Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012151.1 Olea europaea HOM05D007882 ORTHO05D009870 1.2e-88 329.7 155 100.0
CSS0041544 Camellia sinensis var. sinensis HOM05D007882 ORTHO05D009870 2.4e-65 252.3 155 71.6
Migut.M01110 Erythranthe guttata HOM05D007882 ORTHO05D009870 6.6e-63 244.2 156 70.5
Cc02_g13810 Coffea canephora HOM05D007882 ORTHO05D009870 1.6e-61 239.6 149 69.8
QL05p042203 Quercus lobata HOM05D007882 ORTHO05D009870 1.1e-60 236.9 152 71.1
Potri.004G048400 Populus trichocarpa HOM05D007882 ORTHO05D009870 2.0e-59 232.6 150 68.0
Haze_06385 Corylus avellana HOM05D007882 ORTHO05D009870 3.4e-59 231.9 149 68.5
Atru.chr10.1801 Acer truncatum HOM05D007882 ORTHO05D009870 4.4e-59 231.5 156 67.9
CiPaw.10G052500 Carya illinoinensis HOM05D007882 ORTHO05D009870 7.5e-59 230.7 149 69.1
Sabra04G0030400 Salix brachista HOM05D007882 ORTHO05D009870 7.5e-59 230.7 150 68.0
Manes.17G049100 Manihot esculenta HOM05D007882 ORTHO05D009870 9.9e-59 230.3 150 66.7
TWI38G0780 Tripterygium wilfordii HOM05D007882 ORTHO05D009870 9.9e-59 230.3 151 66.9
Duzib235G1325 Durio zibethinus HOM05D007882 ORTHO05D009870 2.4e-57 225.7 156 65.4
Manes.16G031800 Manihot esculenta HOM05D007882 ORTHO05D009870 4.1e-57 224.9 150 66.0
SalBow8G2967 Salvia bowleyana HOM05D007882 ORTHO05D009870 4.1e-57 224.9 153 64.1
SalBow8G3626 Salvia bowleyana HOM05D007882 ORTHO05D009870 4.1e-57 224.9 153 64.1
TAR627G1093 Trochodendron aralioides HOM05D007882 ORTHO05D009870 5.4e-57 224.6 155 67.7
CANSAT35G1953 Cannabis sativa HOM05D007882 ORTHO05D009870 9.2e-57 223.8 147 69.4
Prupe.4G052300 Prunus persica HOM05D007882 ORTHO05D009870 1.2e-56 223.4 148 66.2
Medtr2g014430 Medicago truncatula HOM05D007882 ORTHO05D009870 3.5e-56 221.9 148 68.2
Gohir.A05G159200 Gossypium hirsutum HOM05D007882 ORTHO05D009870 4.6e-56 221.5 156 64.1
Nn1g06425 Nelumbo nucifera HOM05D007882 ORTHO05D009870 4.6e-56 221.5 158 65.2
Cfa000524 Carpinus fangiana HOM05D007882 ORTHO05D009870 6.0e-56 221.1 149 65.1
TPR.G789 Trifolium pratense HOM05D007882 ORTHO05D009870 7.8e-56 220.7 148 67.6
Ciclev10017073m.g Citrus clementina HOM05D007882 ORTHO05D009870 1.3e-55 219.9 148 67.6
SGA_v2.0_scaffold22G09668 Striga asiatica HOM05D007882 ORTHO05D009870 1.3e-55 219.9 154 63.6
MD10G1289500 Malus domestica HOM05D007882 ORTHO05D009870 3.9e-55 218.4 148 68.2
COL.COLO4_31420 Corchorus olitorius HOM05D007882 ORTHO05D009870 5.1e-55 218.0 154 64.3
Gorai.009G166900 Gossypium raimondii HOM05D007882 ORTHO05D009870 5.1e-55 218.0 156 63.5
Nitab4.5_0004359g0010 Nicotiana tabacum HOM05D007882 ORTHO05D009870 4.3e-54 214.9 155 60.6
Rhsim02G0134400 Rhododendron simsii HOM05D007882 ORTHO05D009870 1.6e-53 213.0 148 67.6
PGR004G2459 Punica granatum HOM05D007882 ORTHO05D009870 3.6e-53 211.8 154 63.6
Thecc.06G181400 Theobroma cacao HOM05D007882 ORTHO05D009870 4.7e-53 211.5 156 61.5
Aa31LG9G13760 Aethionema arabicum HOM05D007882 ORTHO05D009870 6.2e-53 211.1 150 63.3
ClCG00G004760 Citrullus lanatus HOM05D007882 ORTHO05D009870 6.2e-53 211.1 154 63.0
ClCG01G023240 Citrullus lanatus HOM05D007882 ORTHO05D009870 6.2e-53 211.1 154 63.0
Psat1g202760 Pisum sativum HOM05D007882 ORTHO05D009870 1.8e-52 209.5 148 63.5
Lj6g0021640 Lotus japonicus HOM05D007882 ORTHO05D009870 2.4e-52 209.1 148 64.2
A04p26080 Brassica napus HOM05D007882 ORTHO05D009870 3.1e-52 208.8 150 65.3
BraA04t18110Z Brassica rapa HOM05D007882 ORTHO05D009870 3.1e-52 208.8 150 65.3
C04p63420 Brassica napus HOM05D007882 ORTHO05D009870 5.2e-52 208.0 150 64.7
BolC4t27817H Brassica oleracea HOM05D007882 ORTHO05D009870 5.2e-52 208.0 150 64.7
Lalb_Chr18g0059401 Lupinus albus HOM05D007882 ORTHO05D009870 6.8e-52 207.6 150 64.0
