Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012338.1 Olea europaea HOM05D005150 ORTHO05D006070 2.4e-50 201.8 97 100.0
Oeu040478.2 Olea europaea HOM05D005150 ORTHO05D006070 5.8e-33 144.1 98 77.6
Oeu029950.1 Olea europaea HOM05D005150 ORTHO05D006070 1.9e-20 102.4 99 61.6
Gohir.A07G189900 Gossypium hirsutum HOM05D005150 ORTHO05D006070 3.7e-19 98.2 101 57.4
Gohir.D07G196100 Gossypium hirsutum HOM05D005150 ORTHO05D006070 3.7e-19 98.2 101 57.4
Gorai.001G219600 Gossypium raimondii HOM05D005150 ORTHO05D006070 3.7e-19 98.2 101 57.4
Medtr7g058970 Medicago truncatula HOM05D005150 ORTHO05D006070 6.2e-19 97.4 102 50.0
QL08p029214 Quercus lobata HOM05D005150 ORTHO05D006070 8.2e-19 97.1 98 54.1
Hma1.2p1_0133F.1_g061080 Hydrangea macrophylla HOM05D005150 ORTHO05D006070 6.9e-18 94.0 99 52.5
TPR.G12632 Trifolium pratense HOM05D005150 ORTHO05D006070 6.9e-18 94.0 102 48.0
Actinidia21452 Actinidia chinensis HOM05D005150 ORTHO05D006070 1.2e-17 93.2 103 50.5
Phvul.006G020400 Phaseolus vulgaris HOM05D005150 ORTHO05D006070 1.2e-17 93.2 98 52.0
CiPaw.03G276700 Carya illinoinensis HOM05D005150 ORTHO05D006070 2.0e-17 92.4 101 52.5
Glyma.13G073800 Glycine max HOM05D005150 ORTHO05D006070 2.6e-17 92.0 98 52.0
Cfa014266 Carpinus fangiana HOM05D005150 ORTHO05D006070 7.6e-17 90.5 97 51.5
Duzib133G1369 Durio zibethinus HOM05D005150 ORTHO05D006070 1.0e-16 90.1 103 52.4
Thecc.01G187900 Theobroma cacao HOM05D005150 ORTHO05D006070 1.0e-16 90.1 104 52.9
Nn1g07416 Nelumbo nucifera HOM05D005150 ORTHO05D006070 1.3e-16 89.7 101 52.5
CAN.G584.30 Capsicum annuum HOM05D005150 ORTHO05D006070 2.2e-16 89.0 97 51.5
Haze_12715 Corylus avellana HOM05D005150 ORTHO05D006070 2.9e-16 88.6 97 50.5
Atru.chr6.3335 Acer truncatum HOM05D005150 ORTHO05D006070 4.9e-16 87.8 113 46.0
CSS0010457 Camellia sinensis var. sinensis HOM05D005150 ORTHO05D006070 4.9e-16 87.8 101 55.4
CSS0040672 Camellia sinensis var. sinensis HOM05D005150 ORTHO05D006070 4.9e-16 87.8 101 55.4
Lsat_1_v5_gn_9_105581 Lactuca sativa HOM05D005150 ORTHO05D006070 6.5e-16 87.4 99 52.5
MELO3C018891.2 Cucumis melo HOM05D005150 ORTHO05D006070 8.4e-16 87.0 100 47.0
Sabra14G0124000 Salix brachista HOM05D005150 ORTHO05D006070 8.4e-16 87.0 99 51.5
Lj6g0009976 Lotus japonicus HOM05D005150 ORTHO05D006070 1.1e-15 86.7 96 51.0
Sed0026674 Sechium edule HOM05D005150 ORTHO05D006070 1.1e-15 86.7 93 48.4
HanXRQChr10g0306371 Helianthus annuus HOM05D005150 ORTHO05D006070 1.4e-15 86.3 100 49.0
Lalb_Chr04g0249481 Lupinus albus HOM05D005150 ORTHO05D006070 1.4e-15 86.3 100 46.0
Sed0012024 Sechium edule HOM05D005150 ORTHO05D006070 1.4e-15 86.3 99 49.5
CsaV3_7G002850 Cucumis sativus L. HOM05D005150 ORTHO05D006070 1.9e-15 85.9 99 46.5
PSO541G4821 Papaver somniferum HOM05D005150 ORTHO05D006070 3.2e-15 85.1 100 45.0
Nn1g03285 Nelumbo nucifera HOM05D005150 ORTHO05D006070 4.2e-15 84.7 102 49.0
Gohir.A11G150900 Gossypium hirsutum HOM05D005150 ORTHO05D006070 5.5e-15 84.3 101 46.5
