Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 8.0e-220 766.9 422 100.0
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 4.9e-185 651.4 412 87.9
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 1.3e-148 530.4 431 72.4
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 1.8e-147 526.6 429 72.7
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 4.9e-145 518.5 429 71.6
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 7.1e-144 514.6 414 73.7
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 1.0e-142 510.8 430 70.9
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 2.5e-141 506.1 430 70.7
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 1.6e-140 503.4 430 70.2
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 9.0e-139 497.7 426 70.7
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 3.4e-138 495.7 417 70.7
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 4.2e-136 488.8 432 68.8
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 1.8e-134 483.4 422 70.9
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 1.3e-132 477.2 430 69.5
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 3.7e-132 475.7 435 68.3
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 4.8e-132 475.3 416 69.0
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 8.2e-132 474.6 433 69.1
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 1.4e-131 473.8 432 67.4
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 5.3e-131 471.9 410 69.3
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 9.0e-131 471.1 427 67.9
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 7.6e-130 468.0 432 68.1
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 3.2e-128 462.6 449 64.8
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 4.2e-128 462.2 393 70.0
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 1.2e-127 460.7 387 71.6
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 7.9e-127 458.0 433 67.2
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 8.8e-126 454.5 434 64.5
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 8.8e-126 454.5 421 66.7
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 7.4e-125 451.4 405 68.6
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 3.7e-124 449.1 436 65.6
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 1.4e-123 447.2 450 59.6
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 4.1e-123 445.7 425 66.4
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 9.1e-123 444.5 396 69.9
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 1.5e-122 443.7 435 63.7
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 1.5e-122 443.7 396 69.9
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 1.5e-122 443.7 423 66.0
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 2.6e-122 443.0 430 65.1
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 7.7e-122 441.4 431 63.6
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 1.7e-121 440.3 417 65.5
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 2.2e-121 439.9 438 63.9
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 2.9e-121 439.5 396 69.2
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 1.1e-120 437.6 419 66.8
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 1.4e-120 437.2 457 58.9
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 2.1e-119 433.3 427 64.9
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 2.7e-119 433.0 433 63.3
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 2.7e-119 433.0 339 77.9
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 3.6e-119 432.6 427 64.9
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 4.7e-119 432.2 433 63.0
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 7.9e-119 431.4 401 67.6
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 2.3e-118 429.9 401 66.8
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 1.3e-116 424.1 379 68.6
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 6.3e-116 421.8 427 62.8
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 5.3e-115 418.7 420 63.6
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 5.3e-115 418.7 415 63.9
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 7.0e-115 418.3 430 64.4
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 4.5e-114 415.6 435 61.8
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 5.0e-113 412.1 408 62.3
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 8.5e-113 411.4 375 68.3
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 9.4e-112 407.9 327 75.8
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 1.2e-111 407.5 373 66.8
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 2.1e-111 406.8 386 65.8
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 6.1e-111 405.2 451 59.2
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 8.0e-111 404.8 416 60.1
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 1.8e-110 403.7 415 62.4
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 1.8e-110 403.7 427 61.4
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 1.8e-110 403.7 416 64.2
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 3.0e-110 402.9 445 58.2
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 3.9e-110 402.5 362 69.9
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 5.2e-110 402.1 392 64.3
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 5.2e-110 402.1 398 65.1
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 1.1e-109 401.0 382 64.4
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 3.3e-109 399.4 372 68.5
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 9.7e-109 397.9 374 67.1
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 1.7e-108 397.1 361 69.3
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 2.2e-108 396.7 379 66.0
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 2.2e-108 396.7 399 63.7
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 2.2e-108 396.7 425 61.9
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 8.2e-108 394.8 361 69.3
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 1.2e-106 391.0 409 62.6
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 4.5e-106 389.0 373 67.0
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 7.7e-106 388.3 363 69.1
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 1.3e-105 387.5 356 69.9
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 2.2e-105 386.7 375 67.7
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 6.5e-105 385.2 376 66.8
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 6.5e-105 385.2 376 66.8
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 1.9e-104 383.6 364 69.0
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 3.2e-104 382.9 357 69.7
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 3.2e-104 382.9 357 69.7
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 5.2e-102 375.6 352 67.3
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 6.7e-102 375.2 415 59.8
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 1.5e-101 374.0 349 69.6
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 9.7e-101 371.3 382 62.3
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 3.1e-99 366.3 326 70.9
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 3.1e-99 366.3 423 58.2
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 2.0e-98 363.6 320 70.3
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 8.5e-97 358.2 321 70.7
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 2.5e-96 356.7 299 66.6
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 3.0e-94 349.7 243 76.5
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 4.4e-93 345.9 255 72.9
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 2.8e-92 343.2 389 58.6
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 2.3e-89 333.6 353 62.0
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 2.9e-89 333.2 324 64.8
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 3.8e-81 306.2 347 60.8
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 2.1e-79 300.4 298 67.1
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 1.5e-72 277.7 181 81.8
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 5.1e-65 252.7 226 64.6
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 3.6e-63 246.5 357 44.8
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 2.9e-60 236.9 228 67.5
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 4.3e-56 223.0 308 48.4
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 5.2e-54 216.1 325 52.3
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 2.2e-52 210.7 317 47.3
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 3.8e-52 209.9 237 49.8
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 2.7e-50 203.8 133 80.5
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 1.9e-48 197.6 264 53.8
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 4.3e-48 196.4 300 48.7
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 9.6e-48 195.3 225 50.7
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 4.3e-40 169.9 243 42.0
QL02p058075 Quercus lobata HOM05D006243 ORTHO05D007688 1.2e-37 161.8 213 58.2
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 3.8e-36 156.8 122 70.5
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 7.9e-34 149.1 204 41.7
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 9.0e-30 135.6 77 89.6
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 5.5e-19 99.8 60 83.3
Actinidia17214 Actinidia chinensis HOM05D006243 ORTHO05D007688 9.3e-19 99.0 160 49.4
unitig_736.g22595 Utricularia gibba HOM05D006243 ORTHO05D007688 8.2e-15 85.9 146 36.3
Lsat_1_v5_gn_9_64341 Lactuca sativa HOM05D000326 ORTHO05D000312 5.5e-11 73.2 101 48.5
Hund13037 Selenicereus undatus HOM05D006243 ORTHO05D007688 1.5e-08 65.1 102 36.3


User provided reference genes

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