Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 3.3e-104 381.7 193 100.0
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 3.0e-89 332.0 193 83.4
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 2.1e-87 325.9 193 80.3
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 2.8e-87 325.5 193 80.8
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 1.4e-86 323.2 193 80.3
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 9.0e-86 320.5 190 80.0
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 1.2e-85 320.1 192 79.7
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 4.5e-85 318.2 193 77.7
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 5.8e-85 317.8 193 81.9
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 7.6e-85 317.4 190 80.5
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 7.6e-85 317.4 192 78.6
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 2.9e-84 315.5 188 82.4
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 4.9e-84 314.7 193 77.2
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 1.4e-83 313.2 194 79.9
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 1.9e-83 312.8 190 77.4
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 5.5e-83 311.2 193 77.2
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 5.5e-83 311.2 192 76.6
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 1.6e-82 309.7 185 79.5
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 2.1e-82 309.3 190 78.9
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 6.1e-82 307.8 185 78.9
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 3.0e-81 305.4 193 75.1
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 3.0e-81 305.4 212 71.7
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 3.9e-81 305.1 193 75.6
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 1.9e-80 302.8 193 76.7
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 7.4e-80 300.8 189 78.8
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 3.7e-79 298.5 176 81.2
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 3.7e-79 298.5 189 75.7
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 4.8e-79 298.1 192 73.4
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 8.2e-79 297.4 193 75.6
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 1.8e-78 296.2 190 73.2
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 2.4e-78 295.8 193 72.0
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 2.4e-78 295.8 191 73.3
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 2.4e-78 295.8 192 72.4
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 5.3e-78 294.7 235 63.4
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 5.3e-78 294.7 193 74.1
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 9.0e-78 293.9 193 75.1
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 9.0e-78 293.9 189 71.4
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 1.5e-77 293.1 190 72.1
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 3.4e-77 292.0 189 70.9
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 4.5e-77 291.6 185 74.6
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 5.9e-77 291.2 189 72.0
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 5.9e-77 291.2 188 72.3
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 5.9e-77 291.2 189 74.1
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 7.7e-77 290.8 191 75.4
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 2.2e-76 289.3 193 72.0
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 2.2e-76 289.3 185 76.2
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 3.8e-76 288.5 193 71.0
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 5.0e-76 288.1 190 71.6
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 5.0e-76 288.1 189 72.5
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 6.5e-76 287.7 191 67.5
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 1.1e-75 287.0 193 73.6
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 1.1e-75 287.0 193 73.1
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 7.2e-75 284.3 193 72.0
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 2.1e-74 282.7 185 70.3
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 2.7e-74 282.3 185 72.4
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 4.6e-74 281.6 185 75.1
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 1.0e-73 280.4 191 72.8
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 5.1e-73 278.1 193 73.1
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 2.0e-72 276.2 189 67.2
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 2.0e-72 276.2 185 68.1
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 4.8e-71 271.6 177 71.2
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 1.8e-70 269.6 189 67.2
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 2.4e-70 269.2 182 69.8
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 1.2e-69 266.9 175 75.4
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 1.2e-69 266.9 172 77.9
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 4.5e-69 265.0 182 68.7
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 1.7e-68 263.1 167 73.1
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 3.8e-68 261.9 154 81.2
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 1.2e-66 256.9 167 70.7
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 1.6e-66 256.5 189 62.4
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 1.4e-65 253.4 154 78.6
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 2.3e-65 252.7 164 75.0
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 2.3e-65 252.7 164 75.0
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 8.8e-65 250.8 230 58.3
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 2.2e-63 246.1 160 75.0
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 8.2e-63 244.2 153 76.5
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 2.6e-61 239.2 209 58.9
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 1.7e-55 219.9 138 76.8
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 2.8e-55 219.2 138 76.8
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 3.1e-54 215.7 208 57.2
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 1.5e-51 206.8 128 78.1
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 8.8e-49 197.6 125 74.4
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 7.5e-48 194.5 126 73.8
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 3.1e-46 189.1 153 66.7
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 9.4e-43 177.6 109 79.8
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 1.4e-41 173.7 103 80.6
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 5.2e-41 171.8 215 45.1
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 3.6e-34 149.1 89 83.1
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 8.0e-34 147.9 133 60.9
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 1.4e-33 147.1 135 57.8
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 8.3e-31 137.9 79 83.5
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 1.7e-28 130.2 189 41.8
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 1.1e-27 127.5 70 87.1
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 4.3e-27 125.6 76 77.6
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 5.8e-24 115.2 140 47.1
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 4.9e-23 112.1 73 71.2
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 1.4e-22 110.5 130 40.8
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 2.0e-21 106.7 60 86.7
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 2.0e-21 106.7 190 35.3
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 5.0e-20 102.1 183 35.0
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 1.1e-19 100.9 183 33.9
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 2.8e-18 96.3 185 33.5
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 9.8e-16 87.8 79 58.2
arahy.Tifrunner.gnm1.ann1.9GY3HT Arachis hypogaea HOM05D006972 ORTHO05D008519 3.7e-15 85.9 74 60.8
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 4.9e-15 85.5 135 40.7
Lsat_1_v5_gn_8_30121 Lactuca sativa HOM05D006972 ORTHO05D008519 8.3e-15 84.7 60 68.3
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 1.1e-14 84.3 170 34.7
MD02G1111700 Malus domestica HOM05D006972 ORTHO05D008519 1.5e-11 73.9 172 32.0
arahy.Tifrunner.gnm1.ann1.BGC890 Arachis hypogaea HOM05D006972 ORTHO05D008519 5.2e-09 65.5 61 54.1
arahy.Tifrunner.gnm1.ann1.A1T4XS Arachis hypogaea HOM05D006972 ORTHO05D008519 5.8e-08 62.0 59 54.2
AagrBONN_evm.TU.Sc2ySwM_228.4669 Anthoceros agrestis HOM05D006972 ORTHO05D008519 1.4e-06 57.4 64 39.1
RcHm_v2.0_Chr5g0015211 Rosa chinensis HOM05D006972 ORTHO05D008519 1.4e-06 57.4 33 75.8
Lsat_1_v5_gn_3_12301 Lactuca sativa HOM05D035019 ORTHO05D008519 2.4e-06 56.6 33 78.8
Lsat_1_v5_gn_8_143201 Lactuca sativa HOM05D035019 ORTHO05D008519 2.4e-06 56.6 33 78.8
Migut.L00776 Erythranthe guttata HOM05D006972 ORTHO05D008519 4.1e-06 55.8 47 57.4
Lsat_1_v5_gn_4_168241 Lactuca sativa HOM05D035019 ORTHO05D008519 5.4e-06 55.5 33 78.8


User provided reference genes

Program Settings