Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011980.1 Olea europaea HOM05D005432 ORTHO05D004599 1.2e-79 300.1 181 100.0
SalBow5G2133 Salvia bowleyana HOM05D005432 ORTHO05D004599 1.9e-29 133.3 163 49.7
Oeu021446.1 Olea europaea HOM05D005432 ORTHO05D004599 3.5e-23 112.5 154 50.0
TAR628G1364 Trochodendron aralioides HOM05D005432 ORTHO05D004599 2.3e-22 109.8 151 48.3
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 3.9e-22 109.0 174 42.5
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 3.9e-22 109.0 165 43.0
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 8.6e-22 107.8 165 47.3
QL06p039087 Quercus lobata HOM05D005432 ORTHO05D004599 3.3e-21 105.9 169 43.8
Actinidia11967 Actinidia chinensis HOM05D005432 ORTHO05D004599 2.8e-20 102.8 165 43.6
TAR376G0425 Trochodendron aralioides HOM05D005432 ORTHO05D004599 2.8e-20 102.8 190 44.7
Sabra14G0006100 Salix brachista HOM05D005432 ORTHO05D004599 3.6e-20 102.4 175 39.4
Migut.L00424 Erythranthe guttata HOM05D005432 ORTHO05D004599 6.2e-20 101.7 161 43.5
SGA_v2.0_scaffold15G07481 Striga asiatica HOM05D005432 ORTHO05D004599 6.2e-20 101.7 166 40.4
Solyc09g008760.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.1e-19 100.9 237 35.9
Nitab4.5_0008385g0020 Nicotiana tabacum HOM05D005432 ORTHO05D004599 3.1e-19 99.4 197 39.1
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 5.2e-19 98.6 175 40.6
PGSC0003DMG400012977 Solanum tuberosum HOM05D005432 ORTHO05D004599 8.9e-19 97.8 206 37.4
Nitab4.5_0000680g0130 Nicotiana tabacum HOM05D005432 ORTHO05D004599 3.4e-18 95.9 197 36.0
TWI77G0559 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 1.3e-17 94.0 164 39.0
DCAR_010807 Daucus carota HOM05D005432 ORTHO05D004599 1.7e-17 93.6 156 41.0
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.7e-17 93.6 164 42.1
Nitab4.5_0008385g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 6.4e-17 91.7 209 35.9
Cc07_g07280 Coffea canephora HOM05D005432 ORTHO05D004599 8.3e-17 91.3 207 42.0
Peaxi162Scf00500g00034 Petunia axillaris HOM05D005432 ORTHO05D004599 1.1e-16 90.9 231 41.1
Manes.12G116300 Manihot esculenta HOM05D005432 ORTHO05D004599 1.9e-16 90.1 178 38.2
Solyc09g008750.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 3.2e-16 89.4 212 35.8
Dinv23035 Davidia involucrata HOM05D005432 ORTHO05D004599 4.1e-16 89.0 175 44.6
Ciclev10026545m.g Citrus clementina HOM05D005432 ORTHO05D004599 7.1e-16 88.2 176 38.6
Manes.13G109800 Manihot esculenta HOM05D005432 ORTHO05D004599 2.7e-15 86.3 157 41.4
Nitab4.5_0000680g0150 Nicotiana tabacum HOM05D005432 ORTHO05D004599 4.6e-15 85.5 161 42.2
MBI16_g39101_MAGBIO Magnolia biondii HOM05D005432 ORTHO05D004599 6.0e-15 85.1 158 40.5
Hma1.2p1_0424F.1_g150570 Hydrangea macrophylla HOM05D005432 ORTHO05D004599 7.8e-15 84.7 158 38.6
Rhsim10G0095100 Rhododendron simsii HOM05D005432 ORTHO05D004599 1.0e-14 84.3 133 44.4
Thecc.01G075000 Theobroma cacao HOM05D005432 ORTHO05D004599 1.3e-14 84.0 169 39.6
Rhsim10G0095000 Rhododendron simsii HOM05D005432 ORTHO05D004599 1.7e-14 83.6 138 41.3
Migut.H00333 Erythranthe guttata HOM05D005432 ORTHO05D004599 2.3e-14 83.2 138 43.5
PGSC0003DMG400002732 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.3e-14 83.2 202 33.7
TWI74G0597 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 8.6e-14 81.3 160 36.9
CAN.G1830.1 Capsicum annuum HOM05D005432 ORTHO05D004599 1.9e-13 80.1 146 39.7
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 4.3e-13 79.0 177 37.3
Lsat_1_v5_gn_4_160141 Lactuca sativa HOM05D005432 ORTHO05D004599 5.6e-13 78.6 200 33.0
Gohir.D12G076200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 2.1e-12 76.6 174 36.8
Duzib147G0737 Durio zibethinus HOM05D005432 ORTHO05D004599 2.8e-12 76.3 156 38.5
Gorai.007G225500 Gossypium raimondii HOM05D005432 ORTHO05D004599 3.6e-12 75.9 155 36.8
PGR102G0812 Punica granatum HOM05D005432 ORTHO05D004599 3.6e-12 75.9 144 43.8
