Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012473.1 Olea europaea HOM05D004210 ORTHO05D005017 8.2e-285 983.0 490 100.0
Oeu027040.1 Olea europaea HOM05D004210 ORTHO05D005017 8.0e-256 886.7 463 93.5
Dinv04121 Davidia involucrata HOM05D004210 ORTHO05D005017 1.0e-242 843.2 487 84.8
Lj8A287G21 Lonicera japonica HOM05D004210 ORTHO05D005017 5.2e-231 804.3 491 80.9
Actinidia18370 Actinidia chinensis HOM05D004210 ORTHO05D005017 2.6e-230 802.0 486 80.7
Cc08_g06030 Coffea canephora HOM05D004210 ORTHO05D005017 1.3e-229 799.7 487 80.1
MSTRG.20468 Avicennia marina HOM05D004210 ORTHO05D005017 1.2e-227 793.1 487 79.9
CiPaw.14G037100 Carya illinoinensis HOM05D004210 ORTHO05D005017 2.3e-226 788.9 487 79.9
Nitab4.5_0001611g0030 Nicotiana tabacum HOM05D004210 ORTHO05D005017 8.6e-226 786.9 492 79.7
Nitab4.5_0004014g0070 Nicotiana tabacum HOM05D004210 ORTHO05D005017 8.6e-226 786.9 493 79.3
Rhsim04G0193600 Rhododendron simsii HOM05D004210 ORTHO05D005017 8.6e-226 786.9 488 78.7
vmacro20845 Vaccinium macrocarpon HOM05D004210 ORTHO05D005017 1.9e-225 785.8 488 79.3
Peaxi162Scf00647g00139 Petunia axillaris HOM05D004210 ORTHO05D005017 2.1e-224 782.3 487 79.1
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 1.7e-221 772.7 487 78.6
Nn5g30473 Nelumbo nucifera HOM05D004210 ORTHO05D005017 1.1e-220 770.0 487 76.8
QL04p049870 Quercus lobata HOM05D004210 ORTHO05D005017 1.4e-220 769.6 456 82.5
CANSAT56G1750 Cannabis sativa HOM05D004210 ORTHO05D005017 4.2e-220 768.1 487 78.0
SalBow4G0418 Salvia bowleyana HOM05D004210 ORTHO05D005017 9.2e-220 766.9 487 78.6
CSS0018495 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 6.0e-219 764.2 488 76.8
Cpa.g.sc138.49 Carica papaya HOM05D004210 ORTHO05D005017 6.0e-219 764.2 487 77.8
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 6.0e-219 764.2 474 80.6
Potri.019G000900 Populus trichocarpa HOM05D004210 ORTHO05D005017 1.3e-218 763.1 486 77.8
Migut.B01123 Erythranthe guttata HOM05D004210 ORTHO05D005017 5.1e-218 761.1 465 80.6
Potri.001G305500 Populus trichocarpa HOM05D004210 ORTHO05D005017 8.7e-218 760.4 487 78.2
TAR376G0596 Trochodendron aralioides HOM05D004210 ORTHO05D005017 2.5e-217 758.8 488 76.4
Prupe.5G058900 Prunus persica HOM05D004210 ORTHO05D005017 4.3e-217 758.1 488 78.3
Atru.chr10.436 Acer truncatum HOM05D004210 ORTHO05D005017 1.6e-216 756.1 487 77.8
Manes.13G078700 Manihot esculenta HOM05D004210 ORTHO05D005017 1.6e-216 756.1 453 81.9
MD02G1259400 Malus domestica HOM05D004210 ORTHO05D005017 2.1e-216 755.7 472 78.2
RcHm_v2.0_Chr6g0268021 Rosa chinensis HOM05D004210 ORTHO05D005017 1.1e-215 753.4 487 77.0
Thecc.10G122400 Theobroma cacao HOM05D004210 ORTHO05D005017 4.0e-215 751.5 487 76.8
FvH4_2g10510 Fragaria vesca HOM05D004210 ORTHO05D005017 5.3e-215 751.1 487 76.6
MD07G1061200 Malus domestica HOM05D004210 ORTHO05D005017 1.2e-214 750.0 472 78.0
