Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012341.1 Olea europaea HOM05D005917 ORTHO05D007517 3.1e-282 974.5 518 100.0
MSTRG.14928 Avicennia marina HOM05D005917 ORTHO05D007517 9.2e-210 733.8 524 74.4
SalBow2G0814 Salvia bowleyana HOM05D005917 ORTHO05D007517 1.2e-206 723.4 522 73.9
SalBow2G2149 Salvia bowleyana HOM05D005917 ORTHO05D007517 3.2e-202 708.8 521 72.7
SGA_v2.0_scaffold302G47853 Striga asiatica HOM05D005917 ORTHO05D000086 1.1e-197 693.7 520 72.3
Migut.M00025 Erythranthe guttata HOM05D005917 ORTHO05D007517 8.3e-195 684.1 524 70.8
Cc02_g11180 Coffea canephora HOM05D005917 ORTHO05D007517 1.3e-184 650.2 542 66.8
CAN.G854.3 Capsicum annuum HOM05D005917 ORTHO05D007517 3.4e-180 635.6 524 67.4
PGSC0003DMG400006133 Solanum tuberosum HOM05D005917 ORTHO05D007517 1.3e-179 633.6 528 65.9
Sopen07g024410 Solanum pennellii HOM05D005917 ORTHO05D007517 3.8e-179 632.1 528 65.5
Nitab4.5_0005699g0010 Nicotiana tabacum HOM05D005917 ORTHO05D007517 4.9e-179 631.7 531 65.5
Solyc07g047980.3 Solanum lycopersicum HOM05D005917 ORTHO05D007517 1.9e-178 629.8 528 65.5
Nitab4.5_0000441g0160 Nicotiana tabacum HOM05D005917 ORTHO05D007517 7.8e-177 624.4 530 65.5
Hma1.2p1_0405F.1_g145810 Hydrangea macrophylla HOM05D005917 ORTHO05D007517 3.9e-176 622.1 520 66.5
Thecc.01G189700 Theobroma cacao HOM05D005917 ORTHO05D007517 5.1e-176 621.7 527 64.3
Peaxi162Scf00776g00033 Petunia axillaris HOM05D005917 ORTHO05D007517 8.7e-176 620.9 523 65.6
unitig_747.g21169 Utricularia gibba HOM05D005917 ORTHO05D007517 2.5e-175 619.4 524 65.5
Gohir.A11G150200 Gossypium hirsutum HOM05D005917 ORTHO05D007517 3.3e-175 619.0 521 64.7
Lj1P791T65 Lonicera japonica HOM05D005917 ORTHO05D007517 5.6e-175 618.2 525 67.2
Gorai.007G167200 Gossypium raimondii HOM05D005917 ORTHO05D007517 7.3e-175 617.8 521 65.1
Sc21g0000840 Simmondsia chinensis HOM05D005917 ORTHO05D007517 4.8e-174 615.1 518 65.8
Gohir.D11G156700 Gossypium hirsutum HOM05D005917 ORTHO05D007517 8.1e-174 614.4 521 64.9
Duzib133G0758 Durio zibethinus HOM05D005917 ORTHO05D007517 1.1e-173 614.0 526 63.7
Ah.14g082780 Amaranthus hybridus HOM05D005917 ORTHO05D007517 5.8e-172 608.2 518 65.1
TWI36G1171 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 1.7e-171 606.7 527 64.9
QL08p028769 Quercus lobata HOM05D005917 ORTHO05D007517 2.2e-171 606.3 521 64.9
Potri.002G222100 Populus trichocarpa HOM05D005917 ORTHO05D007517 6.4e-171 604.7 529 64.3
EL10Ac9g22738 Beta vulgaris HOM05D005917 ORTHO05D007517 5.4e-170 601.7 518 64.7
Cfa014247 Carpinus fangiana HOM05D005917 ORTHO05D007517 5.4e-170 601.7 523 64.1
Manes.13G063400 Manihot esculenta HOM05D005917 ORTHO05D007517 7.1e-170 601.3 521 64.5
DCAR_019712 Daucus carota HOM05D005917 ORTHO05D007517 9.3e-170 600.9 524 64.5
Atru.chr6.3353 Acer truncatum HOM05D005917 ORTHO05D007517 1.2e-169 600.5 524 64.3
AUR62017525 Chenopodium quinoa HOM05D005917 ORTHO05D007517 2.1e-169 599.7 526 63.7
