Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012525.1 Olea europaea HOM05D005127 ORTHO05D006022 9.4e-220 766.5 381 100.0
Oeu039702.1 Olea europaea HOM05D005127 ORTHO05D006022 3.4e-193 678.3 379 86.5
MSTRG.15431 Avicennia marina HOM05D005127 ORTHO05D006022 2.2e-136 489.6 381 65.6
SGA_v2.0_scaffold135G34932 Striga asiatica HOM05D005127 ORTHO05D006022 6.0e-134 481.5 379 66.8
CAN.G404.4 Capsicum annuum HOM05D005127 ORTHO05D006022 2.4e-130 469.5 378 64.6
Nitab4.5_0004645g0030 Nicotiana tabacum HOM05D005127 ORTHO05D006022 2.0e-129 466.5 378 64.3
Cc07_g12800 Coffea canephora HOM05D005127 ORTHO05D006022 1.7e-128 463.4 379 63.6
Sopen03g005720 Solanum pennellii HOM05D005127 ORTHO05D006022 2.9e-128 462.6 381 64.3
Nitab4.5_0000091g0380 Nicotiana tabacum HOM05D005127 ORTHO05D006022 6.5e-128 461.5 378 63.5
Solyc03g031850.1 Solanum lycopersicum HOM05D005127 ORTHO05D006022 1.4e-127 460.3 381 64.0
PGSC0003DMG400042292 Solanum tuberosum HOM05D005127 ORTHO05D006022 4.2e-127 458.8 382 64.1
Migut.H02248 Erythranthe guttata HOM05D005127 ORTHO05D006022 3.9e-125 452.2 382 62.0
Peaxi162Scf00521g00053 Petunia axillaris HOM05D005127 ORTHO05D006022 1.5e-124 450.3 383 62.4
TAR371G0217 Trochodendron aralioides HOM05D005127 ORTHO05D006022 5.7e-124 448.4 378 62.4
Hma1.2p1_0158F.1_g069660 Hydrangea macrophylla HOM05D005127 ORTHO05D006022 7.4e-124 448.0 378 62.2
CSS0034699 Camellia sinensis var. sinensis HOM05D005127 ORTHO05D006022 6.3e-123 444.9 378 60.3
PGSC0003DMG400016729 Solanum tuberosum HOM05D005127 ORTHO05D006022 1.4e-122 443.7 378 61.4
Glyma.14G210400 Glycine max HOM05D005127 ORTHO05D006022 2.6e-121 439.5 383 59.5
Sopen02g025870 Solanum pennellii HOM05D005127 ORTHO05D006022 2.6e-121 439.5 379 60.9
Rhsim08G0021200 Rhododendron simsii HOM05D005127 ORTHO05D006022 4.5e-121 438.7 379 61.7
Eucgr.H04888 Eucalyptus grandis HOM05D005127 ORTHO05D006022 2.9e-120 436.0 385 60.3
VMungo0647G1176 Vigna mungo HOM05D005127 ORTHO05D006022 6.5e-120 434.9 383 59.8
Potri.017G139800 Populus trichocarpa HOM05D005127 ORTHO05D006022 7.2e-119 431.4 381 59.3
ClCG05G011360 Citrullus lanatus HOM05D005127 ORTHO05D006022 1.2e-118 430.6 383 59.0
MELO3C020241.2 Cucumis melo HOM05D005127 ORTHO05D006022 1.2e-118 430.6 383 59.0
CsaV3_3G021100 Cucumis sativus L. HOM05D005127 ORTHO05D006022 1.6e-118 430.3 383 59.0
Glyma.02G240800 Glycine max HOM05D005127 ORTHO05D006022 3.6e-118 429.1 387 59.4
PSO729G0281 Papaver somniferum HOM05D005127 ORTHO05D006022 4.6e-118 428.7 381 58.5
Atru.chr1.2154 Acer truncatum HOM05D005127 ORTHO05D006022 6.1e-118 428.3 380 59.5
