Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012418.1 Olea europaea HOM05D000228 ORTHO05D002228 7.4e-71 270.4 133 100.0
Migut.N02711 Erythranthe guttata HOM05D000228 ORTHO05D002228 8.0e-33 144.1 132 57.6
MSTRG.24333 Avicennia marina HOM05D000228 ORTHO05D002228 6.8e-32 141.0 134 59.7
Oeu043578.1 Olea europaea HOM05D000228 ORTHO05D002228 1.3e-27 126.7 123 57.7
Dinv39311 Davidia involucrata HOM05D000228 ORTHO05D002228 2.5e-26 122.5 132 53.0
SalBow7G4292 Salvia bowleyana HOM05D000228 ORTHO05D002228 1.2e-25 120.2 131 53.4
Dinv35955 Davidia involucrata HOM05D000228 ORTHO05D002228 2.1e-25 119.4 134 52.2
Solyc04g078850.4 Solanum lycopersicum HOM05D000228 ORTHO05D002228 2.1e-25 119.4 137 52.6
Sopen04g032450 Solanum pennellii HOM05D000228 ORTHO05D002228 2.1e-25 119.4 137 52.6
PGSC0003DMG400008012 Solanum tuberosum HOM05D000228 ORTHO05D002228 6.1e-25 117.9 137 51.8
Hma1.2p1_2046F.1_g312400 Hydrangea macrophylla HOM05D000228 ORTHO05D002228 1.0e-24 117.1 131 52.7
Hma1.2p1_0360F.1_g135540 Hydrangea macrophylla HOM05D000228 ORTHO05D002228 1.8e-24 116.3 131 52.7
CAN.G1030.8 Capsicum annuum HOM05D000228 ORTHO05D002228 3.0e-24 115.5 138 50.7
unitig_37.g12987 Utricularia gibba HOM05D000228 ORTHO05D002228 1.2e-23 113.6 133 51.1
SGA_v2.0_scaffold28G11775 Striga asiatica HOM05D000228 ORTHO05D002228 2.4e-21 105.9 132 50.0
CSS0038859 Camellia sinensis var. sinensis HOM05D000228 ORTHO05D002228 4.1e-21 105.1 136 49.3
Nitab4.5_0002760g0040 Nicotiana tabacum HOM05D000228 ORTHO05D002228 9.1e-21 104.0 144 47.2
Lsat_1_v5_gn_4_126140 Lactuca sativa HOM05D000228 ORTHO05D002228 7.7e-20 100.9 136 53.7
Nitab4.5_0000287g0230 Nicotiana tabacum HOM05D000228 ORTHO05D002228 3.8e-19 98.6 146 45.9
EL10As7g23740 Beta vulgaris HOM05D000228 ORTHO05D002228 1.9e-18 96.3 114 47.4
Cc10_g04080 Coffea canephora HOM05D000228 ORTHO05D002228 2.5e-18 95.9 136 46.3
Migut.C00573 Erythranthe guttata HOM05D000228 ORTHO05D002228 5.5e-18 94.7 136 44.1
AUR62043209 Chenopodium quinoa HOM05D000228 ORTHO05D002228 4.7e-17 91.7 97 52.6
Thecc.08G006100 Theobroma cacao HOM05D000228 ORTHO05D002228 4.7e-17 91.7 129 45.0
Actinidia22634 Actinidia chinensis HOM05D000228 ORTHO05D002228 6.1e-17 91.3 134 46.3
Ciclev10002377m.g Citrus clementina HOM05D000228 ORTHO05D002228 6.1e-17 91.3 121 46.3
TAR381G1359 Trochodendron aralioides HOM05D000228 ORTHO05D002228 1.0e-16 90.5 140 47.9
vmacro21516 Vaccinium macrocarpon HOM05D000228 ORTHO05D002228 1.4e-16 90.1 135 45.9
AUR62031367 Chenopodium quinoa HOM05D000228 ORTHO05D002228 1.8e-16 89.7 132 42.4
SGA_v2.0_scaffold14G06999 Striga asiatica HOM05D000228 ORTHO05D002228 4.0e-16 88.6 132 40.9