CiPaw.04G195700 Carya illinoinensis HOM05D005917 ORTHO05D007517 6.0e-169 598.2 525 63.0
PGR042G1386 Punica granatum HOM05D005917 ORTHO05D007517 1.0e-168 597.4 523 64.4
Rhsim06G0173900 Rhododendron simsii HOM05D005917 ORTHO05D007517 1.0e-168 597.4 525 63.2
Nn1g08522 Nelumbo nucifera HOM05D005917 ORTHO05D007517 1.3e-168 597.0 524 63.5
TWI18G0259 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 1.3e-168 597.0 524 63.5
vmacro12107 Vaccinium macrocarpon HOM05D005917 ORTHO05D007517 2.3e-168 596.3 523 64.4
Ciclev10014942m.g Citrus clementina HOM05D005917 ORTHO05D007517 3.9e-168 595.5 521 62.6
COL.COLO4_33026 Corchorus olitorius HOM05D005917 ORTHO05D007517 6.7e-168 594.7 524 63.0
HanXRQChr04g0126661 Helianthus annuus HOM05D005917 ORTHO05D007517 1.9e-167 593.2 518 63.1
Lsat_1_v5_gn_7_96161 Lactuca sativa HOM05D005917 ORTHO05D007517 1.9e-167 593.2 528 64.0
ECA236G4414 Erigeron canadensis HOM05D005917 ORTHO05D007517 4.3e-167 592.0 531 62.5
Sabra02G0169500 Salix brachista HOM05D005917 ORTHO05D007517 7.4e-167 591.3 528 62.7
CsaV3_7G002690 Cucumis sativus L. HOM05D005917 ORTHO05D007517 3.6e-166 589.0 526 63.7
ClCG02G002680 Citrullus lanatus HOM05D005917 ORTHO05D007517 6.2e-166 588.2 533 63.2
Haze_12696 Corylus avellana HOM05D005917 ORTHO05D007517 1.4e-165 587.0 515 63.5
TAR624G1058 Trochodendron aralioides HOM05D005917 ORTHO05D007517 6.9e-165 584.7 530 61.7
TPR.G15058 Trifolium pratense HOM05D005917 ORTHO05D007517 2.6e-164 582.8 521 61.0
Aqoxy1G02033 Aquilegia oxysepala HOM05D005917 ORTHO05D007517 4.5e-164 582.0 520 61.3
Lalb_Chr17g0349121 Lupinus albus HOM05D005917 ORTHO05D007517 4.5e-164 582.0 527 61.5
AUR62015069 Chenopodium quinoa HOM05D005917 ORTHO05D007517 5.8e-164 581.6 473 65.8
Medtr5g097510 Medicago truncatula HOM05D005917 ORTHO05D007517 7.6e-164 581.3 527 61.1
MBI16_g11554_MAGBIO Magnolia biondii HOM05D005917 ORTHO05D007517 9.9e-164 580.9 526 61.2
Ca_06463_v3 Cicer arietinum L. HOM05D005917 ORTHO05D007517 1.3e-163 580.5 531 60.5
Sed0016848 Sechium edule HOM05D005917 ORTHO05D007517 1.7e-163 580.1 531 63.1
Eucgr.K00656 Eucalyptus grandis HOM05D005917 ORTHO05D007517 2.2e-163 579.7 521 61.6
arahy.Tifrunner.gnm1.ann1.V8M1HU Arachis hypogaea HOM05D005917 ORTHO05D007517 5.5e-162 575.1 524 62.0
PSO700G0235 Papaver somniferum HOM05D005917 ORTHO05D007517 2.7e-161 572.8 530 60.9
Cpa.g.sc136.15 Carica papaya HOM05D005917 ORTHO05D007517 3.5e-161 572.4 530 61.1
MD09G1121500 Malus domestica HOM05D005917 ORTHO05D007517 6.0e-161 571.6 523 63.1
Psat0s736g0080 Pisum sativum HOM05D005917 ORTHO05D007517 1.0e-160 570.9 530 60.0
Manes.12G062101 Manihot esculenta HOM05D005917 ORTHO05D007517 6.7e-160 568.2 520 61.7
SHI10119 Sapria himalayana HOM05D005917 ORTHO05D007517 2.5e-159 566.2 522 60.0
Prupe.3G202200 Prunus persica HOM05D005917 ORTHO05D007517 1.6e-158 563.5 523 61.0
