Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012502.2 Olea europaea HOM05D003795 ORTHO05D004308 3.6e-308 1060.8 575 100.0
Oeu060824.1 Olea europaea HOM05D003795 ORTHO05D004308 1.4e-166 590.5 673 59.4
Nitab4.5_0012787g0030 Nicotiana tabacum HOM05D003795 ORTHO05D004308 3.1e-126 456.4 684 48.4
Nitab4.5_0000483g0170 Nicotiana tabacum HOM05D003795 ORTHO05D004308 2.7e-122 443.4 698 47.4
PGSC0003DMG400019727 Solanum tuberosum HOM05D003795 ORTHO05D004308 3.6e-122 443.0 689 47.8
Lj2A509T28 Lonicera japonica HOM05D003795 ORTHO05D004308 3.1e-118 429.9 710 44.6
Dinv28269 Davidia involucrata HOM05D003795 ORTHO05D004308 6.6e-116 422.2 732 44.3
CAN.G809.93 Capsicum annuum HOM05D003795 ORTHO05D004308 9.2e-110 401.7 697 45.6
Oeu041416.1 Olea europaea HOM05D003795 ORTHO05D004308 4.6e-109 399.4 610 47.7
Peaxi162Scf00344g00199 Petunia axillaris HOM05D003795 ORTHO05D004308 4.6e-109 399.4 716 44.1
Sopen02g026080 Solanum pennellii HOM05D003795 ORTHO05D004308 4.6e-109 399.4 697 45.1
Solyc02g081440.4 Solanum lycopersicum HOM05D003795 ORTHO05D004308 8.0e-106 388.7 700 44.1
Cc07_g12620 Coffea canephora HOM05D003795 ORTHO05D004308 2.6e-104 383.6 719 44.2
CSS0049356 Camellia sinensis var. sinensis HOM05D003795 ORTHO05D004308 5.0e-100 369.4 734 42.2
SalBow5G4136 Salvia bowleyana HOM05D003795 ORTHO05D004308 1.9e-99 367.5 599 47.6
MSTRG.15619 Avicennia marina HOM05D003795 ORTHO05D004308 1.7e-95 354.4 706 45.3
MSTRG.3665 Avicennia marina HOM05D003795 ORTHO05D004308 1.9e-94 350.9 700 44.4
Oeu012503.1 Olea europaea HOM05D003795 ORTHO05D004308 4.1e-94 349.7 258 79.8
Potri.012G145200 Populus trichocarpa HOM05D003795 ORTHO05D004308 1.5e-91 341.3 703 40.5
DCAR_014135 Daucus carota HOM05D003795 ORTHO05D004308 5.6e-91 339.3 669 43.3
Sabra12G0109200 Salix brachista HOM05D003795 ORTHO05D004308 7.3e-91 339.0 643 42.3
Migut.K01203 Erythranthe guttata HOM05D003795 ORTHO05D004308 3.6e-90 336.7 655 46.1
Hma1.2p1_0085F.1_g043870 Hydrangea macrophylla HOM05D003795 ORTHO05D004308 3.1e-89 333.6 747 40.0
Duzib138G1939 Durio zibethinus HOM05D003795 ORTHO05D004308 1.2e-88 331.6 753 40.1
Manes.01G125700 Manihot esculenta HOM05D003795 ORTHO05D004308 2.1e-85 320.9 737 38.7
Manes.02G083300 Manihot esculenta HOM05D003795 ORTHO05D004308 7.8e-85 318.9 740 38.4
SGA_v2.0_scaffold199G41250 Striga asiatica HOM05D003795 ORTHO05D004308 1.3e-84 318.2 591 44.8
QL02p056567 Quercus lobata HOM05D003795 ORTHO05D004308 2.3e-84 317.4 726 39.7
FvH4_5g39710 Fragaria vesca HOM05D003795 ORTHO05D004308 5.1e-84 316.2 713 40.7
VMungo0647G0124 Vigna mungo HOM05D003795 ORTHO05D004308 1.9e-83 314.3 688 40.4
HanXRQChr14g0443551 Helianthus annuus HOM05D003795 ORTHO05D004308 2.5e-83 313.9 668 41.5
FAN18G0662 Fragaria x ananassa HOM05D003795 ORTHO05D004308 4.3e-83 313.2 711 41.1
FAN18G1276 Fragaria x ananassa HOM05D003795 ORTHO05D004308 4.3e-83 313.2 711 41.1
