4
VMungo0251G1204 Vigna mungo HOM05D003733 ORTHO05D004035 3.0e-07 59.3 86 46.5
VMungo1309G1560 Vigna mungo HOM05D003733 ORTHO05D004035 3.0e-07 59.3 86 45.3
Carub.0004s0185 Capsella rubella HOM05D003733 ORTHO05D004035 5.2e-07 58.5 87 48.3
Hund23622 Selenicereus undatus HOM05D003733 ORTHO05D004035 5.2e-07 58.5 74 50.0
SEGI_33741 Sequoiadendron giganteum HOM05D003733 ORTHO05D004035 5.2e-07 58.5 62 58.1
VMungo1215G3108 Vigna mungo HOM05D003733 ORTHO05D004035 5.2e-07 58.5 126 36.5
Thhalv10026061m.g Eutrema salsugineum HOM05D003733 ORTHO05D004035 6.8e-07 58.2 53 62.3
MBI16_g41329_MAGBIO Magnolia biondii HOM05D003733 ORTHO05D004035 1.2e-06 57.4 41 78.0
AL4G12240 Arabidopsis lyrata HOM05D003733 ORTHO05D004035 1.5e-06 57.0 73 50.7
Sabra07G0007400 Salix brachista HOM05D003733 ORTHO05D008786 1.5e-06 57.0 109 39.4
C08p40430 Brassica napus HOM05D003733 ORTHO05D004035 2.0e-06 56.6 61 52.5
BolC8t51612H Brassica oleracea HOM05D003733 ORTHO05D004035 2.0e-06 56.6 61 52.5
BraA09t41127Z Brassica rapa HOM05D003733 ORTHO05D004035 2.0e-06 56.6 61 52.5
CARHR114000 Cardamine hirsuta HOM05D003733 ORTHO05D004035 2.0e-06 56.6 88 42.0
MBI16_g20893_MAGBIO Magnolia biondii HOM05D003733 ORTHO05D004035 2.6e-06 56.2 77 44.2
TAR376G0930 Trochodendron aralioides HOM05D003733 ORTHO05D004035 2.6e-06 56.2 162 35.8
BcaB06g27818 Brassica carinata HOM05D003733 ORTHO05D004035 5.8e-06 55.1 52 57.7
A01p01170 Brassica napus HOM05D003733 ORTHO05D004035 9.8e-06 54.3 80 48.8


User provided reference genes

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