CiPaw.03G076300 Carya illinoinensis HOM05D005127 ORTHO05D006022 7.9e-118 427.9 382 57.9
Ciclev10012019m.g Citrus clementina HOM05D005127 ORTHO05D006022 1.0e-117 427.6 380 58.7
PSO724G0684 Papaver somniferum HOM05D005127 ORTHO05D006022 1.4e-117 427.2 382 57.6
PGR042G2448 Punica granatum HOM05D005127 ORTHO05D006022 1.4e-117 427.2 379 59.1
Nitab4.5_0007410g0020 Nicotiana tabacum HOM05D005127 ORTHO05D006022 1.8e-117 426.8 378 60.8
Sabra04G0053400 Salix brachista HOM05D005127 ORTHO05D006022 6.7e-117 424.9 381 59.1
Cfa007754 Carpinus fangiana HOM05D005127 ORTHO05D006022 8.8e-117 424.5 381 57.7
Phvul.008G240900 Phaseolus vulgaris HOM05D005127 ORTHO05D006022 8.8e-117 424.5 383 58.7
Potri.004G080600 Populus trichocarpa HOM05D005127 ORTHO05D006022 2.0e-116 423.3 380 58.9
SalBow3G2114 Salvia bowleyana HOM05D005127 ORTHO05D006022 2.5e-116 422.9 350 61.7
Haze_14318 Corylus avellana HOM05D005127 ORTHO05D006022 5.7e-116 421.8 381 56.7
SalBow3G1912 Salvia bowleyana HOM05D005127 ORTHO05D006022 5.7e-116 421.8 350 61.7
Sed0023234 Sechium edule HOM05D005127 ORTHO05D006022 5.7e-116 421.8 385 57.4
COL.COLO4_19768 Corchorus olitorius HOM05D005127 ORTHO05D006022 1.7e-115 420.2 384 58.9
Manes.10G079000 Manihot esculenta HOM05D005127 ORTHO05D006022 2.2e-115 419.9 384 56.5
Nitab4.5_0010422g0010 Nicotiana tabacum HOM05D005127 ORTHO05D006022 2.8e-115 419.5 375 60.0
Sabra17G0118000 Salix brachista HOM05D005127 ORTHO05D006022 8.2e-115 417.9 381 57.7
Thecc.04G065100 Theobroma cacao HOM05D005127 ORTHO05D006022 1.4e-114 417.2 383 58.0
Cpa.g.sc178.24 Carica papaya HOM05D005127 ORTHO05D006022 1.7e-112 410.2 384 57.0
Prupe.3G014700 Prunus persica HOM05D005127 ORTHO05D006022 2.2e-112 409.8 389 56.6
MBI06_g13889_MAGBIO Magnolia biondii HOM05D005127 ORTHO05D006022 2.9e-112 409.5 378 56.3
TWI74G1018 Tripterygium wilfordii HOM05D005127 ORTHO05D006022 5.0e-112 408.7 382 56.3
CANSAT21G1480 Cannabis sativa HOM05D005127 ORTHO05D006022 8.5e-112 407.9 381 55.6
CAN.G1681.7 Capsicum annuum HOM05D005127 ORTHO05D006022 8.5e-112 407.9 379 57.8
Lalb_Chr10g0104061 Lupinus albus HOM05D005127 ORTHO05D006022 8.5e-112 407.9 381 55.4
Aqoxy3G04119 Aquilegia oxysepala HOM05D005127 ORTHO05D006022 1.4e-111 407.1 381 55.9
RcHm_v2.0_Chr3g0488741 Rosa chinensis HOM05D005127 ORTHO05D006022 2.7e-110 402.9 383 55.1
Duzib138G1903 Durio zibethinus HOM05D005127 ORTHO05D006022 3.6e-110 402.5 382 56.8
ATR0807G162 Amborella trichopoda HOM05D005127 ORTHO05D006022 4.7e-110 402.1 378 57.4
Dinv19078 Davidia involucrata HOM05D005127 ORTHO05D006022 6.1e-110 401.7 378 57.4
MD09G1279600 Malus domestica HOM05D005127 ORTHO05D006022 1.0e-109 401.0 389 55.8
