Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012503.1 Olea europaea HOM05D003795 ORTHO05D004308 2.0e-145 519.2 287 100.0
Oeu012502.2 Olea europaea HOM05D003795 ORTHO05D004308 1.1e-95 354.0 258 79.8
Oeu060824.1 Olea europaea HOM05D003795 ORTHO05D004308 5.2e-45 185.7 291 48.5
Nitab4.5_0012787g0030 Nicotiana tabacum HOM05D003795 ORTHO05D004308 3.8e-40 169.5 299 43.5
Oeu041416.1 Olea europaea HOM05D003795 ORTHO05D004308 1.5e-39 167.5 276 45.3
Nitab4.5_0000483g0170 Nicotiana tabacum HOM05D003795 ORTHO05D004308 1.9e-39 167.2 303 43.9
Lj2A509T28 Lonicera japonica HOM05D003795 ORTHO05D004308 1.2e-38 164.5 313 41.9
CAN.G809.93 Capsicum annuum HOM05D003795 ORTHO05D004308 1.0e-37 161.4 314 42.4
PGSC0003DMG400019727 Solanum tuberosum HOM05D003795 ORTHO05D004308 5.7e-36 155.6 318 40.9
Solyc02g081440.4 Solanum lycopersicum HOM05D003795 ORTHO05D004308 7.7e-33 145.2 328 38.4
Dinv28269 Davidia involucrata HOM05D003795 ORTHO05D004308 1.7e-32 144.1 312 41.7
SalBow5G4136 Salvia bowleyana HOM05D003795 ORTHO05D004308 2.2e-32 143.7 279 41.6
Sopen02g026080 Solanum pennellii HOM05D003795 ORTHO05D004308 2.2e-32 143.7 325 38.8
Migut.K01203 Erythranthe guttata HOM05D003795 ORTHO05D004308 9.4e-31 138.3 290 46.2
MSTRG.15619 Avicennia marina HOM05D003795 ORTHO05D004308 8.0e-30 135.2 287 46.0
Cc07_g12620 Coffea canephora HOM05D003795 ORTHO05D004308 8.8e-29 131.7 175 52.6
Hma1.2p1_0085F.1_g043870 Hydrangea macrophylla HOM05D003795 ORTHO05D004308 9.8e-28 128.3 191 50.8
DCAR_014135 Daucus carota HOM05D003795 ORTHO05D004308 1.1e-26 124.8 170 55.3
MSTRG.3665 Avicennia marina HOM05D003795 ORTHO05D004308 9.1e-26 121.7 298 41.6
Peaxi162Scf00344g00199 Petunia axillaris HOM05D003795 ORTHO05D004308 3.5e-25 119.8 302 37.4
SGA_v2.0_scaffold199G41250 Striga asiatica HOM05D003795 ORTHO05D004308 3.5e-25 119.8 296 39.9
Actinidia32996 Actinidia chinensis HOM05D003795 ORTHO05D004308 7.7e-25 118.6 171 49.1
GSVIVG01033197001 Vitis vinifera HOM05D003795 ORTHO05D004308 7.7e-25 118.6 265 40.4
PGSC0003DMG400021472 Solanum tuberosum HOM05D003795 ORTHO05D004308 1.5e-23 114.4 226 44.2
HanXRQChr14g0443551 Helianthus annuus HOM05D003795 ORTHO05D004308 5.5e-23 112.5 285 38.2
Thecc.04G056400 Theobroma cacao HOM05D003795 ORTHO05D004308 1.6e-22 110.9 312 34.9
CSS0049356 Camellia sinensis var. sinensis HOM05D003795 ORTHO05D004308 1.0e-21 108.2 184 45.7
Nitab4.5_0002297g0070 Nicotiana tabacum HOM05D003795 ORTHO05D004308 1.4e-21 107.8 231 41.6
VMungo0647G0124 Vigna mungo HOM05D003795 ORTHO05D004308 4.0e-21 106.3 303 34.7
Sopen02g011820 Solanum pennellii HOM05D003795 ORTHO05D004308 5.2e-21 105.9 223 39.9
vmacro20445 Vaccinium macrocarpon HOM05D003795 ORTHO05D004308 1.5e-20 104.4 309 35.0
Lsat_1_v5_gn_2_72041 Lactuca sativa HOM05D003795 ORTHO05D004308 4.4e-20 102.8 177 44.1
