Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012237.1 Olea europaea HOM05D004964 ORTHO05D005918 5.9e-64 247.3 117 100.0
Oeu016533.1 Olea europaea HOM05D004964 ORTHO05D005918 3.4e-35 151.8 89 82.0
Sabra13G0043100 Salix brachista HOM05D004964 ORTHO05D005918 5.6e-14 81.3 101 43.6
PGSC0003DMG401006195 Solanum tuberosum HOM05D004964 ORTHO05D005918 1.2e-13 80.1 111 35.1
CAN.G588.60 Capsicum annuum HOM05D004964 ORTHO05D005918 3.6e-13 78.6 112 34.8
QL03p030425 Quercus lobata HOM05D004964 ORTHO05D005918 4.7e-13 78.2 101 42.6
QL03p029942 Quercus lobata HOM05D004964 ORTHO05D005918 8.1e-13 77.4 108 38.9
MSTRG.14348 Avicennia marina HOM05D004964 ORTHO05D005918 1.8e-12 76.3 53 66.0
Prupe.6G350300 Prunus persica HOM05D004964 ORTHO05D005918 1.8e-12 76.3 115 37.4
Peaxi162Scf00407g00626 Petunia axillaris HOM05D004964 ORTHO05D005918 4.0e-12 75.1 101 36.6
SalBow6G5984 Salvia bowleyana HOM05D004964 ORTHO05D005918 4.0e-12 75.1 60 56.7
Solyc01g111410.3 Solanum lycopersicum HOM05D004964 ORTHO05D005918 4.0e-12 75.1 100 36.0
QL03p029974 Quercus lobata HOM05D004964 ORTHO05D005918 8.9e-12 73.9 108 38.0
Migut.F00800 Erythranthe guttata HOM05D004964 ORTHO05D005918 1.2e-11 73.6 59 61.0
Sopen01g053470 Solanum pennellii HOM05D004964 ORTHO05D005918 1.5e-11 73.2 100 35.0
unitig_46.g18500 Utricularia gibba HOM05D004964 ORTHO05D005918 1.5e-11 73.2 87 43.7
unitig_47.g30763 Utricularia gibba HOM05D004964 ORTHO05D005918 1.5e-11 73.2 87 43.7
QL03p030283 Quercus lobata HOM05D004964 ORTHO05D005918 2.0e-11 72.8 111 36.9
Cc02_g08800 Coffea canephora HOM05D004964 ORTHO05D005918 2.6e-11 72.4 101 42.6
QL03p030145 Quercus lobata HOM05D004964 ORTHO05D005918 2.6e-11 72.4 99 40.4
vmacro10367 Vaccinium macrocarpon HOM05D004964 ORTHO05D005918 4.4e-11 71.6 101 37.6
Rhsim09G0136900 Rhododendron simsii HOM05D004964 ORTHO05D005918 5.8e-11 71.2 101 38.6
RcHm_v2.0_Chr3g0449661 Rosa chinensis HOM05D004964 ORTHO05D005918 5.8e-11 71.2 78 47.4
MD04G1230400 Malus domestica HOM05D004964 ORTHO05D005918 9.9e-11 70.5 115 35.7
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.7e-10 68.6 100 37.0
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.7e-10 68.6 100 37.0
Nitab4.5_0005396g0030 Nicotiana tabacum HOM05D004964 ORTHO05D005918 6.4e-10 67.8 82 39.0
Sed0000191 Sechium edule HOM05D004964 ORTHO05D005918 6.4e-10 67.8 72 43.1
MD12G1248000 Malus domestica HOM05D004964 ORTHO05D005918 8.3e-10 67.4 84 41.7
Nitab4.5_0013387g0040 Nicotiana tabacum HOM05D004964 ORTHO05D005918 1.1e-09 67.0 94 36.2
GSVIVG01023502001 Vitis vinifera HOM05D004964 ORTHO05D005918 2.4e-09 65.9 103 35.9
FvH4_6g01921 Fragaria vesca HOM05D004964 ORTHO05D005918 5.4e-09 64.7 80 41.2
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 5.4e-09 64.7 80 41.2
FAN14G5822 Fragaria x ananassa HOM05D004964 ORTHO05D005918 5.4e-09 64.7 80 41.2
TAR362G0358 Trochodendron aralioides HOM05D004964 ORTHO05D005918 7.1e-09 64.3 73 45.2
Manes.08G139500 Manihot esculenta HOM05D004964 ORTHO05D005918 9.2e-09 63.9 84 39.3