FAN24G2713 Fragaria x ananassa HOM05D004210 ORTHO05D005017 4.4e-214 748.0 487 76.4
Duzib114G0085 Durio zibethinus HOM05D004210 ORTHO05D005017 7.6e-214 747.3 487 76.4
FAN15G0031 Fragaria x ananassa HOM05D004210 ORTHO05D005017 9.9e-214 746.9 487 76.2
Sabra19G0005800 Salix brachista HOM05D004210 ORTHO05D005017 2.2e-213 745.7 499 74.3
Sabra19G0014200 Salix brachista HOM05D004210 ORTHO05D005017 2.9e-213 745.3 499 74.3
TAR625G1450 Trochodendron aralioides HOM05D004210 ORTHO05D005017 2.9e-213 745.3 490 75.1
ClCG05G022120 Citrullus lanatus HOM05D004210 ORTHO05D005017 3.8e-213 745.0 487 75.4
MELO3C012312.2 Cucumis melo HOM05D004210 ORTHO05D005017 6.4e-213 744.2 487 75.4
FAN20G0431 Fragaria x ananassa HOM05D004210 ORTHO05D005017 6.4e-213 744.2 487 76.0
FAN27G0821 Fragaria x ananassa HOM05D004210 ORTHO05D005017 8.4e-213 743.8 492 75.8
PGR142G1915 Punica granatum HOM05D004210 ORTHO05D005017 1.4e-212 743.0 487 74.3
Sabra16G0191800 Salix brachista HOM05D004210 ORTHO05D005017 1.9e-212 742.7 487 76.0
COL.COLO4_16323 Corchorus olitorius HOM05D004210 ORTHO05D005017 2.4e-212 742.3 487 76.0
CsaV3_5G035020 Cucumis sativus L. HOM05D004210 ORTHO05D005017 7.1e-212 740.7 487 75.4
GSVIVG01018295001 Vitis vinifera HOM05D004210 ORTHO05D005017 1.6e-211 739.6 487 76.6
PGSC0003DMG400027522 Solanum tuberosum HOM05D004210 ORTHO05D005017 2.1e-211 739.2 487 74.7
Sopen01g040660 Solanum pennellii HOM05D004210 ORTHO05D005017 6.0e-211 737.6 487 74.9
Ciclev10014800m.g Citrus clementina HOM05D004210 ORTHO05D005017 5.1e-210 734.6 487 75.2
Sed0024731 Sechium edule HOM05D004210 ORTHO05D005017 1.9e-209 732.6 487 73.7
Sabra19G0013500 Salix brachista HOM05D004210 ORTHO05D005017 9.6e-209 730.3 476 75.8
Solyc01g096950.4 Solanum lycopersicum HOM05D004210 ORTHO05D005017 2.8e-208 728.8 487 74.1
DCAR_002139 Daucus carota HOM05D004210 ORTHO05D005017 3.6e-208 728.4 487 73.3
Gorai.013G003300 Gossypium raimondii HOM05D004210 ORTHO05D005017 3.6e-208 728.4 490 74.7
Gohir.D13G003400 Gossypium hirsutum HOM05D004210 ORTHO05D005017 4.8e-208 728.0 490 74.7
Glyma.13G124200 Glycine max HOM05D004210 ORTHO05D005017 1.1e-207 726.9 489 72.8
Glyma.06G315900 Glycine max HOM05D004210 ORTHO05D005017 1.8e-207 726.1 489 73.0
Sabra19G0006000 Salix brachista HOM05D004210 ORTHO05D005017 2.4e-207 725.7 476 75.6
Gohir.A13G003500 Gossypium hirsutum HOM05D004210 ORTHO05D005017 4.0e-207 724.9 490 74.3
TAR381G0930 Trochodendron aralioides HOM05D004210 ORTHO05D005017 1.5e-206 723.0 441 78.0
Sed0005167 Sechium edule HOM05D004210 ORTHO05D005017 4.5e-206 721.5 487 74.1
ECA248G0690 Erigeron canadensis HOM05D004210 ORTHO05D005017 5.8e-206 721.1 489 71.6
PSO541G0139 Papaver somniferum HOM05D004210 ORTHO05D005017 8.4e-205 717.2 489 72.4
Aqoxy1G00569 Aquilegia oxysepala HOM05D004210 ORTHO05D005017 1.1e-204 716.8 488 71.5
Glyma.05G087400 Glycine max HOM05D004210 ORTHO05D005017 1.2e-203 713.4 460 75.4