Duzib138G1939 Durio zibethinus HOM05D003795 ORTHO05D004308 7.5e-20 102.1 306 34.6
Phvul.008G243000 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 7.5e-20 102.1 301 35.9
Gorai.007G189400 Gossypium raimondii HOM05D003795 ORTHO05D004308 3.2e-18 96.7 329 32.5
Nitab4.5_0008083g0010 Nicotiana tabacum HOM05D003795 ORTHO05D004308 5.4e-18 95.9 230 37.4
QL02p056567 Quercus lobata HOM05D003795 ORTHO05D004308 7.0e-18 95.5 279 33.7
FAN18G0662 Fragaria x ananassa HOM05D003795 ORTHO05D004308 9.2e-18 95.1 185 40.5
FAN18G1276 Fragaria x ananassa HOM05D003795 ORTHO05D004308 9.2e-18 95.1 185 40.5
Gohir.A11G170300 Gossypium hirsutum HOM05D003795 ORTHO05D004308 9.2e-18 95.1 339 32.2
Hma1.2p1_0034F.1_g021500 Hydrangea macrophylla HOM05D003795 ORTHO05D004308 9.2e-18 95.1 170 43.5
Cpa.g.sc108.20 Carica papaya HOM05D003795 ORTHO05D004308 1.2e-17 94.7 271 34.7
FvH4_5g39710 Fragaria vesca HOM05D003795 ORTHO05D004308 1.2e-17 94.7 185 40.5
Ciclev10011149m.g Citrus clementina HOM05D003795 ORTHO05D004308 1.6e-17 94.4 190 41.1
Gohir.D11G177300 Gossypium hirsutum HOM05D003795 ORTHO05D004308 2.7e-17 93.6 329 31.9
Glyma.14G207900 Glycine max HOM05D003795 ORTHO05D004308 3.5e-17 93.2 306 33.7
FAN08G2134 Fragaria x ananassa HOM05D003795 ORTHO05D004308 4.5e-17 92.8 185 40.0
Solyc02g036460.3 Solanum lycopersicum HOM05D003795 ORTHO05D004308 4.5e-17 92.8 223 38.6
Oeu030973.1 Olea europaea HOM05D003795 ORTHO05D004308 5.9e-17 92.4 64 82.8
HanXRQChr12g0365641 Helianthus annuus HOM05D003795 ORTHO05D004308 7.8e-17 92.0 279 36.9
LjContig00141g0025814 Lotus japonicus HOM05D003795 ORTHO05D004308 1.3e-16 91.3 333 32.4
Peaxi162Scf00784g00029 Petunia axillaris HOM05D003795 ORTHO05D004308 1.3e-16 91.3 269 39.0
ECA238G3337 Erigeron canadensis HOM05D003795 ORTHO05D004308 2.9e-16 90.1 174 41.4
FAN04G0804 Fragaria x ananassa HOM05D003795 ORTHO05D004308 3.9e-16 89.7 184 38.6
CAN.G304.8 Capsicum annuum HOM05D003795 ORTHO05D004308 1.1e-15 88.2 220 38.2
QL02p055515 Quercus lobata HOM05D003795 ORTHO05D004308 1.1e-15 88.2 259 32.8
Glyma.02G239000 Glycine max HOM05D003795 ORTHO05D004308 1.5e-15 87.8 302 33.8
Medtr5g076140 Medicago truncatula HOM05D003795 ORTHO05D004308 2.5e-15 87.0 247 34.8
Phvul.006G083400 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 2.5e-15 87.0 313 37.4
Manes.01G125700 Manihot esculenta HOM05D003795 ORTHO05D004308 3.3e-15 86.7 304 33.2
unitig_748.g8624 Utricularia gibba HOM05D003795 ORTHO05D004308 3.3e-15 86.7 241 38.6
unitig_0.g1678 Utricularia gibba HOM05D003795 ORTHO05D004308 4.3e-15 86.3 284 32.4
VMungo0540G0009 Vigna mungo HOM05D003795 ORTHO05D004308 1.6e-14 84.3 314 36.6
arahy.Tifrunner.gnm1.ann1.686QXT Arachis hypogaea HOM05D003795 ORTHO05D004308 2.1e-14 84.0 334 31.4