Sp4g16270 Schrenkiella parvula HOM05D007882 ORTHO05D009870 8.9e-52 207.2 150 64.0
CAN.G529.52 Capsicum annuum HOM05D007882 ORTHO05D009870 2.0e-51 206.1 153 58.2
arahy.Tifrunner.gnm1.ann1.CPZJ30 Arachis hypogaea HOM05D007882 ORTHO05D009870 2.6e-51 205.7 149 63.1
RcHm_v2.0_Chr5g0009121 Rosa chinensis HOM05D007882 ORTHO05D009870 2.6e-51 205.7 149 61.7
Eucgr.D00598 Eucalyptus grandis HOM05D007882 ORTHO05D009870 5.8e-51 204.5 148 64.2
Gohir.D05G161900 Gossypium hirsutum HOM05D007882 ORTHO05D009870 5.8e-51 204.5 150 62.0
FvH4_3g08670 Fragaria vesca HOM05D007882 ORTHO05D009870 7.6e-51 204.1 149 61.7
FAN21G3311 Fragaria x ananassa HOM05D001455 ORTHO05D001587 7.6e-51 204.1 149 61.7
MELO3C007262.2 Cucumis melo HOM05D007882 ORTHO05D009870 9.9e-51 203.8 149 62.4
FAN16G0532 Fragaria x ananassa HOM05D007882 ORTHO05D009870 2.9e-50 202.2 149 60.4
FAN11G2645 Fragaria x ananassa HOM05D007882 ORTHO05D009870 6.4e-50 201.1 149 61.1
CARHR128020 Cardamine hirsuta HOM05D007882 ORTHO05D009870 8.4e-50 200.7 150 60.7
Thhalv10017644m.g Eutrema salsugineum HOM05D007882 ORTHO05D009870 8.4e-50 200.7 150 60.7
Sed0022369 Sechium edule HOM05D007882 ORTHO05D009870 1.4e-49 199.9 150 64.0
Aqoxy4G00631 Aquilegia oxysepala HOM05D007882 ORTHO05D009870 2.4e-49 199.1 152 61.2
Glyma.13G235900 Glycine max HOM05D007882 ORTHO05D009870 1.2e-48 196.8 150 62.7
THA.LOC104820567 Tarenaya hassleriana HOM05D007882 ORTHO05D009870 3.5e-48 195.3 150 60.7
unitig_22.g6219 Utricularia gibba HOM05D007882 ORTHO05D009870 3.5e-48 195.3 152 56.6
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 4.6e-48 194.9 117 72.6
HanXRQChr01g0014401 Helianthus annuus HOM05D007882 ORTHO05D009870 5.1e-47 191.4 154 59.7
PSO210G4689 Papaver somniferum HOM05D007882 ORTHO05D009870 6.6e-47 191.0 156 59.6
AL4G29660 Arabidopsis lyrata HOM05D007882 ORTHO05D009870 1.5e-46 189.9 150 58.0
PGSC0003DMG400031764 Solanum tuberosum HOM05D007882 ORTHO05D009870 1.5e-46 189.9 148 56.8
DCAR_028056 Daucus carota HOM05D007882 ORTHO05D009870 2.5e-46 189.1 152 57.9
Carub.0004s1556 Capsella rubella HOM05D007882 ORTHO05D009870 4.3e-46 188.3 150 58.7
Phvul.006G182500 Phaseolus vulgaris HOM05D007882 ORTHO05D009870 2.8e-45 185.7 150 58.0
Solyc02g077700.1 Solanum lycopersicum HOM05D007882 ORTHO05D009870 4.8e-45 184.9 148 55.4
PSO210G1466 Papaver somniferum HOM05D007882 ORTHO05D009870 8.1e-45 184.1 156 57.7
AT2G33855 Arabidopsis thaliana HOM05D007882 ORTHO05D009870 1.4e-44 183.3 150 57.3
ATR0789G148 Amborella trichopoda HOM05D007882 ORTHO05D009870 1.7e-42 176.4 149 56.4
CsaV3_6G050400 Cucumis sativus L. HOM05D007882 ORTHO05D009870 3.8e-42 175.3 127 63.8
MBI04_g06226_MAGBIO Magnolia biondii HOM05D007882 ORTHO05D009870 2.5e-38 162.5 158 50.6
Nitab4.5_0001955g0180 Nicotiana tabacum HOM05D007882 ORTHO05D009870 3.3e-38 162.2 112 62.5
Ah.14g089690 Amaranthus hybridus HOM05D007882 ORTHO05D009870 7.3e-38 161.0 120 61.7
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 1.4e-36 156.8 125 59.2
HPP92_022798 Vanilla planifolia HOM05D007882 ORTHO05D009870 6.7e-31 137.9 144 48.6
Nn1g04229 Nelumbo nucifera HOM05D007882 ORTHO05D009870 1.5e-27 126.7 100 61.0
QL06p028733 Quercus lobata HOM05D007882 ORTHO05D009870 1.2e-24 117.1 98 61.2
Os04g0475300 Oryza sativa ssp. japonica HOM05D007882 ORTHO05D009870 6.2e-21 104.8 155 40.6
Zm00001eb079820 Zea mays HOM05D007882 ORTHO05D009870 9.0e-20 100.9 150 40.7
BcaC02g07777 Brassica carinata HOM05D007882 ORTHO05D009870 6.1e-16 88.2 111 45.0
Cpa.g.sc27.7 Carica papaya HOM05D007882 ORTHO05D009870 6.1e-16 88.2 64 67.2
Sc17g0005950 Simmondsia chinensis HOM05D007447 ORTHO05D009372 3.3e-14 82.4 63 60.3


User provided reference genes

Program Settings