Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 2.5e-212 741.9 388 100.0
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.4e-58 231.1 423 42.1
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 9.4e-58 228.4 394 42.9
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 7.9e-57 225.3 432 42.4
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 2.3e-56 223.8 344 46.8
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 2.0e-55 220.7 304 48.7
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 9.7e-55 218.4 415 42.4
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 4.8e-54 216.1 385 43.1
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 1.1e-53 214.9 414 39.6
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 4.1e-53 213.0 410 38.8
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 5.9e-52 209.1 387 40.6
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 2.5e-50 203.8 408 39.5
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 2.5e-50 203.8 407 40.3
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 2.1e-49 200.7 354 43.2
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 2.7e-49 200.3 414 41.8
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 2.7e-49 200.3 413 40.4
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 3.6e-49 199.9 363 41.3
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 4.7e-49 199.5 363 42.1
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 4.7e-49 199.5 365 40.5
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 6.1e-49 199.1 395 40.0
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 8.0e-49 198.7 394 40.4
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 1.0e-48 198.4 384 42.4
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 1.0e-48 198.4 418 41.1
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 2.3e-48 197.2 418 41.1
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 3.9e-48 196.4 406 38.2
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 1.5e-47 194.5 395 41.3
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 2.6e-47 193.7 395 39.5
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 2.6e-47 193.7 386 42.0
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.3e-46 191.4 384 40.9
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 3.1e-45 186.8 273 44.3
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 1.2e-44 184.9 367 39.0
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 1.6e-44 184.5 391 38.1
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 2.0e-44 184.1 338 40.8
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 5.9e-44 182.6 415 37.3
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 1.7e-43 181.0 391 37.6
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 6.5e-43 179.1 302 44.7
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 4.2e-42 176.4 347 40.6
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 2.1e-41 174.1 395 39.5
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 2.7e-41 173.7 386 38.9
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 8.0e-41 172.2 381 39.6
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 2.3e-40 170.6 343 38.8
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 2.3e-40 170.6 403 37.5
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 3.0e-40 170.2 390 36.7
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 3.4e-39 166.8 384 38.3
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 5.7e-39 166.0 335 38.8
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 9.8e-39 165.2 399 35.3
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 1.7e-38 164.5 390 36.7
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 2.2e-38 164.1 384 39.1
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 4.8e-38 162.9 397 35.5
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 7.0e-37 159.1 265 42.6
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 3.5e-36 156.8 329 37.4
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 3.5e-36 156.8 349 38.4
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 4.5e-36 156.4 293 41.0
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 7.7e-36 155.6 348 36.8
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 7.7e-36 155.6 401 35.4
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 1.3e-35 154.8 376 32.7
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 1.7e-35 154.5 402 34.8
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 2.9e-35 153.7 388 35.6
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 8.5e-35 152.1 405 35.8
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 3.2e-34 150.2 348 35.6
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 4.2e-34 149.8 398 34.2
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 1.2e-33 148.3 340 36.8
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 3.6e-33 146.7 353 34.3
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 6.1e-33 146.0 386 36.0
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 1.0e-32 145.2 320 35.0
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 1.0e-32 145.2 387 33.9
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 2.3e-32 144.1 337 34.7
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 4.0e-32 143.3 336 34.8
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 4.0e-32 143.3 325 36.0
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 5.2e-32 142.9 397 33.8
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 5.2e-32 142.9 397 33.8
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 5.2e-32 142.9 330 36.7
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 6.8e-32 142.5 394 33.2
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 8.8e-32 142.1 301 38.9
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 1.5e-31 141.4 397 33.8
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 7.5e-31 139.0 409 34.2
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 9.8e-31 138.7 399 33.3
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 9.8e-31 138.7 338 36.1
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 6.3e-30 136.0 392 32.4
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 1.4e-29 134.8 389 33.4
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 1.8e-29 134.4 399 33.3
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 1.8e-29 134.4 397 31.5
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 2.4e-29 134.0 399 33.1
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 3.1e-29 133.7 391 32.5
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 1.6e-28 131.3 257 39.3
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 1.6e-28 131.3 348 33.0
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.6e-28 131.3 330 35.8
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 2.7e-28 130.6 386 32.1
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 2.7e-28 130.6 393 32.3
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 2.7e-28 130.6 416 31.5
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 3.5e-28 130.2 400 32.0
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 1.1e-26 125.2 334 32.6
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 1.1e-26 125.2 374 35.0
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 2.5e-26 124.0 339 33.3
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 4.2e-26 123.2 373 30.6
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 3.0e-24 117.1 382 32.2
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 1.2e-23 115.2 349 35.0
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 2.6e-23 114.0 273 35.2
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 3.4e-23 113.6 128 49.2
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 8.3e-22 109.0 395 30.9
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 4.1e-21 106.7 382 30.1
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 4.1e-21 106.7 399 29.3
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 5.4e-21 106.3 99 54.5
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 9.2e-21 105.5 332 31.6
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 2.7e-20 104.0 334 32.6
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 3.5e-20 103.6 355 30.4
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 7.8e-20 102.4 359 30.6
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 8.6e-19 99.0 96 51.0
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 8.9e-16 89.0 367 28.9
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 1.5e-15 88.2 396 25.8
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 1.7e-14 84.7 234 33.8
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 1.1e-13 82.0 309 29.8
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 1.2e-12 78.6 317 28.7
FAN07G1029 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.5e-10 71.6 164 39.0
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 5.6e-10 69.7 64 59.4
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 2.1e-09 67.8 84 46.4
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 2.8e-09 67.4 343 23.9
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 8.1e-09 65.9 56 53.6
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 1.1e-08 65.5 343 23.3
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 1.4e-08 65.1 154 38.3
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 2.3e-08 64.3 54 53.7
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 6.8e-08 62.8 76 40.8
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 4.4e-07 60.1 89 34.8
SMO356G0556 Selaginella moellendorffii HOM05D005773 ORTHO05D006930 7.5e-07 59.3 113 33.6
Aqoxy1G04021 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 9.8e-07 58.9 74 47.3
Pp3c17_20330 Physcomitrium patens HOM05D029403 ORTHO05D006930 2.2e-06 57.8 54 50.0
Aqoxy7G02275 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 3.7e-06 57.0 130 39.2


User provided reference genes

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