FAN08G2134 Fragaria x ananassa HOM05D003795 ORTHO05D004308 4.7e-82 309.7 711 40.1
Sabra15G0156700 Salix brachista HOM05D003795 ORTHO05D004308 4.7e-82 309.7 766 37.6
Thecc.04G056400 Theobroma cacao HOM05D003795 ORTHO05D004308 4.7e-82 309.7 764 38.1
Gohir.A11G170300 Gossypium hirsutum HOM05D003795 ORTHO05D004308 8.1e-82 308.9 642 42.7
Phvul.008G243000 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 1.4e-81 308.1 689 40.3
QL02p055515 Quercus lobata HOM05D003795 ORTHO05D004308 4.0e-81 306.6 706 39.4
GSVIVG01033197001 Vitis vinifera HOM05D003795 ORTHO05D004308 2.0e-80 304.3 658 42.2
Lsat_1_v5_gn_2_72041 Lactuca sativa HOM05D003795 ORTHO05D004308 9.9e-80 302.0 639 41.6
Gohir.D11G177300 Gossypium hirsutum HOM05D003795 ORTHO05D004308 2.3e-76 290.8 672 39.7
Potri.015G147900 Populus trichocarpa HOM05D003795 ORTHO05D004308 5.1e-76 289.7 756 37.6
Cpa.g.sc108.20 Carica papaya HOM05D003795 ORTHO05D004308 7.3e-75 285.8 711 38.5
Gorai.007G189400 Gossypium raimondii HOM05D003795 ORTHO05D004308 7.3e-75 285.8 673 39.8
FAN04G0804 Fragaria x ananassa HOM05D003795 ORTHO05D004308 1.3e-74 285.0 634 39.4
LjContig00141g0025814 Lotus japonicus HOM05D003795 ORTHO05D004308 8.1e-74 282.3 744 36.8
vmacro20445 Vaccinium macrocarpon HOM05D003795 ORTHO05D004308 6.9e-73 279.3 696 39.5
TWI74G0163 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 2.6e-72 277.3 748 37.0
Haze_14040 Corylus avellana HOM05D003795 ORTHO05D004308 3.4e-72 276.9 710 38.9
COL.COLO4_13440 Corchorus olitorius HOM05D003795 ORTHO05D004308 2.2e-71 274.2 552 42.0
ECA238G3337 Erigeron canadensis HOM05D003795 ORTHO05D004308 1.1e-70 271.9 648 38.7
Phvul.006G083400 Phaseolus vulgaris HOM05D003795 ORTHO05D004308 5.4e-70 269.6 741 38.1
Glyma.14G207900 Glycine max HOM05D003795 ORTHO05D004308 7.1e-70 269.2 743 37.8
RcHm_v2.0_Chr7g0242011 Rosa chinensis HOM05D003795 ORTHO05D004308 9.3e-70 268.9 720 37.6
VMungo0540G0009 Vigna mungo HOM05D003795 ORTHO05D004308 2.7e-69 267.3 719 38.4
HanXRQChr12g0365641 Helianthus annuus HOM05D003795 ORTHO05D004308 3.0e-68 263.8 612 40.2
MELO3C025107.2 Cucumis melo HOM05D003795 ORTHO05D004308 3.9e-68 263.5 768 35.5
CiPaw.03G010000 Carya illinoinensis HOM05D003795 ORTHO05D004308 5.1e-68 263.1 737 36.8
Nitab4.5_0008083g0010 Nicotiana tabacum HOM05D003795 ORTHO05D004308 1.1e-67 261.9 685 38.1
Peaxi162Scf00784g00029 Petunia axillaris HOM05D003795 ORTHO05D004308 7.4e-67 259.2 624 39.1
TWI77G0024 Tripterygium wilfordii HOM05D003795 ORTHO05D004308 9.6e-67 258.8 721 37.2
Nn4g24993 Nelumbo nucifera HOM05D003795 ORTHO05D004308 2.8e-66 257.3 609 38.1
Sed0021341 Sechium edule HOM05D003795 ORTHO05D004308 8.1e-66 255.8 726 35.7
Nitab4.5_0002297g0070 Nicotiana tabacum HOM05D003795 ORTHO05D004308 2.0e-64 251.1 680 36.8
Glyma.02G239000 Glycine max HOM05D003795 ORTHO05D004308 3.4e-64 250.4 712 36.4
Psat2g048640 Pisum sativum HOM05D003795 ORTHO05D004308 3.4e-64 250.4 621 38.6