Cpa.g.sc49.25 Carica papaya HOM05D000228 ORTHO05D002228 1.2e-15 87.0 122 44.3
Actinidia23283 Actinidia chinensis HOM05D000228 ORTHO05D002228 3.4e-15 85.5 134 44.0
MD15G1082000 Malus domestica HOM05D000228 ORTHO05D002228 5.7e-15 84.7 122 45.9
Prupe.1G434700 Prunus persica HOM05D000228 ORTHO05D002228 5.7e-15 84.7 121 45.5
COL.COLO4_26519 Corchorus olitorius HOM05D000531 ORTHO05D000877 1.7e-14 83.2 120 41.7
Gohir.D02G091400 Gossypium hirsutum HOM05D000228 ORTHO05D002228 2.8e-14 82.4 130 41.5
Nn1g04844 Nelumbo nucifera HOM05D000228 ORTHO05D002228 2.8e-14 82.4 134 47.0
TAR628G1624 Trochodendron aralioides HOM05D000228 ORTHO05D002228 3.7e-14 82.0 137 45.3
MD08G1099700 Malus domestica HOM05D000228 ORTHO05D002228 4.9e-14 81.6 134 45.5
Sed0023264 Sechium edule HOM05D000228 ORTHO05D002228 6.3e-14 81.3 104 48.1
Haze_18017 Corylus avellana HOM05D000228 ORTHO05D002228 8.3e-14 80.9 135 45.9
RcHm_v2.0_Chr6g0308021 Rosa chinensis HOM05D000228 ORTHO05D002228 8.3e-14 80.9 110 47.3
Gorai.005G102400 Gossypium raimondii HOM05D000228 ORTHO05D002228 1.4e-13 80.1 120 42.5
Sed0006832 Sechium edule HOM05D000228 ORTHO05D002228 1.8e-13 79.7 102 51.0
ATR1102G002 Amborella trichopoda HOM05D000228 ORTHO05D002228 4.1e-13 78.6 121 47.9
Rhsim06G0050600 Rhododendron simsii HOM05D000228 ORTHO05D002228 5.4e-13 78.2 138 46.4
Rhsim06G0050500 Rhododendron simsii HOM05D000228 ORTHO05D002228 1.2e-12 77.0 138 45.7
FvH4_2g34340 Fragaria vesca HOM05D000228 ORTHO05D002228 2.0e-12 76.3 129 41.1
PSO541G1766 Papaver somniferum HOM05D000228 ORTHO05D002228 2.0e-12 76.3 106 46.2
Carub.0001s3574 Capsella rubella HOM05D000228 ORTHO05D002228 3.5e-12 75.5 73 54.8
MELO3C016755.2 Cucumis melo HOM05D000228 ORTHO05D002228 4.5e-12 75.1 99 48.5
Gohir.A03G076600 Gossypium hirsutum HOM05D000228 ORTHO05D002228 4.5e-12 75.1 132 40.2
CiPaw.15G055700 Carya illinoinensis HOM05D000228 ORTHO05D002228 5.9e-12 74.7 79 54.4
ClCG05G019910 Citrullus lanatus HOM05D000228 ORTHO05D002228 5.9e-12 74.7 122 41.8
CsaV3_4G034350 Cucumis sativus L. HOM05D000228 ORTHO05D002228 5.9e-12 74.7 99 50.5
Duzib116G0299 Durio zibethinus HOM05D000228 ORTHO05D002228 5.9e-12 74.7 114 42.1
TWI36G1241 Tripterygium wilfordii HOM05D000228 ORTHO05D002228 5.9e-12 74.7 127 41.7
CARHR036450 Cardamine hirsuta HOM05D000228 ORTHO05D002228 7.8e-12 74.3 134 39.6
FAN15G0189 Fragaria x ananassa HOM05D000228 ORTHO05D002228 7.8e-12 74.3 129 40.3
FAN27G1478 Fragaria x ananassa HOM05D000228 ORTHO05D002228 1.0e-11 73.9 113 43.4
FAN20G0515 Fragaria x ananassa HOM05D000228 ORTHO05D002228 1.3e-11 73.6 113 43.4
