Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu012106.1 Olea europaea HOM05D000434 ORTHO05D004273 1.0e-196 689.9 342 100.0
Oeu028992.1 Olea europaea HOM05D000434 ORTHO05D004273 1.4e-153 546.6 311 89.1
Migut.H00002 Erythranthe guttata HOM05D000434 ORTHO05D004273 4.2e-118 428.7 311 69.1
SalBow1G4855 Salvia bowleyana HOM05D000434 ORTHO05D004273 2.1e-117 426.4 311 68.8
Cc02_g00030 Coffea canephora HOM05D000434 ORTHO05D004273 2.6e-104 382.9 313 66.1
Dinv17235 Davidia involucrata HOM05D000434 ORTHO05D004273 1.2e-101 374.0 319 64.6
CAN.G732.30 Capsicum annuum HOM05D000434 ORTHO05D004273 2.1e-101 373.2 313 64.5
Dinv07434 Davidia involucrata HOM05D000434 ORTHO05D004273 1.3e-100 370.5 319 63.9
GSVIVG01024260001 Vitis vinifera HOM05D000434 ORTHO05D004273 5.1e-100 368.6 307 62.9
Actinidia33805 Actinidia chinensis HOM05D000434 ORTHO05D004273 2.2e-98 363.2 318 62.3
MD01G1239700 Malus domestica HOM05D000434 ORTHO05D004273 4.8e-98 362.1 317 59.9
Prupe.2G329600 Prunus persica HOM05D000434 ORTHO05D004273 6.3e-98 361.7 318 60.7
RcHm_v2.0_Chr1g0384621 Rosa chinensis HOM05D000434 ORTHO05D004273 1.4e-97 360.5 317 60.3
MD07G1311600 Malus domestica HOM05D000434 ORTHO05D004273 2.6e-96 356.3 315 59.7
Sopen03g028110 Solanum pennellii HOM05D000434 ORTHO05D004273 4.5e-96 355.5 315 60.0
Cpa.g.c34510 Carica papaya HOM05D000434 ORTHO05D004273 2.2e-95 353.2 315 60.0
Solyc03g097350.4 Solanum lycopersicum HOM05D000434 ORTHO05D004273 2.9e-95 352.8 315 59.7
Manes.09G131000 Manihot esculenta HOM05D000434 ORTHO05D004273 2.7e-93 346.3 315 58.1
Duzib177G0206 Durio zibethinus HOM05D000434 ORTHO05D004273 3.6e-93 345.9 316 58.9
Gorai.007G247600 Gossypium raimondii HOM05D000434 ORTHO05D004273 4.6e-93 345.5 317 58.0
Thecc.05G227400 Theobroma cacao HOM05D000434 ORTHO05D004273 4.6e-93 345.5 316 57.6
CiPaw.06G037700 Carya illinoinensis HOM05D000434 ORTHO05D004273 7.9e-93 344.7 309 59.2
Gohir.D11G234900 Gossypium hirsutum HOM05D000434 ORTHO05D004273 1.8e-92 343.6 317 58.0
Peaxi162Scf00516g00432 Petunia axillaris HOM05D000434 ORTHO05D004273 3.0e-92 342.8 313 60.4
Nitab4.5_0000021g0920 Nicotiana tabacum HOM05D000434 ORTHO05D004273 5.1e-92 342.0 312 60.3
COL.COLO4_08409 Corchorus olitorius HOM05D000434 ORTHO05D004273 1.1e-91 340.9 314 57.0
FAN03G1317 Fragaria x ananassa HOM05D000434 ORTHO05D004273 3.3e-91 339.3 317 57.4
CSS0041140 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D004273 7.4e-91 338.2 319 61.1
vmacro06357 Vaccinium macrocarpon HOM05D000434 ORTHO05D004273 2.8e-90 336.3 297 62.0
FvH4_7g34270 Fragaria vesca HOM05D000434 ORTHO05D004273 4.8e-90 335.5 317 57.1
Gohir.A11G221500 Gossypium hirsutum HOM05D001644 ORTHO05D004273 4.8e-90 335.5 317 56.8
Haze_00345 Corylus avellana HOM05D000434 ORTHO05D004273 6.9e-89 331.6 316 58.2
Gorai.013G185200 Gossypium raimondii HOM05D000434 ORTHO05D004273 6.9e-89 331.6 295 60.0
Manes.08G158900 Manihot esculenta HOM05D000434 ORTHO05D004273 9.1e-89 331.3 317 56.2
Gohir.D13G163000 Gossypium hirsutum HOM05D000434 ORTHO05D004273 1.2e-88 330.9 295 60.0
CiPaw.05G210600 Carya illinoinensis HOM05D000434 ORTHO05D004273 2.6e-88 329.7 319 57.7