THA.LOC104805668 Tarenaya hassleriana HOM05D003795 ORTHO05D004308 7.6e-64 249.2 725 37.1
arahy.Tifrunner.gnm1.ann1.SLU9BZ Arachis hypogaea HOM05D003795 ORTHO05D004308 2.9e-63 247.3 741 34.5
Nn4g24995 Nelumbo nucifera HOM05D003795 ORTHO05D004308 3.8e-63 246.9 626 38.2
ClCG01G008410 Citrullus lanatus HOM05D003795 ORTHO05D004308 4.9e-63 246.5 705 36.5
arahy.Tifrunner.gnm1.ann1.686QXT Arachis hypogaea HOM05D003795 ORTHO05D004308 8.4e-63 245.7 748 34.6
CsaV3_5G024360 Cucumis sativus L. HOM05D003795 ORTHO05D004308 5.5e-62 243.0 771 34.5
Glyma.18G048000 Glycine max HOM05D003795 ORTHO05D004308 7.1e-62 242.7 711 36.6
Glyma.11G202800 Glycine max HOM05D003795 ORTHO05D004308 1.2e-61 241.9 755 34.7
Rhsim10G0186600 Rhododendron simsii HOM05D003795 ORTHO05D004308 3.5e-61 240.4 693 39.0
Lj6g0018352 Lotus japonicus HOM05D003795 ORTHO05D004308 3.0e-60 237.3 737 34.3
unitig_0.g1678 Utricularia gibba HOM05D003795 ORTHO05D004308 3.9e-60 236.9 612 36.3
Lalb_Chr18g0053951 Lupinus albus HOM05D003795 ORTHO05D004308 1.6e-58 231.5 628 36.3
PSO063G2224 Papaver somniferum HOM05D003795 ORTHO05D004308 3.7e-58 230.3 628 37.6
Ciclev10011149m.g Citrus clementina HOM05D003795 ORTHO05D004308 8.1e-58 229.2 756 33.3
CAN.G304.8 Capsicum annuum HOM05D003795 ORTHO05D004308 1.8e-57 228.0 624 36.7
Ca_15099_v3 Cicer arietinum L. HOM05D003795 ORTHO05D004308 1.8e-57 228.0 684 33.8
Ca_05735_v3 Cicer arietinum L. HOM05D003795 ORTHO05D004308 2.4e-57 227.6 649 36.4
Actinidia22883 Actinidia chinensis HOM05D003795 ORTHO05D004308 4.0e-57 226.9 602 37.5
PGSC0003DMG400021472 Solanum tuberosum HOM05D003795 ORTHO05D004308 6.9e-57 226.1 657 35.9
PSO782G2347 Papaver somniferum HOM05D003795 ORTHO05D004308 9.0e-57 225.7 594 38.7
unitig_748.g8624 Utricularia gibba HOM05D003795 ORTHO05D004308 1.5e-56 224.9 560 40.5
Hma1.2p1_0034F.1_g021500 Hydrangea macrophylla HOM05D003795 ORTHO05D004308 4.9e-55 219.9 743 33.8
Medtr5g076140 Medicago truncatula HOM05D003795 ORTHO05D004308 5.5e-54 216.5 610 36.1
unitig_748.g7017 Utricularia gibba HOM05D003795 ORTHO05D004308 5.5e-54 216.5 609 36.6
Hund22224 Selenicereus undatus HOM05D003795 ORTHO05D004308 1.2e-53 215.3 722 35.2
Aa31LG2G10060 Aethionema arabicum HOM05D003795 ORTHO05D004308 2.7e-53 214.2 729 34.2
MBI06_g17214_MAGBIO Magnolia biondii HOM05D003795 ORTHO05D004308 4.6e-53 213.4 629 35.5
Sopen02g011820 Solanum pennellii HOM05D003795 ORTHO05D004308 1.0e-52 212.2 671 34.6
PGR042G3398 Punica granatum HOM05D003795 ORTHO05D004308 1.5e-51 208.4 736 34.4
Ah.04g162800 Amaranthus hybridus HOM05D003795 ORTHO05D004308 2.5e-51 207.6 644 35.7
Aqoxy3G04352 Aquilegia oxysepala HOM05D003795 ORTHO05D004308 5.7e-51 206.5 731 32.4
AT5G37010 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 3.7e-50 203.8 690 35.9
Solyc02g036460.3 Solanum lycopersicum HOM05D003795 ORTHO05D004308 4.8e-50 203.4 676 34.8
TPR.G37433 Trifolium pratense HOM05D003795 ORTHO05D004308 6.3e-50 203.0 658 33.1