Gohir.A07G176012 Gossypium hirsutum HOM05D005150 ORTHO05D006070 7.1e-15 84.0 102 51.0
HanXRQChr17g0535431 Helianthus annuus HOM05D005150 ORTHO05D006070 7.1e-15 84.0 100 52.0
Medtr5g088550 Medicago truncatula HOM05D005150 ORTHO05D006070 7.1e-15 84.0 98 44.9
ECA234G4664 Erigeron canadensis HOM05D005150 ORTHO05D006070 9.3e-15 83.6 100 50.0
Gorai.007G167900 Gossypium raimondii HOM05D005150 ORTHO05D006070 9.3e-15 83.6 97 45.4
DCAR_012901 Daucus carota HOM05D005150 ORTHO05D006070 1.2e-14 83.2 97 49.5
Phvul.008G205400 Phaseolus vulgaris HOM05D005150 ORTHO05D006070 1.2e-14 83.2 96 43.8
Potri.002G222900 Populus trichocarpa HOM05D005150 ORTHO05D006070 1.2e-14 83.2 99 45.5
Rhsim06G0172200 Rhododendron simsii HOM05D005150 ORTHO05D006070 1.2e-14 83.2 100 49.0
VMungo0647G0767 Vigna mungo HOM05D005150 ORTHO05D006070 1.2e-14 83.2 96 43.8
COL.COLO4_25851 Corchorus olitorius HOM05D005150 ORTHO05D006070 1.6e-14 82.8 84 54.8
Gorai.001G194000 Gossypium raimondii HOM05D005150 ORTHO05D006070 1.6e-14 82.8 101 48.5
arahy.Tifrunner.gnm1.ann1.CR4AH5 Arachis hypogaea HOM05D005150 ORTHO05D006070 2.1e-14 82.4 97 45.4
arahy.Tifrunner.gnm1.ann1.V5U7H6 Arachis hypogaea HOM05D005150 ORTHO05D006070 2.1e-14 82.4 97 45.4
Gohir.D11G157400 Gossypium hirsutum HOM05D005150 ORTHO05D006070 2.1e-14 82.4 97 44.3
ClCG02G002530 Citrullus lanatus HOM05D005150 ORTHO05D006070 2.7e-14 82.0 58 63.8
ClCG02G002570 Citrullus lanatus HOM05D005150 ORTHO05D006070 2.7e-14 82.0 58 63.8
Aqoxy1G04044 Aquilegia oxysepala HOM05D005150 ORTHO05D006070 3.5e-14 81.6 97 46.4
PSO675G4632 Papaver somniferum HOM05D005150 ORTHO05D006070 4.6e-14 81.3 100 45.0
LjContig00564g0005952 Lotus japonicus HOM05D005150 ORTHO05D006070 6.0e-14 80.9 97 45.4
Potri.014G162400 Populus trichocarpa HOM05D005150 ORTHO05D006070 6.0e-14 80.9 101 49.5
Glyma.14G039800 Glycine max HOM05D005150 ORTHO05D006070 7.9e-14 80.5 96 43.8
HanXRQChr04g0126761 Helianthus annuus HOM05D005150 ORTHO05D006070 1.3e-13 79.7 97 47.4
RcHm_v2.0_Chr2g0156971 Rosa chinensis HOM05D005150 ORTHO05D006070 1.3e-13 79.7 102 47.1
Sopen07g002670 Solanum pennellii HOM05D005150 ORTHO05D006070 1.3e-13 79.7 97 46.4
FAN05G2177 Fragaria x ananassa HOM05D005150 ORTHO05D006070 1.8e-13 79.3 101 44.6
Rhsim06G0172300 Rhododendron simsii HOM05D005150 ORTHO05D006070 1.8e-13 79.3 100 49.0
Solyc07g006590.1 Solanum lycopersicum HOM05D005150 ORTHO05D006070 1.8e-13 79.3 96 45.8
TPR.G14637 Trifolium pratense HOM05D005150 ORTHO05D006070 1.8e-13 79.3 102 46.1
FAN02G0634 Fragaria x ananassa HOM05D005150 ORTHO05D006070 2.3e-13 79.0 101 44.6
HanXRQChr03g0075721 Helianthus annuus HOM05D005150 ORTHO05D006070 2.3e-13 79.0 98 48.0
Lj1g0017552 Lotus japonicus HOM05D005150 ORTHO05D006070 2.3e-13 79.0 97 50.5
DCAR_032165 Daucus carota HOM05D005150 ORTHO05D006070 3.0e-13 78.6 100 46.0
Lalb_Chr19g0125521 Lupinus albus HOM05D005150 ORTHO05D006070 3.0e-13 78.6 100 47.0