Gohir.D06G017300 Gossypium hirsutum HOM05D000228 ORTHO05D002228 1.3e-11 73.6 120 40.8
Gorai.010G020200 Gossypium raimondii HOM05D000228 ORTHO05D002228 1.3e-11 73.6 120 40.8
Lsat_1_v5_gn_6_112221 Lactuca sativa HOM05D000228 ORTHO05D002228 1.7e-11 73.2 126 45.2
PSO675G4588 Papaver somniferum HOM05D000228 ORTHO05D002228 1.7e-11 73.2 106 44.3
Aqoxy6G01311 Aquilegia oxysepala HOM05D000228 ORTHO05D002228 2.3e-11 72.8 99 48.5
ECA246G0493 Erigeron canadensis HOM05D000228 ORTHO05D002228 2.3e-11 72.8 125 38.4
BcaC07g37261 Brassica carinata HOM05D000228 ORTHO05D002228 3.9e-11 72.0 106 45.3
C08p06920 Brassica napus HOM05D000228 ORTHO05D002228 3.9e-11 72.0 106 45.3
BolC8t47534H Brassica oleracea HOM05D000228 ORTHO05D002228 3.9e-11 72.0 106 45.3
Manes.05G174300 Manihot esculenta HOM05D000228 ORTHO05D002228 3.9e-11 72.0 135 43.0
Eucgr.F00221 Eucalyptus grandis HOM05D000228 ORTHO05D002228 5.0e-11 71.6 103 45.6
MBI06_g02562_MAGBIO Magnolia biondii HOM05D000228 ORTHO05D002228 5.0e-11 71.6 87 49.4
BcaB04g17566 Brassica carinata HOM05D000228 ORTHO05D002228 6.6e-11 71.2 106 40.6
FAN24G1516 Fragaria x ananassa HOM05D000228 ORTHO05D002228 6.6e-11 71.2 129 38.8
HanXRQChr16g0508131 Helianthus annuus HOM05D000228 ORTHO05D002228 6.6e-11 71.2 107 42.1
CANSAT25G1965 Cannabis sativa HOM05D000228 ORTHO05D002228 8.6e-11 70.9 126 38.9
Duzib093G1063 Durio zibethinus HOM05D000228 ORTHO05D002228 8.6e-11 70.9 130 40.0
TWI56G1409 Tripterygium wilfordii HOM05D000228 ORTHO05D002228 8.6e-11 70.9 89 47.2
CANSAT01G0429 Cannabis sativa HOM05D000228 ORTHO05D002228 1.1e-10 70.5 90 48.9
Gohir.A06G018900 Gossypium hirsutum HOM05D000228 ORTHO05D002228 1.1e-10 70.5 120 40.0
DCAR_019450 Daucus carota HOM05D000228 ORTHO05D002228 1.9e-10 69.7 76 52.6
Sp1g34120 Schrenkiella parvula HOM05D000228 ORTHO05D002228 1.9e-10 69.7 73 50.7
Atru.chr13.702 Acer truncatum HOM05D000228 ORTHO05D002228 2.5e-10 69.3 122 35.2
A08p06130 Brassica napus HOM05D000228 ORTHO05D002228 9.5e-10 67.4 106 42.5
BraA08t32613Z Brassica rapa HOM05D000228 ORTHO05D002228 9.5e-10 67.4 106 42.5
Sabra14G0019400 Salix brachista HOM05D000228 ORTHO05D002228 9.5e-10 67.4 123 44.7
FvH4_2g34360 Fragaria vesca HOM05D000228 ORTHO05D002228 1.2e-09 67.0 129 37.2
Psat5g043000 Pisum sativum HOM05D000228 ORTHO05D002228 1.2e-09 67.0 75 53.3
Potri.014G028300 Populus trichocarpa HOM05D000228 ORTHO05D002228 1.2e-09 67.0 123 43.9
DCAR_020926 Daucus carota HOM05D000228 ORTHO05D002228 1.6e-09 66.6 76 48.7
Glyma.04G039200 Glycine max HOM05D000228 ORTHO05D002228 1.6e-09 66.6 107 41.1
Hund12944 Selenicereus undatus HOM05D000228 ORTHO05D002228 1.6e-09 66.6 95 45.3
