Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 1.9e-171 605.9 344 100.0
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 2.6e-120 436.0 348 71.8
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 1.7e-79 300.4 352 55.4
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 4.4e-75 285.8 339 52.5
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 2.8e-74 283.1 341 56.0
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 5.6e-70 268.9 358 53.9
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 5.6e-70 268.9 344 54.4
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 3.6e-69 266.2 358 54.7
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 8.0e-69 265.0 344 52.3
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 1.0e-68 264.6 335 54.3
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 3.4e-67 259.6 368 50.0
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 3.4e-67 259.6 360 49.2
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 1.3e-66 257.7 337 55.5
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 4.9e-66 255.8 375 48.5
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 8.3e-66 255.0 350 50.9
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 2.4e-65 253.4 352 51.7
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 3.2e-65 253.1 356 50.8
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 7.0e-65 251.9 345 54.8
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 4.6e-64 249.2 342 54.4
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 5.9e-64 248.8 355 51.3
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 3.9e-63 246.1 343 56.3
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.1e-62 244.6 352 50.9
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 1.9e-62 243.8 334 52.1
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 3.3e-62 243.0 334 52.1
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 7.3e-62 241.9 342 51.5
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.2e-61 241.1 351 49.6
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.2e-61 241.1 340 51.2
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 2.1e-61 240.4 350 48.0
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 2.8e-61 240.0 358 50.0
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 3.6e-61 239.6 359 52.6
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 6.2e-61 238.8 344 47.7
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 8.0e-61 238.4 341 53.1
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 1.0e-60 238.0 341 47.5
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 3.1e-60 236.5 346 53.2
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 6.8e-60 235.3 342 48.8
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 2.0e-59 233.8 336 53.6
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 4.4e-59 232.6 359 48.5
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 5.8e-59 232.3 359 51.8
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 8.3e-58 228.4 349 50.4
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 2.4e-57 226.9 361 46.5
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 2.4e-57 226.9 349 47.3
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 4.1e-57 226.1 340 47.1
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 5.4e-57 225.7 337 47.8
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 2.7e-56 223.4 341 50.1
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 4.6e-56 222.6 330 47.9
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 6.0e-56 222.2 359 45.4
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 6.0e-56 222.2 332 46.7
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 7.8e-56 221.9 334 46.4
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 2.3e-55 220.3 350 47.4
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 1.1e-54 218.0 344 50.9
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 1.1e-54 218.0 349 48.1
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 1.9e-54 217.2 349 47.6
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 1.9e-54 217.2 332 46.7
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 4.3e-54 216.1 349 48.7
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 6.2e-53 212.2 293 50.9
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 8.1e-53 211.8 349 48.7
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 5.2e-52 209.1 347 46.1
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 5.2e-52 209.1 328 47.0
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 1.2e-51 208.0 346 44.5
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 2.6e-51 206.8 311 46.6
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 3.4e-51 206.5 352 45.5