QL02p064340 Quercus lobata HOM05D005127 ORTHO05D006022 1.0e-109 401.0 370 56.8
Psat2g042880 Pisum sativum HOM05D005127 ORTHO05D006022 1.8e-109 400.2 386 54.7
Gorai.001G083200 Gossypium raimondii HOM05D005127 ORTHO05D006022 3.9e-109 399.1 384 56.0
Gohir.D07G078700 Gossypium hirsutum HOM05D005127 ORTHO05D006022 6.7e-109 398.3 384 55.7
Medtr5g076930 Medicago truncatula HOM05D005127 ORTHO05D006022 6.7e-109 398.3 378 55.0
Lalb_Chr17g0345881 Lupinus albus HOM05D005127 ORTHO05D006022 1.5e-108 397.1 378 54.8
Gohir.A07G074000 Gossypium hirsutum HOM05D005127 ORTHO05D006022 5.7e-108 395.2 384 55.5
FvH4_1g27360 Fragaria vesca HOM05D005127 ORTHO05D006022 2.2e-107 393.3 379 54.6
Aa31LG5G13690 Aethionema arabicum HOM05D005127 ORTHO05D006022 3.7e-107 392.5 386 54.1
FAN19G2113 Fragaria x ananassa HOM05D005127 ORTHO05D006022 4.8e-107 392.1 379 54.4
Ca_05761_v3 Cicer arietinum L. HOM05D005127 ORTHO05D006022 6.3e-107 391.7 378 54.5
CARHR077230 Cardamine hirsuta HOM05D005127 ORTHO05D006022 8.2e-107 391.3 386 54.7
AL3G12820 Arabidopsis lyrata HOM05D005127 ORTHO05D006022 1.1e-106 391.0 386 54.9
AT3G03210 Arabidopsis thaliana HOM05D005127 ORTHO05D006022 1.1e-106 391.0 386 54.9
FAN23G3138 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.1e-106 391.0 380 54.7
Thhalv10020974m.g Eutrema salsugineum HOM05D005127 ORTHO05D006022 1.8e-106 390.2 386 54.1
FAN28G1653 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.8e-106 390.2 379 54.4
FAN28G2393 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.8e-106 390.2 379 54.4
Sp3g02250 Schrenkiella parvula HOM05D005127 ORTHO05D006022 2.4e-106 389.8 386 54.7
FAN26G1075 Fragaria x ananassa HOM05D005127 ORTHO05D006022 7.0e-106 388.3 379 54.1
Carub.0003s0236 Capsella rubella HOM05D005127 ORTHO05D006022 1.5e-105 387.1 386 54.7
Sc09g0004500 Simmondsia chinensis HOM05D005127 ORTHO05D006022 2.6e-105 386.3 383 54.8
TPR.G5353 Trifolium pratense HOM05D005127 ORTHO05D006022 2.6e-105 386.3 384 53.9
LjContig00141g0000865 Lotus japonicus HOM05D005127 ORTHO05D006022 4.5e-105 385.6 378 54.5
HanXRQChr14g0443471 Helianthus annuus HOM05D005127 ORTHO05D006022 5.9e-105 385.2 379 55.9
Lj4P252T15 Lonicera japonica HOM05D005127 ORTHO05D006022 1.7e-104 383.6 363 56.7
GSVIVG01035235001 Vitis vinifera HOM05D005127 ORTHO05D006022 2.2e-104 383.3 379 55.7
BcaC05g30317 Brassica carinata HOM05D005127 ORTHO05D006022 5.0e-104 382.1 384 53.6
Actinidia35707 Actinidia chinensis HOM05D005127 ORTHO05D006022 8.5e-104 381.3 383 55.9
Gorai.002G111000 Gossypium raimondii HOM05D005127 ORTHO05D006022 1.4e-103 380.6 385 54.5