CANSAT78G1023 Cannabis sativa HOM05D003795 ORTHO05D004308 1.1e-49 202.2 693 35.6
Medtr3g063210 Medicago truncatula HOM05D003795 ORTHO05D004308 2.4e-49 201.1 696 32.3
TPR.G15394 Trifolium pratense HOM05D003795 ORTHO05D004308 2.6e-48 197.6 686 32.8
Psat5g144840 Pisum sativum HOM05D003795 ORTHO05D004308 4.5e-48 196.8 603 33.7
CARHR216000 Cardamine hirsuta HOM05D003795 ORTHO05D004308 1.3e-47 195.3 682 33.6
Eucgr.J01649 Eucalyptus grandis HOM05D003795 ORTHO05D004308 7.2e-46 189.5 482 37.6
Os04g0528600 Oryza sativa ssp. japonica HOM05D003795 ORTHO05D004308 1.2e-45 188.7 553 35.3
PGSC0003DMG402019715 Solanum tuberosum HOM05D003795 ORTHO05D004308 2.7e-45 187.6 256 48.0
Zm00001eb427110 Zea mays HOM05D003795 ORTHO05D004308 6.1e-45 186.4 527 35.5
Sp7g05490 Schrenkiella parvula HOM05D003795 ORTHO05D004308 7.9e-45 186.0 706 33.0
AL7G45860 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 1.8e-44 184.9 687 34.4
BcaB06g27061 Brassica carinata HOM05D003795 ORTHO05D004308 3.0e-44 184.1 647 33.7
Carub.0002s1153 Capsella rubella HOM05D003795 ORTHO05D004308 3.9e-44 183.7 586 35.8
Sabra16G0322500 Salix brachista HOM05D003795 ORTHO05D004308 5.1e-44 183.3 337 44.2
HPP92_013140 Vanilla planifolia HOM05D003795 ORTHO05D004308 1.9e-43 181.4 568 35.2
Thhalv10018248m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 2.5e-43 181.0 711 33.9
Atru.chr1.2190 Acer truncatum HOM05D003795 ORTHO05D004308 4.3e-43 180.3 606 34.7
Actinidia32996 Actinidia chinensis HOM05D003795 ORTHO05D004308 5.7e-43 179.9 403 41.7
Dinv19094 Davidia involucrata HOM05D003795 ORTHO05D004308 7.4e-43 179.5 259 49.8
AT1G65710 Arabidopsis thaliana HOM05D003795 ORTHO05D004308 9.7e-43 179.1 542 35.2
AL2G22840 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 1.3e-42 178.7 550 35.6
Aa31LG9G17690 Aethionema arabicum HOM05D003795 ORTHO05D004308 3.7e-42 177.2 717 33.6
CARHR057540 Cardamine hirsuta HOM05D003795 ORTHO05D004308 3.7e-42 177.2 543 36.6
MD12G1074700 Malus domestica HOM05D003795 ORTHO05D004308 3.7e-42 177.2 652 33.3
Thhalv10018468m.g Eutrema salsugineum HOM05D003795 ORTHO05D004308 6.3e-42 176.4 547 33.6
Ah.06g191370 Amaranthus hybridus HOM05D003795 ORTHO05D004308 1.8e-41 174.9 700 32.1
Carub.0007s3228 Capsella rubella HOM05D003795 ORTHO05D004308 3.1e-41 174.1 622 34.9
BcaC02g09547 Brassica carinata HOM05D003795 ORTHO05D004308 1.5e-40 171.8 667 33.9
C04p43990 Brassica napus HOM05D003795 ORTHO05D004308 1.7e-39 168.3 668 33.4
BolC4t25981H Brassica oleracea HOM05D003795 ORTHO05D004308 2.9e-39 167.5 682 33.4
Sp5g20650 Schrenkiella parvula HOM05D003795 ORTHO05D004308 5.0e-39 166.8 531 35.6
Zm00001eb075920 Zea mays HOM05D003795 ORTHO05D004308 3.0e-36 157.5 544 33.8
Zm00001eb185660 Zea mays HOM05D003795 ORTHO05D004308 3.0e-36 157.5 540 33.0
TAR629G1700 Trochodendron aralioides HOM05D003795 ORTHO05D004308 8.8e-36 156.0 437 37.8
