Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012210.1 Olea europaea HOM05D006739 ORTHO05D008402 1.0e-22 112.5 109 100.0
Cc10_g08260 Coffea canephora HOM05D008425 ORTHO05D010555 5.1e-19 100.1 74 89.2
Actinidia19612 Actinidia chinensis HOM05D006739 ORTHO05D008402 9.7e-18 95.9 74 89.2
Dinv22007 Davidia involucrata HOM05D006739 ORTHO05D008402 1.3e-17 95.5 108 88.0
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 2.2e-17 94.7 74 66.2
MBI16_g14339_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 1.7e-14 85.1 108 85.2
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 6.5e-14 83.2 73 78.1
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 1.1e-13 82.4 74 81.1
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 2.1e-12 78.2 39 84.6
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 7.9e-12 76.3 74 75.7
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 1.0e-11 75.9 74 73.0
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 3.0e-11 74.3 108 82.4
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 8.8e-11 72.8 38 81.6
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 1.5e-10 72.0 37 83.8
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 1.5e-10 72.0 74 74.3
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 3.3e-10 70.9 74 73.0
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 4.4e-10 70.5 74 47.3
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 4.4e-10 70.5 74 47.3
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 5.7e-10 70.1 74 62.2
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 1.3e-09 68.9 31 96.8
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 1.7e-09 68.6 72 72.2
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 1.7e-09 68.6 73 74.0
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 4.8e-09 67.0 70 41.4
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 6.3e-09 66.6 35 82.9
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 1.1e-08 65.9 74 68.9
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 1.4e-08 65.5 73 68.5
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 4.1e-08 63.9 74 67.6
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 5.3e-08 63.5 74 70.3
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 7.0e-08 63.2 74 68.9
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 7.0e-08 63.2 73 68.5
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 9.1e-08 62.8 74 43.2
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 1.2e-07 62.4 74 67.6
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.2e-07 62.4 67 49.3
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 3.5e-07 60.8 74 68.9
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 5.9e-07 60.1 74 70.3
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 7.7e-07 59.7 74 67.6
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 1.0e-06 59.3 26 92.3
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 1.0e-06 59.3 74 68.9
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 1.0e-06 59.3 74 67.6
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 1.3e-06 58.9 108 73.1
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 1.3e-06 58.9 108 77.8
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 1.7e-06 58.5 74 67.6
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 2.9e-06 57.8 73 67.1
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 5.0e-06 57.0 74 67.6
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 5.0e-06 57.0 74 67.6


User provided reference genes

Program Settings