C05p63600 Brassica napus HOM05D005127 ORTHO05D006022 9.4e-103 377.9 385 52.2
BolC5t35029H Brassica oleracea HOM05D005127 ORTHO05D006022 9.4e-103 377.9 385 52.2
Gohir.D01G085400 Gossypium hirsutum HOM05D005127 ORTHO05D006022 1.2e-102 377.5 385 54.0
Gohir.A01G100900 Gossypium hirsutum HOM05D005127 ORTHO05D006022 1.6e-102 377.1 385 54.3
A05p43980 Brassica napus HOM05D005127 ORTHO05D006022 2.1e-102 376.7 379 51.7
BcaC05g30528 Brassica carinata HOM05D005127 ORTHO05D006022 2.7e-102 376.3 385 51.9
BraSC90t46712Z Brassica rapa HOM05D005127 ORTHO05D006022 3.9e-101 372.5 383 51.4
DCAR_003746 Daucus carota HOM05D005127 ORTHO05D006022 4.4e-100 369.0 359 53.2
Lsat_1_v5_gn_2_71721 Lactuca sativa HOM05D005127 ORTHO05D006022 2.0e-97 360.1 369 52.3
AUR62037482 Chenopodium quinoa HOM05D005127 ORTHO05D009825 2.6e-97 359.8 377 54.1
THA.LOC104827223 Tarenaya hassleriana HOM05D005127 ORTHO05D006022 5.0e-96 355.5 386 51.0
Gorai.007G188500 Gossypium raimondii HOM05D005127 ORTHO05D006022 8.8e-93 344.7 383 48.3
Gohir.A11G169700 Gossypium hirsutum HOM05D005127 ORTHO05D006022 2.6e-92 343.2 370 48.9
Zm00001eb393730 Zea mays HOM05D005127 ORTHO05D006022 2.1e-86 323.6 378 47.4
Gohir.D11G175900 Gossypium hirsutum HOM05D005127 ORTHO05D006022 3.6e-86 322.8 381 47.2
Oeu045801.1 Olea europaea HOM05D005127 ORTHO05D006022 1.5e-84 317.4 357 47.6
SHI30090 Sapria himalayana HOM05D005127 ORTHO05D006022 1.1e-82 311.2 375 45.9
ECA238G3642 Erigeron canadensis HOM05D005127 ORTHO05D006022 1.4e-82 310.8 288 54.2
SEGI_34462 Sequoiadendron giganteum HOM05D005127 ORTHO05D006022 4.1e-82 309.3 457 40.3
Os10g0539400 Oryza sativa ssp. japonica HOM05D005127 ORTHO05D006022 2.0e-81 307.0 376 44.7
Migut.H02247 Erythranthe guttata HOM05D005127 ORTHO05D006022 1.7e-80 303.9 357 48.5
Mapoly0003s0310 Marchantia polymorpha HOM05D005127 ORTHO05D006022 2.8e-78 296.6 378 41.8
Zm00001eb022160 Zea mays HOM05D005127 ORTHO05D006022 2.2e-75 287.0 360 45.3
CDE01G0221 Ceratophyllum demersum HOM05D005127 ORTHO05D006022 1.1e-74 284.6 302 48.7
SMO141G0134 Selaginella moellendorffii HOM05D005127 ORTHO05D006022 1.4e-69 267.7 377 41.9
unitig_699.g19573 Utricularia gibba HOM05D005127 ORTHO05D006022 2.0e-68 263.8 231 61.9
Pp3c8_14800 Physcomitrium patens HOM05D005127 ORTHO05D006022 1.7e-64 250.8 377 38.7
CDE02G3442 Ceratophyllum demersum HOM05D005127 ORTHO05D006022 3.9e-64 249.6 379 40.1
Solyc02g081230.4 Solanum lycopersicum HOM05D005127 ORTHO05D006022 1.2e-57 228.0 182 61.5
AUR62004769 Chenopodium quinoa HOM05D005127 ORTHO05D006022 9.5e-55 218.4 198 55.6
HPP92_020636 Vanilla planifolia HOM05D005127 ORTHO05D006022 1.1e-53 214.9 203 48.3