Sc20g0000860 Simmondsia chinensis HOM05D003795 ORTHO05D004308 2.6e-35 154.5 753 31.2
A04p10490 Brassica napus HOM05D003795 ORTHO05D004308 6.9e-33 146.4 390 37.4
Aqoxy2G03712 Aquilegia oxysepala HOM05D003795 ORTHO05D004308 2.2e-31 141.4 198 48.0
EL10Ac4g08850 Beta vulgaris HOM05D003795 ORTHO05D004308 8.5e-31 139.4 760 30.9
CDE04G0398 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 6.7e-28 129.8 758 28.9
A08p00830 Brassica napus HOM05D003795 ORTHO05D004308 2.6e-27 127.9 521 31.7
VMungo1215G2457 Vigna mungo HOM05D003795 ORTHO05D004308 4.4e-27 127.1 300 37.7
BolC3t21550H Brassica oleracea HOM05D003795 ORTHO05D004308 2.0e-24 118.2 411 33.3
AUR62017269 Chenopodium quinoa HOM05D003795 ORTHO05D004308 5.9e-24 116.7 430 31.2
CDE07G0419 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 1.0e-23 115.9 518 30.7
Oeu030973.1 Olea europaea HOM05D003795 ORTHO05D004308 1.7e-23 115.2 103 75.7
CDE08G0767 Ceratophyllum demersum HOM05D003795 ORTHO05D004308 2.2e-23 114.8 729 27.7
Peaxi162Scf00116g00915 Petunia axillaris HOM05D004744 ORTHO05D005655 3.8e-23 114.0 193 42.0
BcaC01g01477 Brassica carinata HOM05D003795 ORTHO05D004308 1.2e-21 109.0 518 30.1
C03p92420 Brassica napus HOM05D003795 ORTHO05D004308 1.2e-21 109.0 518 30.1
Lalb_Chr10g0103891 Lupinus albus HOM05D003795 ORTHO05D004308 2.1e-21 108.2 417 34.3
Lsat_1_v5_gn_8_114961 Lactuca sativa HOM05D003795 ORTHO05D004308 2.3e-20 104.8 465 32.0
BraA08t32141Z Brassica rapa HOM05D003795 ORTHO05D004308 2.6e-19 101.3 459 32.5
BcaB04g16989 Brassica carinata HOM05D003795 ORTHO05D004308 9.7e-19 99.4 544 29.2
AUR62010626 Chenopodium quinoa HOM05D003795 ORTHO05D004308 9.1e-17 92.8 119 48.7
VMungo1383G0923 Vigna mungo HOM05D003795 ORTHO05D004308 2.7e-16 91.3 145 43.4
Os02g0638200 Oryza sativa ssp. japonica HOM05D003795 ORTHO05D004308 7.7e-16 89.7 166 41.0
ATR0124G054 Amborella trichopoda HOM05D003795 ORTHO05D004308 5.5e-14 83.6 496 28.6
Sabra16G0322400 Salix brachista HOM05D003795 ORTHO05D004308 2.1e-13 81.6 122 43.4
Prupe.7G058700 Prunus persica HOM05D003795 ORTHO05D004308 5.2e-12 77.0 358 30.4
AL6G17260 Arabidopsis lyrata HOM05D003795 ORTHO05D004308 8.8e-12 76.3 212 34.0
Prupe.7G058800 Prunus persica HOM05D003795 ORTHO05D004308 8.8e-12 76.3 136 41.9
Peaxi162Scf00116g00091 Petunia axillaris HOM05D004744 ORTHO05D005655 7.5e-11 73.2 130 42.3
Lalb_Chr10g0103871 Lupinus albus HOM05D003795 ORTHO05D004308 1.4e-09 68.9 106 45.3
AUR62010625 Chenopodium quinoa HOM05D003795 ORTHO05D004308 3.5e-08 64.3 140 40.7
TAR629G2443 Trochodendron aralioides HOM05D003795 ORTHO05D004308 3.5e-08 64.3 99 43.4
BcaB05g24123 Brassica carinata HOM05D003795 ORTHO05D004308 1.7e-07 62.0 311 29.6
Aa31LG1G18490 Aethionema arabicum HOM05D003795 ORTHO05D004308 3.8e-07 60.8 59 57.6
ECA232G0457 Erigeron canadensis HOM05D003795 ORTHO05D004308 3.2e-06 57.8 407 29.2


User provided reference genes

Program Settings