Lj2A43G39 Lonicera japonica HOM05D004964 ORTHO05D005918 2.7e-08 62.4 83 39.8
Haze_04423 Corylus avellana HOM05D004964 ORTHO05D005918 3.5e-08 62.0 68 47.1
SGA_v2.0_scaffold177G39428 Striga asiatica HOM05D004964 ORTHO05D005918 3.5e-08 62.0 74 45.9
CSS0014360 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 4.6e-08 61.6 74 39.2
SGA_v2.0_scaffold295G47511 Striga asiatica HOM05D004964 ORTHO05D005918 4.6e-08 61.6 77 46.8
Cpa.g.sc162.40 Carica papaya HOM05D004964 ORTHO05D005918 6.0e-08 61.2 70 41.4
Gohir.D08G234400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 6.0e-08 61.2 101 32.7
Cfa006356 Carpinus fangiana HOM05D004964 ORTHO05D005918 7.8e-08 60.8 41 61.0
Gorai.004G249200 Gossypium raimondii HOM05D004964 ORTHO05D005918 7.8e-08 60.8 101 32.7
Atru.chr2.987 Acer truncatum HOM05D004964 ORTHO05D005918 1.0e-07 60.5 45 55.6
Lsat_1_v5_gn_8_24860 Lactuca sativa HOM05D004964 ORTHO05D005918 1.0e-07 60.5 39 69.2
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.3e-07 60.1 100 36.0
Gohir.A08G217400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 1.3e-07 60.1 101 33.7
CSS0038343 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 1.7e-07 59.7 68 44.1
SGA_v2.0_scaffold26G11247 Striga asiatica HOM05D004964 ORTHO05D005918 2.3e-07 59.3 74 44.6
CARHR222860 Cardamine hirsuta HOM05D004964 ORTHO05D005918 3.0e-07 58.9 69 39.1
DCAR_022832 Daucus carota HOM05D004964 ORTHO05D005918 3.0e-07 58.9 74 40.5
HanXRQChr07g0204481 Helianthus annuus HOM05D004964 ORTHO05D005918 3.9e-07 58.5 44 54.5
CANSAT01G0497 Cannabis sativa HOM05D004964 ORTHO05D005918 5.1e-07 58.2 78 37.2
ECA233G3630 Erigeron canadensis HOM05D004964 ORTHO05D005918 5.1e-07 58.2 37 62.2
CARHR010210 Cardamine hirsuta HOM05D004964 ORTHO05D005918 6.6e-07 57.8 55 43.6
Eucgr.H04227 Eucalyptus grandis HOM05D004964 ORTHO05D005918 1.5e-06 56.6 101 31.7
BcaC06g34559 Brassica carinata HOM05D004964 ORTHO05D005918 1.9e-06 56.2 90 37.8
C07p27180 Brassica napus HOM05D004964 ORTHO05D005918 1.9e-06 56.2 90 37.8
BolC7t43245H Brassica oleracea HOM05D004964 ORTHO05D005918 1.9e-06 56.2 90 37.8
CiPaw.07G072600 Carya illinoinensis HOM05D004964 ORTHO05D005918 1.9e-06 56.2 66 40.9
MELO3C008708.2 Cucumis melo HOM05D004964 ORTHO05D005918 3.3e-06 55.5 73 39.7
Thecc.05G270700 Theobroma cacao HOM05D004964 ORTHO05D005918 3.3e-06 55.5 76 40.8
AL1G20790 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 4.3e-06 55.1 100 34.0
AL1G47560 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 4.3e-06 55.1 100 34.0
Carub.0001s0952 Capsella rubella HOM05D004964 ORTHO05D005918 5.6e-06 54.7 71 36.6
AL1G47570 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 9.5e-06 53.9 72 37.5
BcaC06g31621 Brassica carinata HOM05D004964 ORTHO05D005918 9.5e-06 53.9 90 36.7
A06p47210 Brassica napus HOM05D004964 ORTHO05D005918 9.5e-06 53.9 86 36.0
BraA06t27592Z Brassica rapa HOM05D004964 ORTHO05D005918 9.5e-06 53.9 86 36.0
Nn4g26424 Nelumbo nucifera HOM05D004964 ORTHO05D005918 9.5e-06 53.9 81 40.7


User provided reference genes

Program Settings