Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 3.6e-120 434.9 211 100.0
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 8.6e-106 387.1 211 86.7
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 1.1e-105 386.7 210 87.1
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 8.0e-104 380.6 211 85.8
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 1.0e-103 380.2 211 85.3
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 4.0e-103 378.3 211 85.8
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 4.0e-103 378.3 211 83.4
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 6.8e-103 377.5 211 85.3
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 8.9e-103 377.1 211 84.4
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 8.9e-103 377.1 211 83.4
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 1.2e-102 376.7 211 84.8
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 1.2e-102 376.7 211 82.9
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 2.6e-102 375.6 211 83.9
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 2.6e-102 375.6 211 82.9
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 1.7e-101 372.9 211 82.5
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 1.7e-101 372.9 211 83.4
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 2.2e-101 372.5 211 83.4
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 2.2e-101 372.5 211 82.5
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 2.9e-101 372.1 211 83.4
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 4.9e-101 371.3 211 83.4
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 1.4e-100 369.8 211 82.5
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 3.2e-100 368.6 210 82.9
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 5.4e-100 367.9 211 82.0
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 5.4e-100 367.9 210 82.9
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 7.0e-100 367.5 211 81.5
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 1.2e-99 366.7 211 81.5
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 2.0e-99 365.9 211 81.0
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 2.0e-99 365.9 210 82.9
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 2.7e-99 365.5 211 82.0
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 2.7e-99 365.5 211 81.5
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 2.7e-99 365.5 211 81.5
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 3.5e-99 365.2 210 81.0
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 3.5e-99 365.2 210 81.9
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 4.6e-99 364.8 211 81.0
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 6.0e-99 364.4 211 82.5
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 6.0e-99 364.4 210 82.4
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 1.0e-98 363.6 210 81.9
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 1.3e-98 363.2 211 82.0
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 2.3e-98 362.5 211 81.5
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 6.6e-98 360.9 211 81.0
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 8.6e-98 360.5 210 81.0
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 1.1e-97 360.1 236 73.7
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 1.5e-97 359.8 210 79.5
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 1.5e-97 359.8 210 80.0
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 1.9e-97 359.4 240 75.8
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 2.5e-97 359.0 211 79.1
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 3.3e-97 358.6 211 80.6
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 4.3e-97 358.2 211 78.7
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 4.3e-97 358.2 211 80.6
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 9.5e-97 357.1 211 81.0
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 1.2e-96 356.7 211 78.7
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.6e-96 356.3 203 82.8
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 3.6e-96 355.1 211 80.6
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 3.6e-96 355.1 211 81.0
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 3.6e-96 355.1 211 81.0
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 3.6e-96 355.1 211 80.1
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 6.2e-96 354.4 211 80.1
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 6.2e-96 354.4 211 80.6
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 6.2e-96 354.4 211 81.0
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 8.0e-96 354.0 210 78.1
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 1.8e-95 352.8 210 78.1
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 2.3e-95 352.4 211 79.1
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 2.3e-95 352.4 210 78.1
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 3.1e-95 352.1 210 77.1
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 3.1e-95 352.1 210 77.6
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 4.0e-95 351.7 211 80.6
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 4.0e-95 351.7 211 79.6
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 4.0e-95 351.7 211 77.3
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 6.8e-95 350.9 210 79.0
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 8.9e-95 350.5 210 79.0
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 8.9e-95 350.5 209 76.1
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 1.5e-94 349.7 210 76.2
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 1.5e-94 349.7 211 78.2
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 1.5e-94 349.7 210 76.2
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 2.6e-94 349.0 211 79.1
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 2.6e-94 349.0 211 79.1
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 4.4e-94 348.2 211 80.1
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 5.8e-94 347.8 211 78.7
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 7.5e-94 347.4 211 77.7
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 2.2e-93 345.9 211 79.1
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 4.9e-93 344.7 209 78.0
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 4.9e-93 344.7 211 79.1
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 6.4e-93 344.4 210 76.2
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 6.4e-93 344.4 210 77.6
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 2.4e-92 342.4 211 79.6
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 3.2e-92 342.0 191 84.3
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 4.1e-92 341.7 202 77.7
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 9.2e-92 340.5 235 72.3
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 9.2e-92 340.5 202 76.2
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 1.2e-91 340.1 211 78.7
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 4.6e-91 338.2 210 76.7
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 3.0e-90 335.5 211 75.4
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 1.1e-89 333.6 215 76.3
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 1.9e-89 332.8 201 80.6
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 1.9e-89 332.8 263 64.3
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 6.8e-87 324.3 199 78.4
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 8.9e-87 323.9 210 74.8
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 3.4e-86 322.0 317 54.9
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 4.1e-84 315.1 190 77.4
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 1.3e-77 293.5 175 78.9
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 4.9e-77 291.6 211 66.8
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 1.9e-76 289.7 210 64.3
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 5.4e-76 288.1 200 70.0
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 3.5e-75 285.4 212 68.4
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 3.5e-75 285.4 212 68.4
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 3.0e-74 282.3 170 77.1
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 2.1e-67 259.6 211 62.6
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 2.1e-59 233.0 208 54.8
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 1.8e-55 219.9 211 56.9
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 1.8e-55 219.9 230 47.0
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 2.9e-45 186.0 226 44.7
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 6.3e-40 168.3 97 82.5
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 1.8e-39 166.8 203 48.8
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 6.9e-39 164.9 162 56.8
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 1.7e-37 160.2 97 80.4
Potri.001G150800 Populus trichocarpa HOM05D006150 ORTHO05D007745 3.0e-34 149.4 107 68.2
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 1.2e-30 137.5 81 75.3
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 8.5e-29 131.3 66 83.3
Sabra01G0120800 Salix brachista HOM05D006150 ORTHO05D007745 6.7e-18 95.1 86 58.1
FAN18G0603 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.3e-16 90.9 58 74.1
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 2.4e-15 86.7 59 66.1
Oeu040463.1 Olea europaea HOM05D001574 ORTHO05D000708 9.1e-15 84.7 58 74.1
Cpa.g.sc98.35 Carica papaya HOM05D006150 ORTHO05D007745 2.6e-14 83.2 56 67.9
MELO3C000773.2 Cucumis melo HOM05D006150 ORTHO05D007745 5.7e-09 65.5 40 80.0
Lsat_1_v5_gn_2_23540 Lactuca sativa HOM05D002379 ORTHO05D003469 5.7e-09 65.5 70 52.9
Lsat_1_v5_gn_8_14120 Lactuca sativa HOM05D002379 ORTHO05D021531 5.7e-09 65.5 70 52.9
Lsat_1_v5_gn_9_81181 Lactuca sativa HOM05D002379 ORTHO05D003469 5.7e-09 65.5 70 52.9
Lsat_1_v5_gn_6_74120 Lactuca sativa HOM05D006150 ORTHO05D233887 3.1e-07 59.7 33 78.8
GSVIVG01021810001 Vitis vinifera HOM05D006150 ORTHO05D007745 4.1e-07 59.3 43 65.1


User provided reference genes

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