Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 5.6e-65 250.8 124 100.0
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 1.2e-38 163.3 128 65.6
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 9.4e-36 153.7 122 63.9
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 3.6e-35 151.8 122 64.8
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 2.6e-33 145.6 96 75.0
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 1.7e-32 142.9 99 70.7
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 1.7e-32 142.9 101 70.3
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 3.7e-32 141.7 109 67.9
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 5.3e-31 137.9 109 66.1
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 1.2e-30 136.7 120 60.0
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 1.3e-29 133.3 101 66.3
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 1.3e-29 133.3 101 66.3
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 5.0e-29 131.3 100 64.0
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 1.1e-28 130.2 78 76.9
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 2.5e-28 129.0 96 65.6
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 2.5e-28 129.0 96 65.6
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 2.5e-28 129.0 96 65.6
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 5.5e-28 127.9 104 64.4
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 5.5e-28 127.9 68 80.9
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 1.2e-27 126.7 75 72.0
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 1.2e-27 126.7 92 67.4
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 1.6e-27 126.3 106 62.3
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 2.7e-27 125.6 109 56.9
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 3.6e-27 125.2 95 66.3
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 6.1e-27 124.4 75 73.3
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 8.0e-27 124.0 68 77.9
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 1.0e-26 123.6 108 55.6
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 1.0e-26 123.6 60 85.0
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 1.0e-26 123.6 107 60.7
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 1.8e-26 122.9 99 61.6
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 2.3e-26 122.5 61 85.2
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 4.0e-26 121.7 90 66.7
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 4.0e-26 121.7 113 54.9
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 5.2e-26 121.3 91 63.7
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 5.2e-26 121.3 101 60.4
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 8.8e-26 120.6 70 75.7
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.0e-25 119.4 132 50.0
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 2.0e-25 119.4 70 74.3
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 2.0e-25 119.4 83 63.9
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 2.6e-25 119.0 132 50.0
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 2.6e-25 119.0 89 66.3
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 2.6e-25 119.0 102 56.9
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 2.6e-25 119.0 100 60.0
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 3.3e-25 118.6 113 54.0
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 4.4e-25 118.2 60 81.7
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 4.4e-25 118.2 100 59.0
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 5.7e-25 117.9 100 59.0
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 5.7e-25 117.9 80 67.5
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 7.5e-25 117.5 99 61.6
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 1.3e-24 116.7 100 57.0
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 1.7e-24 116.3 78 70.5
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.7e-24 116.3 98 54.1
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.7e-24 116.3 103 52.4
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 1.7e-24 116.3 103 52.4
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 1.7e-24 116.3 64 75.0
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 1.7e-24 116.3 64 78.1
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 2.2e-24 115.9 111 50.5
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 2.2e-24 115.9 67 71.6
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 3.7e-24 115.2 71 71.8
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 6.3e-24 114.4 99 59.6
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 6.3e-24 114.4 70 75.7
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 6.3e-24 114.4 70 75.7
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 6.3e-24 114.4 65 75.4
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 8.2e-24 114.0 104 57.7
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 1.1e-23 113.6 96 60.4
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 1.4e-23 113.2 59 83.1
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 1.4e-23 113.2 59 83.1
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 1.8e-23 112.8 71 70.4
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 1.8e-23 112.8 86 62.8
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 1.8e-23 112.8 85 60.0
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 1.8e-23 112.8 92 57.6
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 2.4e-23 112.5 71 70.4
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 2.4e-23 112.5 73 65.8
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 3.1e-23 112.1 59 81.4
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 3.1e-23 112.1 106 53.8
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 4.1e-23 111.7 88 64.8
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 5.3e-23 111.3 97 60.8
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 5.3e-23 111.3 74 70.3
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 5.3e-23 111.3 84 64.3
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 7.0e-23 110.9 60 76.7
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 7.0e-23 110.9 70 71.4
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 7.0e-23 110.9 123 54.5
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 9.1e-23 110.5 93 62.4
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 9.1e-23 110.5 74 63.5
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 9.1e-23 110.5 86 62.8
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 9.1e-23 110.5 82 68.3
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 1.2e-22 110.2 100 58.0
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 2.7e-22 109.0 82 62.2
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 4.5e-22 108.2 94 57.4
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 4.5e-22 108.2 96 58.3
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 5.9e-22 107.8 55 78.2
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 5.9e-22 107.8 55 78.2
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 7.7e-22 107.5 86 60.5
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 1.0e-21 107.1 87 59.8
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 2.9e-21 105.5 71 69.0
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 1.5e-20 103.2 137 44.5
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 5.5e-20 101.3 52 76.9
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 1.8e-18 96.3 74 60.8
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.3e-18 95.9 50 80.0
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 9.8e-17 90.5 100 45.0
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 1.4e-15 86.7 47 80.9
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 4.1e-15 85.1 69 55.1
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 5.5e-12 74.7 86 43.0
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 1.4e-07 60.1 67 49.3


User provided reference genes

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