AagrBONN_evm.TU.Sc2ySwM_228.805 Anthoceros agrestis HOM05D005127 ORTHO05D006022 1.1e-50 204.9 250 42.8
AagrBONN_evm.TU.Sc2ySwM_117.2318 Anthoceros agrestis HOM05D005127 ORTHO05D006022 3.6e-46 189.9 243 42.0
Lsat_1_v5_gn_2_6720 Lactuca sativa HOM05D005127 ORTHO05D006022 3.0e-40 170.2 164 53.0
PSO063G7663 Papaver somniferum HOM05D005127 ORTHO05D006022 1.3e-38 164.9 185 52.4
Gorai.009G350000 Gossypium raimondii HOM05D000154 ORTHO05D006022 2.8e-38 163.7 135 57.0
Gorai.004G162300 Gossypium raimondii HOM05D005127 ORTHO05D006022 8.1e-38 162.2 128 60.2
CBR_g39794 Chara braunii HOM05D005127 ORTHO05D006022 9.9e-36 155.2 292 31.2
Lsat_1_v5_gn_5_127001 Lactuca sativa HOM05D005127 ORTHO05D006022 4.2e-34 149.8 145 52.4
Gorai.005G117100 Gossypium raimondii HOM05D005127 ORTHO05D006022 2.1e-33 147.5 132 56.1
Gohir.D05G325801 Gossypium hirsutum HOM05D000154 ORTHO05D006022 3.5e-25 120.2 95 56.8
Gorai.011G105200 Gossypium raimondii HOM05D000154 ORTHO05D006022 3.5e-25 120.2 88 61.4
Gohir.D08G156000 Gossypium hirsutum HOM05D005127 ORTHO05D006022 7.9e-25 119.0 88 61.4
Gorai.002G056700 Gossypium raimondii HOM05D005127 ORTHO05D006022 5.6e-23 112.8 88 60.2
Medtr5g076940 Medicago truncatula HOM05D005127 ORTHO05D006022 1.3e-22 111.7 101 55.4
Gohir.D04G098033 Gossypium hirsutum HOM05D005127 ORTHO05D006022 1.6e-22 111.3 93 58.1
MCO15G483 Micromonas commoda HOM05D005127 ORTHO05D006022 1.6e-22 111.3 282 27.7
RcHm_v2.0_Chr5g0042551 Rosa chinensis HOM05D005127 ORTHO05D006022 3.7e-22 110.2 113 46.9
Gohir.D02G103100 Gossypium hirsutum HOM05D000154 ORTHO05D006022 7.4e-15 85.9 65 60.0
RcHm_v2.0_Chr5g0027411 Rosa chinensis HOM05D005127 ORTHO05D006022 7.4e-15 85.9 233 30.0
Nn2g14442 Nelumbo nucifera HOM05D005127 ORTHO05D006022 2.0e-12 77.8 45 86.7
GSVIVG01034874001 Vitis vinifera HOM05D005127 ORTHO05D006022 5.0e-11 73.2 65 55.4
GSVIVG01000363001 Vitis vinifera HOM05D005127 ORTHO05D006022 6.5e-11 72.8 65 55.4
A09p28600 Brassica napus HOM05D005127 ORTHO05D006022 2.5e-10 70.9 58 60.3
RcHm_v2.0_Chr4g0398381 Rosa chinensis HOM05D005127 ORTHO05D006022 2.5e-10 70.9 60 63.3
GSVIVG01038053001 Vitis vinifera HOM05D005127 ORTHO05D006022 3.5e-09 67.0 59 54.2
vmacro09980 Vaccinium macrocarpon HOM05D000060 ORTHO05D003150 3.9e-08 63.5 101 41.6
AL3G25840 Arabidopsis lyrata HOM05D005127 ORTHO05D006022 1.1e-07 62.0 73 49.3
AL8G37650 Arabidopsis lyrata HOM05D005127 ORTHO05D006022 1.1e-07 62.0 73 49.3
Dinv28241 Davidia involucrata HOM05D005127 ORTHO05D006022 2.8e-06 57.4 127 40.9


User provided reference genes

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