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 5.8e-51 205.7 332 46.1
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 7.5e-51 205.3 346 47.7
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 9.8e-51 204.9 333 47.1
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 2.2e-50 203.8 339 44.5
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 1.1e-49 201.4 360 45.3
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.9e-49 200.7 333 47.7
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 7.1e-49 198.7 340 47.4
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 9.2e-49 198.4 341 48.4
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.6e-48 197.6 337 48.7
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 2.7e-48 196.8 350 47.7
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 2.7e-48 196.8 350 45.4
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 3.5e-48 196.4 336 42.9
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 3.5e-48 196.4 346 44.2
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 6.0e-48 195.7 340 48.8
COL.COLO4_21910 Corchorus olitorius HOM05D003676 ORTHO05D004262 7.8e-48 195.3 353 43.1
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 1.3e-47 194.5 351 43.9
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 1.5e-46 191.0 336 42.6
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.9e-46 190.7 333 43.5
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 2.5e-46 190.3 340 43.8
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 2.5e-46 190.3 343 46.6
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 3.6e-45 186.4 333 47.7
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 4.7e-45 186.0 260 50.0
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 4.7e-45 186.0 331 44.1
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 8.1e-45 185.3 350 45.1
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 1.8e-44 184.1 338 45.6
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.3e-44 183.7 333 47.1
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 4.0e-44 183.0 341 43.7
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 5.2e-44 182.6 339 44.8
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 5.2e-44 182.6 257 49.4
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 2.6e-43 180.3 333 42.3
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 5.8e-43 179.1 336 41.4
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 9.9e-43 178.3 333 39.9
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 4.9e-42 176.0 352 39.2
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.9e-42 176.0 333 45.9
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 6.4e-42 175.6 337 45.7
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 1.1e-41 174.9 341 43.1
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.1e-41 174.9 333 45.9
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 1.4e-41 174.5 348 40.2
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 3.2e-41 173.3 339 41.0
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 3.2e-41 173.3 326 42.3
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 4.1e-41 172.9 330 42.7
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 7.1e-41 172.2 371 37.2
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 2.7e-40 170.2 337 47.5
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 3.5e-40 169.9 241 46.1
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 3.5e-40 169.9 334 41.6
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 4.6e-40 169.5 329 40.7
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 6.0e-40 169.1 326 41.1
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 1.3e-39 167.9 334 45.5
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 1.7e-39 167.5 218 50.5
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.7e-39 167.5 335 44.5
Potri.007G057800 Populus trichocarpa HOM05D003676 ORTHO05D004262 1.7e-39 167.5 357 41.7
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 2.3e-39 167.2 331 45.6
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 3.0e-39 166.8 334 45.5
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 3.0e-39 166.8 334 45.2
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 8.6e-39 165.2 184 57.1
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 4.3e-38 162.9 308 45.8
unitig_899.g14713 Utricularia gibba HOM05D003676 ORTHO05D004262 5.6e-38 162.5 289 41.9
HanXRQChr15g0487251 Helianthus annuus HOM05D003676 ORTHO05D004262 3.6e-37 159.8 335 39.7
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.4e-36 157.9 434 37.1
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 2.6e-35 153.7 300 43.0