Lj3g0025560 Lotus japonicus HOM05D004210 ORTHO05D005017 1.2e-203 713.4 489 72.4
EL10Ac7g18124 Beta vulgaris HOM05D004210 ORTHO05D005017 1.6e-203 713.0 487 71.7
Phvul.008G161500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 2.1e-203 712.6 489 71.8
Duzib106G1791 Durio zibethinus HOM05D004210 ORTHO05D005017 4.6e-203 711.4 475 74.5
Sc18g0006930 Simmondsia chinensis HOM05D004210 ORTHO05D005017 2.3e-202 709.1 488 71.1
arahy.Tifrunner.gnm1.ann1.374KBL Arachis hypogaea HOM05D004210 ORTHO05D005017 3.9e-202 708.4 487 72.3
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 8.7e-202 707.2 487 72.3
Glyma.04G129500 Glycine max HOM05D004210 ORTHO05D005017 5.6e-201 704.5 462 74.9
Glyma.08G229800 Glycine max HOM05D004210 ORTHO05D005017 1.6e-200 703.0 488 72.3
TPR.G14605 Trifolium pratense HOM05D004210 ORTHO05D005017 2.1e-200 702.6 487 72.1
HPP92_001742 Vanilla planifolia HOM05D004210 ORTHO05D005017 8.1e-200 700.7 484 70.5
arahy.Tifrunner.gnm1.ann1.A6SQAT Arachis hypogaea HOM05D004210 ORTHO05D005017 1.8e-199 699.5 487 71.5
PSO478G0462 Papaver somniferum HOM05D004210 ORTHO05D005017 1.8e-199 699.5 489 71.2
Phvul.003G276000 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 9.0e-199 697.2 488 71.3
VMungo0251G3202 Vigna mungo HOM05D004210 ORTHO05D005017 1.3e-197 693.3 488 70.7
Lsat_1_v5_gn_4_138820 Lactuca sativa HOM05D004210 ORTHO05D005017 1.7e-197 693.0 489 72.0
THA.LOC104804661 Tarenaya hassleriana HOM05D004210 ORTHO05D005017 3.8e-197 691.8 487 70.4
Hund06390 Selenicereus undatus HOM05D004210 ORTHO05D005017 6.5e-197 691.0 487 69.8
TPR.G24022 Trifolium pratense HOM05D004210 ORTHO05D005017 1.1e-196 690.3 487 70.2
Medtr8g041740 Medicago truncatula HOM05D004210 ORTHO05D005017 4.2e-196 688.3 486 70.2
Hund00055 Selenicereus undatus HOM05D004210 ORTHO05D005017 4.2e-196 688.3 567 63.3
CDE04G1921 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 1.2e-195 686.8 488 69.7
Aa31LG8G7780 Aethionema arabicum HOM05D004210 ORTHO05D005017 2.7e-195 685.6 487 70.2
Psat4g180480 Pisum sativum HOM05D004210 ORTHO05D005017 1.3e-194 683.3 487 70.2
CDE07G1685 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 1.8e-194 682.9 488 69.7
Lalb_Chr01g0007661 Lupinus albus HOM05D004210 ORTHO05D005017 6.7e-194 681.0 488 69.7
Psat4g200760 Pisum sativum HOM05D004210 ORTHO05D005017 2.5e-193 679.1 488 70.5
Ca_05576_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 7.4e-193 677.6 528 65.7
Medtr8g045440 Medicago truncatula HOM05D004210 ORTHO05D005017 7.4e-193 677.6 487 69.2
VMungo0647G0038 Vigna mungo HOM05D004210 ORTHO05D005017 1.3e-192 676.8 479 69.7
Thhalv10020461m.g Eutrema salsugineum HOM05D004210 ORTHO05D005017 1.4e-191 673.3 487 69.6
Manes.13G077346 Manihot esculenta HOM05D004210 ORTHO05D005017 1.4e-191 673.3 381 84.0
Carub.0003s2096 Capsella rubella HOM05D004210 ORTHO05D005017 4.5e-190 668.3 487 69.2