MD17G1112500 Malus domestica HOM05D005917 ORTHO05D007517 2.8e-158 562.8 523 62.1
Potri.014G164200 Populus trichocarpa HOM05D005917 ORTHO05D007517 3.7e-158 562.4 533 60.0
PSO761G0708 Papaver somniferum HOM05D005917 ORTHO05D007517 6.2e-158 561.6 530 59.8
arahy.Tifrunner.gnm1.ann1.410RPC Arachis hypogaea HOM05D005917 ORTHO05D007517 4.0e-157 558.9 517 61.5
Glyma.14G006700 Glycine max HOM05D005917 ORTHO05D007517 5.3e-157 558.5 518 60.4
VMungo0647G1382 Vigna mungo HOM05D005917 ORTHO05D007517 6.9e-157 558.1 528 59.3
Aa31LG5G18370 Aethionema arabicum HOM05D005917 ORTHO05D007517 1.2e-156 557.4 533 58.5
LjContig00081g0012334 Lotus japonicus HOM05D005917 ORTHO05D007517 1.5e-156 557.0 533 58.2
Dinv07857 Davidia involucrata HOM05D005917 ORTHO05D007517 3.4e-156 555.8 520 63.3
Glyma.02G306400 Glycine max HOM05D005917 ORTHO05D007517 1.0e-155 554.3 518 60.4
AT3G07790 Arabidopsis thaliana HOM05D005917 ORTHO05D007517 1.3e-155 553.9 491 62.3
Phvul.008G286200 Phaseolus vulgaris HOM05D005917 ORTHO05D007517 1.7e-155 553.5 520 59.0
Thhalv10022183m.g Eutrema salsugineum HOM05D005917 ORTHO05D007517 2.9e-155 552.7 494 61.3
AL3G19160 Arabidopsis lyrata HOM05D005917 ORTHO05D007517 6.5e-155 551.6 491 62.1
HPP92_002896 Vanilla planifolia HOM05D005917 ORTHO05D007517 1.9e-154 550.1 535 57.8
FAN14G0404 Fragaria x ananassa HOM05D005917 ORTHO05D007517 9.3e-154 547.7 523 59.3
HPP92_002885 Vanilla planifolia HOM05D005917 ORTHO05D007517 9.3e-154 547.7 536 58.2
FAN05G4769 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.2e-153 547.4 523 59.7
FAN09G3123 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.2e-153 547.4 523 59.5
CARHR082500 Cardamine hirsuta HOM05D005917 ORTHO05D007517 2.7e-153 546.2 490 61.0
Sp3g06720 Schrenkiella parvula HOM05D005917 ORTHO05D007517 3.5e-153 545.8 493 60.2
FvH4_6g41230 Fragaria vesca HOM05D005917 ORTHO05D007517 1.3e-152 543.9 523 58.9
TAR626G1403 Trochodendron aralioides HOM05D005917 ORTHO05D007517 1.8e-152 543.5 472 63.1
THA.LOC104802624 Tarenaya hassleriana HOM05D005917 ORTHO05D007517 2.3e-152 543.1 529 58.2
Carub.0003s0737 Capsella rubella HOM05D005917 ORTHO05D007517 3.9e-152 542.3 492 61.6
RcHm_v2.0_Chr2g0156781 Rosa chinensis HOM05D005917 ORTHO05D007517 6.7e-152 541.6 518 58.7
BcaC09g47947 Brassica carinata HOM05D005917 ORTHO05D007517 4.5e-148 528.9 486 60.5
BolC1t05532H Brassica oleracea HOM05D005917 ORTHO05D007517 1.7e-147 526.9 488 60.7
CDE02G0007 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 3.8e-147 525.8 495 59.0
FAN02G4512 Fragaria x ananassa HOM05D005917 ORTHO05D007517 3.8e-147 525.8 522 58.0
BraA01t04362Z Brassica rapa HOM05D005917 ORTHO05D007517 1.4e-146 523.9 487 60.4
C05p59510 Brassica napus HOM05D005917 ORTHO05D007517 4.2e-146 522.3 486 61.3
BraA05t22776Z Brassica rapa HOM05D005917 ORTHO05D007517 1.0e-144 517.7 489 60.3
BolC5t34607H Brassica oleracea HOM05D005917 ORTHO05D007517 1.8e-144 516.9 486 60.7