QL02p004706 Quercus lobata HOM05D000228 ORTHO05D002228 2.8e-09 65.9 148 36.5
THA.LOC104822851 Tarenaya hassleriana HOM05D000228 ORTHO05D002228 3.6e-09 65.5 88 44.3
Phvul.009G065400 Phaseolus vulgaris HOM05D000228 ORTHO05D002228 4.7e-09 65.1 113 42.5
AL1G53030 Arabidopsis lyrata HOM05D000228 ORTHO05D002228 8.0e-09 64.3 134 37.3
ECA232G4002 Erigeron canadensis HOM05D000228 ORTHO05D002228 8.0e-09 64.3 37 78.4
Lalb_Chr23g0267031 Lupinus albus HOM05D000228 ORTHO05D002228 1.8e-08 63.2 29 93.1
Lj1g0007198 Lotus japonicus HOM05D000228 ORTHO05D002228 2.3e-08 62.8 72 51.4
AT1G45230 Arabidopsis thaliana HOM05D000228 ORTHO05D002228 3.1e-08 62.4 73 45.2
Ca_15946_v3 Cicer arietinum L. HOM05D000228 ORTHO05D002228 3.1e-08 62.4 73 50.7
Lj4C772T8 Lonicera japonica HOM05D000228 ORTHO05D002228 3.1e-08 62.4 138 42.0
Lj4A59G43 Lonicera japonica HOM05D000228 ORTHO05D002228 4.0e-08 62.0 67 58.2
VMungo1309G0667 Vigna mungo HOM05D000228 ORTHO05D002228 4.0e-08 62.0 113 42.5
Sc02g0007170 Simmondsia chinensis HOM05D000228 ORTHO05D002228 5.2e-08 61.6 81 50.6
Potri.002G125700 Populus trichocarpa HOM05D000228 ORTHO05D002228 6.8e-08 61.2 124 38.7
PGR083G1615 Punica granatum HOM05D000228 ORTHO05D002228 8.9e-08 60.8 144 33.3
CDE06G0709 Ceratophyllum demersum HOM05D000228 ORTHO05D002228 2.0e-07 59.7 73 46.6
Thhalv10011763m.g Eutrema salsugineum HOM05D000228 ORTHO05D002228 2.0e-07 59.7 73 43.8
CDE05G2231 Ceratophyllum demersum HOM05D000228 ORTHO05D002228 2.6e-07 59.3 141 37.6
CDE02G4011 Ceratophyllum demersum HOM05D000228 ORTHO05D002228 3.4e-07 58.9 73 45.2
Medtr3g101770 Medicago truncatula HOM05D000228 ORTHO05D002228 3.4e-07 58.9 79 46.8
Os02g0766000 Oryza sativa ssp. japonica HOM05D000228 ORTHO05D002228 3.4e-07 58.9 42 66.7
Sabra02G0098500 Salix brachista HOM05D000228 ORTHO05D002228 3.4e-07 58.9 124 38.7
Zm00001eb193650 Zea mays HOM05D000228 ORTHO05D002228 4.4e-07 58.5 50 58.0
arahy.Tifrunner.gnm1.ann1.QD1C5V Arachis hypogaea HOM05D000228 ORTHO05D002228 5.8e-07 58.2 64 51.6
CiPaw.07G145400 Carya illinoinensis HOM05D000228 ORTHO05D002228 5.8e-07 58.2 29 86.2
arahy.Tifrunner.gnm1.ann1.C2B3ZI Arachis hypogaea HOM05D000228 ORTHO05D002228 3.7e-06 55.5 64 51.6
TPR.G24186 Trifolium pratense HOM05D000228 ORTHO05D002228 3.7e-06 55.5 42 61.9
HPP92_016720 Vanilla planifolia HOM05D000228 ORTHO05D002228 3.7e-06 55.5 128 34.4
Atru.chr3.329 Acer truncatum HOM05D000228 ORTHO05D002228 4.9e-06 55.1 76 46.1
Peaxi162Scf00252g00311 Petunia axillaris HOM05D000228 ORTHO05D002228 4.9e-06 55.1 135 37.8


User provided reference genes

Program Settings