Cfa016111 Carpinus fangiana HOM05D004970 ORTHO05D005665 4.5e-88 328.9 316 57.6
TAR629G3430 Trochodendron aralioides HOM05D000434 ORTHO05D004273 4.5e-88 328.9 304 60.2
Nitab4.5_0005545g0040 Nicotiana tabacum HOM05D000434 ORTHO05D004273 7.7e-88 328.2 313 60.1
Gohir.A13G158300 Gossypium hirsutum HOM05D000434 ORTHO05D004273 1.3e-87 327.4 295 59.7
Aqoxy6G02174 Aquilegia oxysepala HOM05D000434 ORTHO05D004273 6.5e-87 325.1 318 56.3
TAR636G0662 Trochodendron aralioides HOM05D000434 ORTHO05D004273 1.4e-86 323.9 304 59.2
DCAR_020436 Daucus carota HOM05D000434 ORTHO05D004273 2.5e-86 323.2 313 56.5
Hma1.2p1_0419F.1_g149600 Hydrangea macrophylla HOM05D000434 ORTHO05D004273 2.5e-86 323.2 318 58.8
Rhsim03G0225600 Rhododendron simsii HOM05D000434 ORTHO05D004273 9.4e-86 321.2 297 59.9
TWI34G0496 Tripterygium wilfordii HOM05D000434 ORTHO05D004273 9.4e-86 321.2 311 57.6
unitig_748.g6994 Utricularia gibba HOM05D000434 ORTHO05D004273 9.4e-86 321.2 309 53.7
Nn1g09320 Nelumbo nucifera HOM05D000434 ORTHO05D004273 1.2e-85 320.9 289 60.6
TWI60G1125 Tripterygium wilfordii HOM05D000434 ORTHO05D004273 1.6e-85 320.5 323 55.4
arahy.Tifrunner.gnm1.ann1.Y5NR52 Arachis hypogaea HOM05D000434 ORTHO05D004273 3.6e-85 319.3 295 59.0
Sabra13G0064800 Salix brachista HOM05D000434 ORTHO05D004273 3.6e-85 319.3 318 56.9
arahy.Tifrunner.gnm1.ann1.R5L11J Arachis hypogaea HOM05D000434 ORTHO05D004273 6.1e-85 318.5 295 59.0
ClCG01G005430 Citrullus lanatus HOM05D000434 ORTHO05D004273 7.9e-85 318.2 302 58.3
Lalb_Chr09g0334671 Lupinus albus HOM05D000434 ORTHO05D004273 1.0e-84 317.8 314 54.5
Medtr8g070930 Medicago truncatula HOM05D000434 ORTHO05D004273 1.4e-84 317.4 290 57.2
Ciclev10030644m.g Citrus clementina HOM05D000434 ORTHO05D004273 2.3e-84 316.6 294 57.5
Potri.019G043400 Populus trichocarpa HOM05D000434 ORTHO05D004273 2.3e-84 316.6 318 56.0
MELO3C005386.2 Cucumis melo HOM05D000434 ORTHO05D004273 5.1e-84 315.5 302 58.3
Lj3C883G2 Lonicera japonica HOM05D000434 ORTHO05D004273 2.0e-83 313.5 316 60.8
Potri.013G075300 Populus trichocarpa HOM05D000434 ORTHO05D004273 2.0e-83 313.5 318 56.6
Lsat_1_v5_gn_9_47961 Lactuca sativa HOM05D000434 ORTHO05D004273 2.6e-83 313.2 290 63.1
Atru.chr13.64 Acer truncatum HOM05D000434 ORTHO05D004273 5.7e-83 312.0 318 56.0
CsaV3_5G005670 Cucumis sativus L. HOM05D000434 ORTHO05D004273 5.7e-83 312.0 302 57.9
Sabra19G0054100 Salix brachista HOM05D000434 ORTHO05D004273 9.7e-83 311.2 283 59.4
Duzib128G0661 Durio zibethinus HOM05D000434 ORTHO05D004273 3.7e-82 309.3 323 54.5
Sed0016658 Sechium edule HOM05D000434 ORTHO05D004273 3.7e-82 309.3 303 57.4
Atru.chr12.1812 Acer truncatum HOM05D000434 ORTHO05D004273 1.4e-81 307.4 318 56.0
Lj4g0020871 Lotus japonicus HOM05D000434 ORTHO05D004273 1.4e-81 307.4 311 54.3
ECA232G4531 Erigeron canadensis HOM05D000434 ORTHO05D004273 2.4e-81 306.6 289 58.8
Sed0010122 Sechium edule HOM05D000434 ORTHO05D004273 9.1e-81 304.7 302 57.0
SGA_v2.0_scaffold18G08208 Striga asiatica HOM05D000434 ORTHO05D004273 1.2e-80 304.3 319 54.2
CANSAT21G2065 Cannabis sativa HOM05D000434 ORTHO05D004273 2.2e-79 300.1 290 55.9