Rhsim04G0044800 Rhododendron simsii HOM05D005150 ORTHO05D006070 3.0e-13 78.6 98 46.9
vmacro12127 Vaccinium macrocarpon HOM05D005150 ORTHO05D006070 3.0e-13 78.6 100 45.0
CSS0044074 Camellia sinensis var. sinensis HOM05D005150 ORTHO05D006070 5.1e-13 77.8 95 44.2
Aa31sc697G10 Aethionema arabicum HOM05D005150 ORTHO05D006070 6.7e-13 77.4 97 46.4
FvH4_6g41440 Fragaria vesca HOM05D005150 ORTHO05D006070 6.7e-13 77.4 100 43.0
Cpa.g.sc136.7 Carica papaya HOM05D005150 ORTHO05D006070 8.7e-13 77.0 104 43.3
Migut.M00011 Erythranthe guttata HOM05D005150 ORTHO05D006070 8.7e-13 77.0 91 50.5
Hma1.2p1_0405F.1_g145660 Hydrangea macrophylla HOM05D005150 ORTHO05D006070 1.1e-12 76.6 102 46.1
Lsat_1_v5_gn_7_95641 Lactuca sativa HOM05D005150 ORTHO05D006070 1.1e-12 76.6 97 43.3
Glyma.02G276100 Glycine max HOM05D005150 ORTHO05D006070 1.5e-12 76.3 99 43.4
AL7G44580 Arabidopsis lyrata HOM05D005150 ORTHO05D006070 2.5e-12 75.5 98 46.9
ECA240G3606 Erigeron canadensis HOM05D005150 ORTHO05D006070 2.5e-12 75.5 100 47.0
Lsat_1_v5_gn_5_124661 Lactuca sativa HOM05D005150 ORTHO05D006070 2.5e-12 75.5 97 45.4
Prupe.3G204400 Prunus persica HOM05D005150 ORTHO05D006070 2.5e-12 75.5 107 43.9
Ciclev10017035m.g Citrus clementina HOM05D005150 ORTHO05D006070 3.3e-12 75.1 97 42.3
DCAR_021114 Daucus carota HOM05D005150 ORTHO05D006070 4.3e-12 74.7 96 44.8
Ah.01g002180 Amaranthus hybridus HOM05D005150 ORTHO05D006070 7.4e-12 73.9 100 41.0
Sc06g0009750 Simmondsia chinensis HOM05D005150 ORTHO05D006070 9.7e-12 73.6 96 45.8
PGR142G3730 Punica granatum HOM05D005150 ORTHO05D006070 1.6e-11 72.8 97 46.4
Manes.12G062667 Manihot esculenta HOM05D005150 ORTHO05D006070 2.2e-11 72.4 98 44.9
Manes.12G062700 Manihot esculenta HOM05D005150 ORTHO05D006070 2.2e-11 72.4 98 44.9
Ah.14g082900 Amaranthus hybridus HOM05D005150 ORTHO05D006070 2.8e-11 72.0 102 41.2
A04p09910 Brassica napus HOM05D005150 ORTHO05D006070 2.8e-11 72.0 97 42.3
BraA04t16654Z Brassica rapa HOM05D005150 ORTHO05D006070 2.8e-11 72.0 97 42.3
Duzib138G1375 Durio zibethinus HOM05D005150 ORTHO05D006070 4.8e-11 71.2 100 44.0
MD17G1110500 Malus domestica HOM05D005150 ORTHO05D006070 6.3e-11 70.9 74 48.6
Manes.13G063792 Manihot esculenta HOM05D005150 ORTHO05D006070 6.3e-11 70.9 103 43.7
BolC4t25919H Brassica oleracea HOM05D005150 ORTHO05D006070 8.2e-11 70.5 97 41.2
AUR62015079 Chenopodium quinoa HOM05D005150 ORTHO05D006070 1.1e-10 70.1 105 42.9
AUR62017541 Chenopodium quinoa HOM05D005150 ORTHO05D006070 1.1e-10 70.1 105 42.9
MD09G1119700 Malus domestica HOM05D005150 ORTHO05D006070 1.4e-10 69.7 61 54.1
BcaC02g09491 Brassica carinata HOM05D005150 ORTHO05D006070 2.4e-10 68.9 53 60.4
C04p43410 Brassica napus HOM05D005150 ORTHO05D006070 2.4e-10 68.9 53 60.4
Eucgr.K00667 Eucalyptus grandis HOM05D005150 ORTHO05D006070 2.4e-10 68.9 101 44.6
AUR62000791 Chenopodium quinoa HOM05D005150 ORTHO05D006070 3.1e-10 68.6 100 43.0
ECA236G2208 Erigeron canadensis HOM05D005150 ORTHO05D006070 3.1e-10 68.6 100 46.0