A05p40430 Brassica napus HOM05D005917 ORTHO05D007517 2.3e-144 516.5 489 60.1
BcaC05g29571 Brassica carinata HOM05D005917 ORTHO05D007517 3.0e-144 516.2 488 60.5
Actinidia09775 Actinidia chinensis HOM05D005917 ORTHO05D007517 6.7e-144 515.0 466 62.7
Os06g0502900 Oryza sativa ssp. japonica HOM05D005917 ORTHO05D007517 7.4e-143 511.5 533 57.6
Zm00001eb209430 Zea mays HOM05D005917 ORTHO05D007517 4.6e-137 492.3 521 56.2
Zm00001eb209420 Zea mays HOM05D005917 ORTHO05D007517 1.0e-136 491.1 521 56.0
Zm00001eb403830 Zea mays HOM05D005917 ORTHO05D007517 1.7e-134 483.8 523 55.1
CSS0026358 Camellia sinensis var. sinensis HOM05D005917 ORTHO05D007517 2.8e-134 483.0 520 56.9
SEGI_07273 Sequoiadendron giganteum HOM05D005917 ORTHO05D007517 3.7e-126 456.1 504 52.8
GSVIVG01030044001 Vitis vinifera HOM05D005917 ORTHO05D000188 4.1e-125 452.6 484 55.4
Pp3c5_28640 Physcomitrium patens HOM05D005917 ORTHO05D007517 1.2e-119 434.5 502 53.4
ATR0665G318 Amborella trichopoda HOM05D005917 ORTHO05D007517 3.5e-116 422.9 523 50.9
Mapoly0016s0028 Marchantia polymorpha HOM05D005917 ORTHO05D007517 1.0e-115 421.4 512 50.0
SMO347G0414 Selaginella moellendorffii HOM05D005917 ORTHO05D007517 1.9e-106 390.6 493 48.7
CDE09G1298 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 9.5e-106 388.3 299 67.2
Manes.12G052600 Manihot esculenta HOM05D005917 ORTHO05D007517 1.8e-104 384.0 485 49.9
Migut.L01336 Erythranthe guttata HOM05D005917 ORTHO05D007517 1.1e-101 374.8 516 50.2
CBR_g39617 Chara braunii HOM05D005917 ORTHO05D007517 2.8e-89 333.6 545 41.5
MELO3C024210.2 Cucumis melo HOM05D005917 ORTHO05D007517 1.5e-74 284.6 298 58.1
HanXRQChr11g0328131 Helianthus annuus HOM05D005917 ORTHO05D007517 4.9e-62 243.0 291 48.5
Sed0013022 Sechium edule HOM05D005917 ORTHO05D007517 9.6e-50 202.2 203 59.1
AagrBONN_evm.TU.Sc2ySwM_344.1277 Anthoceros agrestis HOM05D005917 ORTHO05D007517 9.0e-48 195.7 344 40.1
TPR.G18819 Trifolium pratense HOM05D005917 ORTHO05D007517 2.7e-28 131.0 295 35.6
FAN14G5926 Fragaria x ananassa HOM05D005917 ORTHO05D007517 2.7e-20 104.4 83 62.7
MCO15G396 Micromonas commoda HOM05D005917 ORTHO05D007517 1.4e-19 102.1 432 27.5
Prupe.3G225800 Prunus persica HOM05D005917 ORTHO05D007517 3.0e-19 100.9 101 55.4
Cre11.g482050 Chlamydomonas reinhardtii HOM05D005917 ORTHO05D007517 2.0e-18 98.2 479 25.3
Manes.16G064350 Manihot esculenta HOM05D005917 ORTHO05D007517 7.0e-16 89.7 73 61.6
FAN02G4549 Fragaria x ananassa HOM05D005917 ORTHO05D007517 2.0e-15 88.2 53 71.7
CAN.G244.10 Capsicum annuum HOM05D000180 ORTHO05D000099 5.0e-14 83.6 60 68.3
Nn6g32048 Nelumbo nucifera HOM05D005917 ORTHO05D007517 7.4e-10 69.7 53 71.7
Nn6g32049 Nelumbo nucifera HOM05D005917 ORTHO05D007517 1.7e-09 68.6 65 53.8
Cfa024500 Carpinus fangiana HOM05D005917 ORTHO05D007517 3.1e-08 64.3 175 33.1


User provided reference genes

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