Glyma.08G266300 Glycine max HOM05D000434 ORTHO05D004273 5.0e-79 298.9 293 55.3
THA.LOC104805727 Tarenaya hassleriana HOM05D000434 ORTHO05D004273 1.9e-78 297.0 300 57.0
Psat4g111280 Pisum sativum HOM05D000434 ORTHO05D004273 2.5e-78 296.6 296 55.1
Glyma.16G101500 Glycine max HOM05D000434 ORTHO05D004273 5.5e-78 295.4 293 54.9
Aa31LG9G17860 Aethionema arabicum HOM05D000434 ORTHO05D004273 7.2e-78 295.0 294 56.1
Phvul.003G275500 Phaseolus vulgaris HOM05D000434 ORTHO05D004273 1.6e-77 293.9 287 55.1
PGR142G0113 Punica granatum HOM05D000434 ORTHO05D004273 3.6e-77 292.7 300 54.3
PSO063G7071 Papaver somniferum HOM05D000434 ORTHO05D004273 4.7e-77 292.4 319 53.6
Sp7g06110 Schrenkiella parvula HOM05D000434 ORTHO05D004273 4.7e-77 292.4 306 53.9
TPR.G6121 Trifolium pratense HOM05D000434 ORTHO05D004273 8.0e-77 291.6 281 55.5
Thhalv10003604m.g Eutrema salsugineum HOM05D000434 ORTHO05D004273 1.0e-76 291.2 300 55.0
PSO782G3487 Papaver somniferum HOM05D000434 ORTHO05D004273 1.0e-76 291.2 319 53.3
THA.LOC104821671 Tarenaya hassleriana HOM05D000434 ORTHO05D004273 1.0e-76 291.2 311 55.0
Nn3g19154 Nelumbo nucifera HOM05D000434 ORTHO05D004273 2.3e-76 290.0 318 53.1
HanXRQChr16g0512161 Helianthus annuus HOM05D000434 ORTHO05D004273 3.9e-76 289.3 290 58.3
EL10Ac3g05039 Beta vulgaris HOM05D000434 ORTHO05D004273 6.7e-76 288.5 310 53.2
AT5G35980 Arabidopsis thaliana HOM05D000434 ORTHO05D004273 2.0e-75 287.0 297 55.6
Lalb_Chr05g0228931 Lupinus albus HOM05D000434 ORTHO05D004273 2.8e-74 283.1 299 54.2
VMungo0251G3292 Vigna mungo HOM05D000434 ORTHO05D004273 4.8e-74 282.3 291 52.2
AUR62002097 Chenopodium quinoa HOM05D000434 ORTHO05D004273 1.4e-73 280.8 287 55.7
AUR62028215 Chenopodium quinoa HOM05D000434 ORTHO05D004273 1.8e-73 280.4 300 54.7
BraA05t20550Z Brassica rapa HOM05D000434 ORTHO05D004273 1.0e-71 274.6 296 54.7
Carub.0007s3176 Capsella rubella HOM05D000434 ORTHO05D004273 1.3e-71 274.2 294 53.4
Gohir.A08G221628 Gossypium hirsutum HOM05D000434 ORTHO05D004273 1.7e-71 273.9 316 50.6
BcaB06g27005 Brassica carinata HOM05D000434 ORTHO05D004273 5.0e-71 272.3 240 59.2
A05p16450 Brassica napus HOM05D000434 ORTHO05D004273 5.0e-71 272.3 305 53.4
FAN10G0514 Fragaria x ananassa HOM05D000434 ORTHO05D004273 1.1e-70 271.2 318 50.0
Gohir.D08G239652 Gossypium hirsutum HOM05D000434 ORTHO05D004273 1.5e-70 270.8 317 50.5
BcaC08g44318 Brassica carinata HOM05D000434 ORTHO05D004273 1.9e-70 270.4 297 54.5
C06p17410 Brassica napus HOM05D000434 ORTHO05D004273 1.9e-70 270.4 297 54.5
BolC6t36936H Brassica oleracea HOM05D000434 ORTHO05D004273 1.9e-70 270.4 297 54.5
Eucgr.K00069 Eucalyptus grandis HOM05D000434 ORTHO05D004273 3.2e-70 269.6 294 52.7
unitig_0.g1632 Utricularia gibba HOM05D000434 ORTHO05D004273 4.2e-70 269.2 258 54.7
Gorai.004G254900 Gossypium raimondii HOM05D000434 ORTHO05D004273 1.6e-69 267.3 317 50.5
BcaC02g09507 Brassica carinata HOM05D000434 ORTHO05D004273 4.7e-69 265.8 258 56.2
C04p43540 Brassica napus HOM05D000434 ORTHO05D004273 4.7e-69 265.8 258 56.2
BolC4t25934H Brassica oleracea HOM05D000434 ORTHO05D004273 4.7e-69 265.8 258 56.2