Carub.0007s3148 Capsella rubella HOM05D005150 ORTHO05D006070 4.1e-10 68.2 53 62.3
ATR0712G027 Amborella trichopoda HOM05D005150 ORTHO05D006070 5.3e-10 67.8 107 43.0
CARHR216910 Cardamine hirsuta HOM05D005150 ORTHO05D006070 5.3e-10 67.8 53 62.3
AUR62005176 Chenopodium quinoa HOM05D005150 ORTHO05D006070 6.9e-10 67.4 100 42.0
AT2G04795 Arabidopsis thaliana HOM05D005150 ORTHO05D006070 1.2e-09 66.6 97 39.2
TAR629G0945 Trochodendron aralioides HOM05D005150 ORTHO05D006070 1.2e-09 66.6 90 46.7
THA.LOC104808855 Tarenaya hassleriana HOM05D005150 ORTHO05D006070 1.5e-09 66.2 98 41.8
THA.LOC104826613 Tarenaya hassleriana HOM05D005150 ORTHO05D006070 2.0e-09 65.9 98 43.9
EL10Ac9g22759 Beta vulgaris HOM05D005150 ORTHO05D006070 2.6e-09 65.5 103 36.9
Sp7g06500 Schrenkiella parvula HOM05D005150 ORTHO05D006070 4.5e-09 64.7 53 56.6
Dinv07836 Davidia involucrata HOM05D005150 ORTHO05D006070 5.9e-09 64.3 87 47.1
CARHR102770 Cardamine hirsuta HOM05D005150 ORTHO05D006070 7.6e-09 63.9 97 40.2
ClCG02G009450 Citrullus lanatus HOM05D005150 ORTHO05D006070 7.6e-09 63.9 95 40.0
TWI36G0863 Tripterygium wilfordii HOM05D005150 ORTHO05D006070 1.3e-08 63.2 100 40.0
MELO3C019368.2 Cucumis melo HOM05D005150 ORTHO05D006070 1.7e-08 62.8 95 36.8
Aa31sc53G30 Aethionema arabicum HOM05D005150 ORTHO05D006070 2.2e-08 62.4 97 38.1
CsaV3_6G009360 Cucumis sativus L. HOM05D005150 ORTHO05D006070 2.9e-08 62.0 95 37.9
Nitab4.5_0000244g0100 Nicotiana tabacum HOM05D005150 ORTHO05D006070 2.9e-08 62.0 86 40.7
TAR624G1342 Trochodendron aralioides HOM05D005150 ORTHO05D006070 2.9e-08 62.0 86 40.7
Peaxi162Scf00942g00037 Petunia axillaris HOM05D005150 ORTHO05D006070 3.8e-08 61.6 95 40.0
vmacro12128 Vaccinium macrocarpon HOM05D005150 ORTHO05D006070 5.0e-08 61.2 102 41.2
AL3G42390 Arabidopsis lyrata HOM05D005150 ORTHO05D006070 6.5e-08 60.8 97 35.1
A03p44460 Brassica napus HOM05D005150 ORTHO05D006070 1.4e-07 59.7 97 36.1
BraA03t13579Z Brassica rapa HOM05D005150 ORTHO05D006070 1.4e-07 59.7 97 36.1
Sp3g23410 Schrenkiella parvula HOM05D005150 ORTHO05D006070 1.4e-07 59.7 101 37.6
AT5G35732 Arabidopsis thaliana HOM05D005150 ORTHO05D006070 2.5e-07 58.9 89 41.6
BcaB08g34491 Brassica carinata HOM05D005150 ORTHO05D006070 3.2e-07 58.5 53 50.9
MBI16_g31702_MAGBIO Magnolia biondii HOM05D005150 ORTHO05D006070 7.2e-07 57.4 92 38.0
Ah.06g189600 Amaranthus hybridus HOM05D005150 ORTHO05D006070 1.2e-06 56.6 96 38.5
BcaB06g26977 Brassica carinata HOM05D025437 ORTHO05D006070 4.6e-06 54.7 41 58.5
BcaC01g06899 Brassica carinata HOM05D005150 ORTHO05D006070 6.1e-06 54.3 53 47.2
C03p55240 Brassica napus HOM05D005150 ORTHO05D006070 6.1e-06 54.3 53 47.2
BolC3t17797H Brassica oleracea HOM05D005150 ORTHO05D006070 6.1e-06 54.3 53 47.2
FAN14G4944 Fragaria x ananassa HOM05D008097 ORTHO05D006070 6.1e-06 54.3 64 39.1


User provided reference genes

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