TWI74G0163 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 3.6e-14 83.2 313 32.3
arahy.Tifrunner.gnm1.ann1.SLU9BZ Arachis hypogaea HOM05D003795 ORTHO05D004308 4.7e-14 82.8 334 30.2
Haze_14040 Corylus avellana HOM05D003795 ORTHO05D004308 4.7e-14 82.8 263 39.2
TWI77G0024 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 4.7e-14 82.8 327 32.4
Lalb_Chr10g0103891 Lupinus albus HOM05D003795 ORTHO05D004308 6.1e-14 82.4 348 31.6
Psat2g048640 Pisum sativum HOM05D003795 ORTHO05D004308 8.0e-14 82.0 259 37.1
Hund22224 Selenicereus undatus HOM05D003795 ORTHO05D004308 8.0e-14 82.0 194 40.2
RcHm_v2.0_Chr7g0242011 Rosa chinensis HOM05D003795 ORTHO05D004308 1.0e-13 81.6 200 37.0
Sabra12G0109200 Salix brachista HOM05D003795 ORTHO05D004308 1.8e-13 80.9 217 35.9
unitig_748.g7017 Utricularia gibba HOM05D003795 ORTHO05D004308 4.0e-13 79.7 282 33.3
CARHR057540 Cardamine hirsuta HOM05D003795 ORTHO05D004308 1.2e-12 78.2 264 37.1
PGR042G3398 Punica granatum HOM05D003795 ORTHO05D004308 1.5e-12 77.8 216 35.2
AL2G22840 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 2.0e-12 77.4 176 38.6
Ca_05735_v3 Cicer arietinum L. HOM05D003795 ORTHO05D004308 2.0e-12 77.4 244 32.0
Lj6g0018352 Lotus japonicus HOM05D003795 ORTHO05D004308 2.6e-12 77.0 318 32.7
TPR.G15394 Trifolium pratense HOM05D003795 ORTHO05D004308 2.6e-12 77.0 317 30.3
THA.LOC104805668 Tarenaya hassleriana HOM05D003795 ORTHO05D004308 3.4e-12 76.6 326 33.1
ClCG01G008410 Citrullus lanatus HOM05D003795 ORTHO05D004308 5.8e-12 75.9 341 31.1
Glyma.18G048000 Glycine max HOM05D003795 ORTHO05D004308 5.8e-12 75.9 321 31.5
Atru.chr1.2190 Acer truncatum HOM05D003795 ORTHO05D004308 1.7e-11 74.3 173 39.9
Potri.012G145200 Populus trichocarpa HOM05D003795 ORTHO05D004308 1.7e-11 74.3 352 29.8
CsaV3_5G024360 Cucumis sativus L. HOM05D003795 ORTHO05D004308 2.9e-11 73.6 198 37.4
PSO063G2224 Papaver somniferum HOM05D003795 ORTHO05D004308 2.9e-11 73.6 127 45.7
Zm00001eb185660 Zea mays HOM05D003795 ORTHO05D004308 3.7e-11 73.2 153 39.9
AT1G65710 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 4.9e-11 72.8 176 36.9
Lsat_1_v5_gn_8_114961 Lactuca sativa HOM05D003795 ORTHO05D004308 8.3e-11 72.0 133 41.4
PSO782G2347 Papaver somniferum HOM05D003795 ORTHO05D004308 8.3e-11 72.0 128 45.3
Sabra15G0156700 Salix brachista HOM05D003795 ORTHO05D004308 8.3e-11 72.0 331 31.4
Ah.04g162800 Amaranthus hybridus HOM05D003795 ORTHO05D004308 1.1e-10 71.6 239 33.5
CiPaw.03G010000 Carya illinoinensis HOM05D003795 ORTHO05D004308 1.1e-10 71.6 311 32.2
Peaxi162Scf00116g00091 Petunia axillaris HOM05D004744 ORTHO05D005655 1.9e-10 70.9 229 38.4
Aa31LG9G17690 Aethionema arabicum HOM05D003795 ORTHO05D004308 2.4e-10 70.5 321 32.7