A04p10070 Brassica napus HOM05D000434 ORTHO05D004273 8.0e-69 265.0 242 59.1
BraA04t16669Z Brassica rapa HOM05D000434 ORTHO05D004273 1.4e-68 264.2 279 53.8
BcaB02g08046 Brassica carinata HOM05D000434 ORTHO05D004273 5.2e-68 262.3 311 52.4
Hund09813 Selenicereus undatus HOM05D000434 ORTHO05D004273 1.8e-65 253.8 335 47.5
Sc13g0011040 Simmondsia chinensis HOM05D000434 ORTHO05D004273 2.4e-65 253.4 313 48.2
AL7G44910 Arabidopsis lyrata HOM05D000434 ORTHO05D004273 4.1e-65 252.7 297 51.5
Aa31LG2G2100 Aethionema arabicum HOM05D000434 ORTHO05D004273 1.7e-63 247.3 337 45.7
CARHR216670 Cardamine hirsuta HOM05D000434 ORTHO05D004273 5.0e-63 245.7 295 52.9
Ca_26089_v3 Cicer arietinum L. HOM05D000434 ORTHO05D004273 5.0e-63 245.7 275 51.3
PGSC0003DMG400026492 Solanum tuberosum HOM05D000434 ORTHO05D004273 5.5e-62 242.3 242 57.4
Ah.04g156120 Amaranthus hybridus HOM05D000434 ORTHO05D004273 1.3e-58 231.1 276 50.4
Os02g0702500 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D004273 9.1e-57 224.9 287 46.0
HPP92_027561 Vanilla planifolia HOM05D000434 ORTHO05D004273 2.2e-50 203.8 298 44.3
Zm00001eb251910 Zea mays HOM05D000434 ORTHO05D004273 6.3e-50 202.2 285 45.6
SEGI_11197 Sequoiadendron giganteum HOM05D000434 ORTHO05D004273 5.4e-49 199.1 319 43.6
HPP92_014380 Vanilla planifolia HOM05D000434 ORTHO05D004273 1.2e-48 198.0 280 44.6
CDE02G1949 Ceratophyllum demersum HOM05D000434 ORTHO05D004273 2.0e-48 197.2 294 44.6
CDE11G0770 Ceratophyllum demersum HOM05D000434 ORTHO05D004273 5.9e-48 195.7 309 43.4
ATR0568G029 Amborella trichopoda HOM05D000434 ORTHO05D004273 8.6e-47 191.8 294 44.6
Zm00001eb071720 Zea mays HOM05D000434 ORTHO05D004273 5.6e-46 189.1 323 39.3
Os04g0602800 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D004273 4.4e-43 179.5 301 39.2
Zm00001eb430360 Zea mays HOM05D000434 ORTHO05D004273 1.1e-36 158.3 324 35.8
Nn8g38573 Nelumbo nucifera HOM05D000434 ORTHO05D004273 2.6e-35 153.7 230 44.3
Pp3c18_14490 Physcomitrium patens HOM05D000434 ORTHO05D004273 2.1e-24 117.5 364 32.7
Mapoly0032s0168 Marchantia polymorpha HOM05D000434 ORTHO05D004273 4.7e-21 106.3 175 41.1
AagrBONN_evm.TU.Sc2ySwM_362.1327 Anthoceros agrestis HOM05D000434 ORTHO05D004273 1.8e-20 104.4 255 36.9
Pp3c21_14580 Physcomitrium patens HOM05D000434 ORTHO05D004273 2.6e-19 100.5 358 30.7
SEGI_24558 Sequoiadendron giganteum HOM05D000434 ORTHO05D004273 2.6e-19 100.5 305 32.5
Pp3c18_12340 Physcomitrium patens HOM05D000434 ORTHO05D004273 1.9e-17 94.4 351 30.5
Pp3c21_19420 Physcomitrium patens HOM05D000434 ORTHO05D004273 1.6e-13 81.3 366 27.9
Pp3c20_10410 Physcomitrium patens HOM05D000434 ORTHO05D004273 6.2e-13 79.3 350 27.4
SMO200G0029 Selaginella moellendorffii HOM05D000434 ORTHO05D004273 8.1e-13 79.0 52 61.5
CBR_g30605 Chara braunii HOM05D001644 ORTHO05D004273 1.8e-12 77.8 349 28.7
RcHm_v2.0_Chr4g0419371 Rosa chinensis HOM05D006584 ORTHO05D341624 1.9e-06 57.8 28 78.6
Actinidia04555 Actinidia chinensis HOM05D000434 ORTHO05D004273 3.3e-06 57.0 35 68.6


User provided reference genes

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