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 5.8e-35 152.5 321 39.3
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 9.9e-35 151.8 327 37.3
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 1.3e-34 151.4 339 37.8
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 2.9e-34 150.2 336 43.2
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 6.4e-34 149.1 426 36.2
Migut.H01153 Erythranthe guttata HOM05D003676 ORTHO05D004262 3.2e-33 146.7 348 40.2
PGSC0003DMG400023891 Solanum tuberosum HOM05D003676 ORTHO05D004262 1.2e-32 144.8 288 42.4
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 1.2e-32 144.8 354 42.7
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 3.5e-32 143.3 282 41.1
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 6.0e-32 142.5 428 36.7
ECA246G1385 Erigeron canadensis HOM05D003676 ORTHO05D004262 7.8e-32 142.1 241 45.2
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 1.7e-31 141.0 351 37.3
ATR0149G006 Amborella trichopoda HOM05D003676 ORTHO05D004262 1.5e-30 137.9 350 42.0
Solyc02g062170.3 Solanum lycopersicum HOM05D003676 ORTHO05D004262 3.6e-29 133.3 287 40.4
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 6.2e-29 132.5 338 34.6
Zm00001eb024930 Zea mays HOM05D003676 ORTHO05D004262 8.1e-29 132.1 355 39.2
Zm00001eb224920 Zea mays HOM05D003676 ORTHO05D004262 1.1e-28 131.7 353 40.2
AT3G51230 Arabidopsis thaliana HOM05D003676 ORTHO05D004262 1.4e-28 131.3 212 44.8
Os10g0577400 Oryza sativa ssp. japonica HOM05D003676 ORTHO05D004262 1.8e-28 131.0 350 39.7
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 3.1e-28 130.2 348 41.7
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 6.9e-28 129.0 305 40.0
SHI32179 Sapria himalayana HOM05D003676 ORTHO05D004262 9.0e-28 128.6 315 37.1
Sopen02g013140 Solanum pennellii HOM05D003676 ORTHO05D004262 2.0e-27 127.5 287 39.4
Nitab4.5_0002337g0030 Nicotiana tabacum HOM05D003676 ORTHO05D004262 5.8e-27 125.9 221 47.1
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 9.9e-27 125.2 328 38.1
Nitab4.5_0000188g0110 Nicotiana tabacum HOM05D003676 ORTHO05D004262 9.9e-27 125.2 217 47.0
AL5G31630 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 2.2e-26 124.0 264 38.6
CARHR160810 Cardamine hirsuta HOM05D003676 ORTHO05D004262 2.2e-26 124.0 227 42.3
DCAR_025998 Daucus carota HOM05D003676 ORTHO05D004262 6.4e-26 122.5 253 40.3
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 7.1e-25 119.0 331 38.7
BcaNung00393 Brassica carinata HOM05D003676 ORTHO05D004262 2.7e-24 117.1 214 44.4
SEGI_09532 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 4.6e-24 116.3 340 35.9
BcaC09g50089 Brassica carinata HOM05D003676 ORTHO05D004262 6.0e-24 115.9 244 40.2
C01p29220 Brassica napus HOM05D003676 ORTHO05D004262 6.0e-24 115.9 244 40.2
SEGI_21114 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 6.0e-24 115.9 330 35.8
A01p23560 Brassica napus HOM05D003676 ORTHO05D004262 1.7e-23 114.4 212 41.0
BraA01t02262Z Brassica rapa HOM05D003676 ORTHO05D004262 1.7e-23 114.4 212 41.0
Lalb_Chr09g0321731 Lupinus albus HOM05D003676 ORTHO05D004262 3.9e-23 113.2 329 34.0
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 1.5e-22 111.3 271 39.1
Carub.0005s1760 Capsella rubella HOM05D003676 ORTHO05D004262 2.5e-22 110.5 231 41.6
Atru.chr1.3640 Acer truncatum HOM05D003676 ORTHO05D004262 1.2e-19 101.7 138 52.9
vmacro23249 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.2e-19 101.7 223 41.3
vmacro23473 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.2e-19 101.7 223 41.3
HanXRQChr16g0531461 Helianthus annuus HOM05D003676 ORTHO05D004262 3.4e-19 100.1 213 37.1
RcHm_v2.0_Chr6g0272671 Rosa chinensis HOM05D003676 ORTHO05D004262 9.9e-19 98.6 135 48.9
BcaNung04494 Brassica carinata HOM05D003676 ORTHO05D004262 3.5e-16 90.1 236 39.4
Gorai.010G060700 Gossypium raimondii HOM05D003676 ORTHO05D004262 3.0e-15 87.0 130 52.3
SEGI_24904 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 1.0e-10 72.0 292 29.1
Atru.chr1.3647 Acer truncatum HOM05D003676 ORTHO05D004262 1.7e-10 71.2 219 37.0
Gohir.D09G239350 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.9e-10 69.7 57 61.4
Gorai.006G262100 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.1e-09 68.6 57 59.6
vmacro22131 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.4e-09 68.2 221 33.9
Nn1g06616 Nelumbo nucifera HOM05D003676 ORTHO05D004262 7.1e-09 65.9 114 50.0
TAR629G3197 Trochodendron aralioides HOM05D003676 ORTHO05D004262 3.9e-07 60.1 114 40.4
Mapoly0004s0127 Marchantia polymorpha HOM05D003676 ORTHO05D030105 6.7e-07 59.3 449 24.9
PSO700G0244 Papaver somniferum HOM05D065651 ORTHO05D004262 1.9e-06 57.8 256 28.5


User provided reference genes

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