CDE07G0419 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 3.2e-10 70.1 205 37.6
MELO3C025107.2 Cucumis melo HOM05D003795 ORTHO05D004308 3.2e-10 70.1 341 29.6
Potri.015G147900 Populus trichocarpa HOM05D003795 ORTHO05D004308 3.2e-10 70.1 175 40.0
Zm00001eb427110 Zea mays HOM05D003795 ORTHO05D004308 3.2e-10 70.1 114 43.0
Manes.02G083300 Manihot esculenta HOM05D003795 ORTHO05D004308 4.1e-10 69.7 322 29.5
Glyma.11G202800 Glycine max HOM05D003795 ORTHO05D004308 5.4e-10 69.3 340 32.4
CANSAT78G1023 Cannabis sativa HOM05D003795 ORTHO05D004308 7.0e-10 68.9 317 34.4
MBI06_g17214_MAGBIO Magnolia biondii HOM05D003795 ORTHO05D004308 7.0e-10 68.9 223 33.6
Sp5g20650 Schrenkiella parvula HOM05D003795 ORTHO05D004308 7.0e-10 68.9 190 34.7
TAR629G1700 Trochodendron aralioides HOM05D003795 ORTHO05D004308 7.0e-10 68.9 172 39.0
Aa31LG2G10060 Aethionema arabicum HOM05D003795 ORTHO05D004308 1.2e-09 68.2 189 34.9
TPR.G37433 Trifolium pratense HOM05D003795 ORTHO05D004308 1.2e-09 68.2 317 29.7
Aqoxy3G04352 Aquilegia oxysepala HOM05D003795 ORTHO05D004308 1.6e-09 67.8 189 38.6
Thhalv10018468m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 1.6e-09 67.8 187 34.8
Nn4g24995 Nelumbo nucifera HOM05D003795 ORTHO05D004308 2.7e-09 67.0 68 55.9
Os04g0528600 Oryza sativa ssp. japonica HOM05D003795 ORTHO05D004308 3.5e-09 66.6 135 41.5
Sed0021341 Sechium edule HOM05D003795 ORTHO05D004308 3.5e-09 66.6 295 30.5
Zm00001eb075920 Zea mays HOM05D003795 ORTHO05D004308 4.6e-09 66.2 140 39.3
Ca_15099_v3 Cicer arietinum L. HOM05D003795 ORTHO05D004308 1.0e-08 65.1 298 34.2
CDE04G0398 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 1.7e-08 64.3 248 33.5
Medtr3g063210 Medicago truncatula HOM05D003795 ORTHO05D004308 1.7e-08 64.3 304 29.9
Ah.06g191370 Amaranthus hybridus HOM05D003795 ORTHO05D004308 2.3e-08 63.9 193 35.8
MD12G1074700 Malus domestica HOM05D003795 ORTHO05D004308 1.1e-07 61.6 160 36.2
BraA08t32141Z Brassica rapa HOM05D003795 ORTHO05D004308 1.5e-07 61.2 87 44.8
Psat5g144840 Pisum sativum HOM05D003795 ORTHO05D004308 1.9e-07 60.8 265 27.9
Carub.0002s1153 Capsella rubella HOM05D003795 ORTHO05D004308 4.3e-07 59.7 287 31.4
Sc20g0000860 Simmondsia chinensis HOM05D003795 ORTHO05D004308 5.6e-07 59.3 153 35.3
Nn4g24993 Nelumbo nucifera HOM05D003795 ORTHO05D004308 7.3e-07 58.9 66 57.6
HPP92_013140 Vanilla planifolia HOM05D003795 ORTHO05D004308 7.3e-07 58.9 277 28.9
Prupe.7G058700 Prunus persica HOM05D003795 ORTHO05D004308 1.2e-06 58.2 146 32.2
A08p00830 Brassica napus HOM05D003795 ORTHO05D004308 1.6e-06 57.8 201 32.8
Thhalv10018248m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 2.1e-06 57.4 197 33.0
Rhsim10G0186600 Rhododendron simsii HOM05D003795 ORTHO05D004308 6.2e-06 55.8 314 30.6


User provided reference genes

Program Settings