Medtr8g045463 Medicago truncatula HOM05D004210 ORTHO05D005017 4.5e-190 668.3 489 67.9
Medtr8g045470 Medicago truncatula HOM05D004210 ORTHO05D005017 4.5e-190 668.3 489 67.9
AUR62001320 Chenopodium quinoa HOM05D004210 ORTHO05D005017 5.8e-190 667.9 489 66.7
Sp3g19020 Schrenkiella parvula HOM05D004210 ORTHO05D005017 1.7e-189 666.4 487 68.8
AT3G21060 Arabidopsis thaliana HOM05D004210 ORTHO05D005017 2.2e-189 666.0 487 69.8
AUR62025703 Chenopodium quinoa HOM05D004210 ORTHO05D005017 2.9e-189 665.6 489 67.3
BraA01t03490Z Brassica rapa HOM05D004210 ORTHO05D005017 9.3e-188 660.6 487 68.4
Lalb_Chr18g0049111 Lupinus albus HOM05D004210 ORTHO05D005017 2.1e-187 659.4 489 65.6
C01p43210 Brassica napus HOM05D004210 ORTHO05D005017 2.7e-187 659.1 487 68.8
BcaB04g20615 Brassica carinata HOM05D004210 ORTHO05D005017 7.9e-187 657.5 463 70.8
BolC1t04267H Brassica oleracea HOM05D004210 ORTHO05D005017 1.3e-186 656.8 487 68.4
BcaC09g49045 Brassica carinata HOM05D004210 ORTHO05D005017 2.3e-186 656.0 487 68.4
HanXRQChr09g0259631 Helianthus annuus HOM05D004210 ORTHO05D005017 3.0e-186 655.6 489 69.7
SGA_v2.0_scaffold196G40978 Striga asiatica HOM05D004210 ORTHO05D005017 6.7e-186 654.4 500 67.6
ATR0661G188 Amborella trichopoda HOM05D004210 ORTHO05D005017 3.3e-185 652.1 488 67.2
CARHR096890 Cardamine hirsuta HOM05D004210 ORTHO05D005017 2.2e-184 649.4 458 70.7
A01p33790 Brassica napus HOM05D004210 ORTHO05D005017 3.8e-181 638.6 475 68.2
AL3G35010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 1.5e-174 616.7 487 66.3
AL249U10010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 5.5e-172 608.2 377 76.1
Os03g0207900 Oryza sativa ssp. japonica HOM05D004210 ORTHO05D005017 2.1e-171 606.3 492 62.0
ECA238G3001 Erigeron canadensis HOM05D004210 ORTHO05D005017 6.1e-171 604.7 494 62.6
Zm00001eb007220 Zea mays HOM05D004210 ORTHO05D005017 8.8e-170 600.9 488 61.1
Ca_13103_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.7e-165 586.6 501 61.9
HanXRQChr14g0446551 Helianthus annuus HOM05D004210 ORTHO05D005017 1.6e-163 580.1 477 62.5
Psat2g059840 Pisum sativum HOM05D004210 ORTHO05D005017 8.5e-157 557.8 497 58.4
TWI75G1118 Tripterygium wilfordii HOM05D004210 ORTHO05D005017 2.8e-152 542.7 490 58.2
Eucgr.G02654 Eucalyptus grandis HOM05D004210 ORTHO05D005017 5.4e-151 538.5 387 70.0
Dinv30359 Davidia involucrata HOM05D004210 ORTHO05D005017 1.3e-149 533.9 326 81.9
Ca_24147_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 4.1e-143 512.3 365 70.7
Pp3c12_14420 Physcomitrium patens HOM05D004210 ORTHO05D005017 6.6e-141 505.0 486 53.7
Lalb_Chr03g0032281 Lupinus albus HOM05D004210 ORTHO05D005017 1.6e-139 500.4 417 63.1
Ca_24139_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 2.3e-138 496.5 489 56.4
Mapoly0028s0049 Marchantia polymorpha HOM05D004210 ORTHO05D005017 5.4e-135 485.3 498 52.6
Phvul.011G184500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 1.3e-133 480.7 467 56.3
unitig_26.g9497 Utricularia gibba HOM05D004210 ORTHO05D005017 1.7e-133 480.3 381 65.1
AagrBONN_evm.TU.Sc2ySwM_344.4521 Anthoceros agrestis HOM05D004210 ORTHO05D005017 4.7e-123 445.7 501 50.1
CSS0025743 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 1.4e-122 444.1 389 63.5
AagrBONN_evm.TU.Sc2ySwM_368.940 Anthoceros agrestis HOM05D004210 ORTHO05D005017 5.2e-122 442.2 499 49.1
SMO145G0186 Selaginella moellendorffii HOM05D004210 ORTHO05D005017 6.8e-114 415.2 424 50.9
CBR_g10843 Chara braunii HOM05D004210 ORTHO05D005017 1.3e-96 357.8 564 41.0
SEGI_20000 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 7.4e-92 342.0 280 57.9
CBR_g18561 Chara braunii HOM05D004210 ORTHO05D005017 3.6e-91 339.7 509 41.5
Dinv18710 Davidia involucrata HOM05D004210 ORTHO05D005017 2.9e-88 330.1 275 65.5
Dinv18720 Davidia involucrata HOM05D004210 ORTHO05D005017 9.7e-68 261.9 165 83.0
MBI16_g14436_MAGBIO Magnolia biondii HOM05D004210 ORTHO05D005017 2.7e-62 243.8 244 56.1
SEGI_15684 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 7.9e-54 215.7 215 56.3
Cre03.g195750 Chlamydomonas reinhardtii HOM05D004210 ORTHO05D005017 2.4e-50 204.1 432 32.2
Atru.chr12.1163 Acer truncatum HOM05D004210 ORTHO05D005017 3.0e-45 187.2 91 95.6
Rhsim01G0121500 Rhododendron simsii HOM05D004210 ORTHO05D005017 3.0e-45 187.2 111 85.6
Dinv18721 Davidia involucrata HOM05D004210 ORTHO05D005017 8.8e-45 185.7 154 61.7
Pp3c4_7580 Physcomitrium patens HOM05D004210 ORTHO05D005017 8.8e-45 185.7 378 34.9
PRCOL_00000885 Prasinoderma coloniale HOM05D004210 ORTHO05D005017 1.5e-44 184.9 473 31.9
MCO03G571 Micromonas commoda HOM05D004210 ORTHO05D005017 1.1e-42 178.7 390 31.5
VMungo1127G1364 Vigna mungo HOM05D004210 ORTHO05D005017 5.2e-37 159.8 169 47.9
Cfa023087 Carpinus fangiana HOM05D004210 ORTHO05D005017 1.3e-35 155.2 407 29.7
Glyma.12G171232 Glycine max HOM05D004210 ORTHO05D013328 2.0e-28 131.3 72 81.9
Aa31LG8G7760 Aethionema arabicum HOM05D004210 ORTHO05D005017 2.3e-24 117.9 93 64.5
Manes.13G077544 Manihot esculenta HOM05D004210 ORTHO05D005017 4.3e-23 113.6 122 60.7
Medtr5g069620 Medicago truncatula HOM05D004210 ORTHO05D005017 6.1e-22 109.8 86 59.3
Nn1g02745 Nelumbo nucifera HOM05D000508 ORTHO05D000371 8.9e-21 105.9 163 40.5
Atru.chr12.1162 Acer truncatum HOM05D004210 ORTHO05D005017 1.2e-20 105.5 111 58.6
BcaC01g03529 Brassica carinata HOM05D004210 ORTHO05D005017 2.5e-07 61.2 109 41.3
Nitab4.5_0002913g0040 Nicotiana tabacum HOM05D005323 ORTHO05D006820 1.6e-06 58.5 221 26.7
Nitab4.5_0000285g0060 Nicotiana tabacum HOM05D005323 ORTHO05D006820 4.7e-06 57.0 221 26.7
Peaxi162Scf00883g00035 Petunia axillaris HOM05D005323 ORTHO05D006820 4.7e-06 57.0 221 25.8


User provided reference genes

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