PGSC0003DMG400012978 Solanum tuberosum HOM05D005432 ORTHO05D004599 3.6e-12 75.9 168 37.5
Solyc09g008740.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 4.7e-12 75.5 166 37.3
FvH4_1g18020 Fragaria vesca HOM05D005432 ORTHO05D004599 8.1e-12 74.7 157 38.9
FAN19G1119 Fragaria x ananassa HOM05D005432 ORTHO05D004599 8.1e-12 74.7 157 38.9
Gohir.A12G078000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 8.1e-12 74.7 174 36.8
Rhsim08G0092400 Rhododendron simsii HOM05D005432 ORTHO05D004599 8.1e-12 74.7 153 37.3
Cfa004151 Carpinus fangiana HOM05D005432 ORTHO05D004599 1.8e-11 73.6 175 39.4
Sopen09g003530 Solanum pennellii HOM05D005432 ORTHO05D004599 1.8e-11 73.6 170 35.3
Sopen09g003550 Solanum pennellii HOM05D005432 ORTHO05D004599 1.8e-11 73.6 174 34.5
CAN.G1830.3 Capsicum annuum HOM05D005432 ORTHO05D004599 2.4e-11 73.2 167 36.5
Migut.L00423 Erythranthe guttata HOM05D005432 ORTHO05D004599 2.4e-11 73.2 142 39.4
FAN23G2070 Fragaria x ananassa HOM05D005432 ORTHO05D004599 2.4e-11 73.2 156 38.5
FAN26G1008 Fragaria x ananassa HOM05D005432 ORTHO05D004599 2.4e-11 73.2 156 38.5
Gohir.D11G210200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 2.4e-11 73.2 157 36.9
Gorai.008G084600 Gossypium raimondii HOM05D005432 ORTHO05D004599 2.4e-11 73.2 174 35.6
Atru.chr3.1044 Acer truncatum HOM05D005432 ORTHO05D004599 4.0e-11 72.4 155 38.1
Gohir.A11G213000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 4.0e-11 72.4 153 35.3
RcHm_v2.0_Chr2g0108511 Rosa chinensis HOM05D005432 ORTHO05D004599 6.8e-11 71.6 158 37.3
PGSC0003DMG400003320 Solanum tuberosum HOM05D005432 ORTHO05D004599 6.8e-11 71.6 188 35.1
Sopen09g003540 Solanum pennellii HOM05D005432 ORTHO05D004599 8.9e-11 71.2 151 39.7
ECA232G3846 Erigeron canadensis HOM05D005432 ORTHO05D004599 2.6e-10 69.7 182 34.6
Peaxi162Scf00449g00414 Petunia axillaris HOM05D005432 ORTHO05D004599 3.4e-10 69.3 180 37.8
CiPaw.01G002700 Carya illinoinensis HOM05D005432 ORTHO05D004599 5.8e-10 68.6 144 38.2
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 7.6e-10 68.2 190 34.7
COL.COLO4_11602 Corchorus olitorius HOM05D005432 ORTHO05D004599 1.3e-09 67.4 130 37.7
Duzib264G0647 Durio zibethinus HOM05D005432 ORTHO05D004599 1.3e-09 67.4 170 34.7
CANSAT01G2351 Cannabis sativa HOM05D005432 ORTHO05D004599 1.7e-09 67.0 193 32.1
Lsat_1_v5_gn_4_160361 Lactuca sativa HOM05D005432 ORTHO05D004599 2.9e-09 66.2 174 33.3
Sopen02g014700 Solanum pennellii HOM05D005432 ORTHO05D004599 4.9e-09 65.5 177 33.9
ECA232G0649 Erigeron canadensis HOM05D005432 ORTHO05D004599 6.4e-09 65.1 175 33.7
CAN.G775.5 Capsicum annuum HOM05D005432 ORTHO05D004599 1.9e-08 63.5 158 35.4
Gohir.D11G052400 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.9e-08 63.5 153 36.6
ClCG01G017720 Citrullus lanatus HOM05D005432 ORTHO05D004599 2.4e-08 63.2 112 37.5
CiPaw.02G001400 Carya illinoinensis HOM05D005432 ORTHO05D004599 3.2e-08 62.8 146 37.7
ECA232G3481 Erigeron canadensis HOM05D005432 ORTHO05D004599 3.2e-08 62.8 168 32.7
Gorai.007G056800 Gossypium raimondii HOM05D005432 ORTHO05D004599 3.2e-08 62.8 153 36.6
Hma1.2p1_1085F.1_g255410 Hydrangea macrophylla HOM05D005432 ORTHO05D004599 7.1e-08 61.6 184 37.5
Gohir.A11G048800 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.6e-07 60.5 150 36.0
Nn5g30641 Nelumbo nucifera HOM05D005432 ORTHO05D004599 2.1e-07 60.1 155 36.8
Solyc02g064570.2 Solanum lycopersicum HOM05D005432 ORTHO05D004599 2.1e-07 60.1 181 32.0
CAN.G1830.2 Capsicum annuum HOM05D005432 ORTHO05D004599 4.6e-07 58.9 267 30.3
CsaV3_6G044250 Cucumis sativus L. HOM05D005432 ORTHO05D004599 4.6e-07 58.9 118 37.3
Eucgr.H02317 Eucalyptus grandis HOM05D005432 ORTHO05D004599 4.6e-07 58.9 151 33.8
CDE04G1981 Ceratophyllum demersum HOM05D005432 ORTHO05D004599 6.0e-07 58.5 124 35.5
MELO3C007650.2 Cucumis melo HOM05D005432 ORTHO05D004599 6.0e-07 58.5 118 37.3
Prupe.6G218300 Prunus persica HOM05D005432 ORTHO05D004599 1.3e-06 57.4 162 35.8
Haze_15264 Corylus avellana HOM05D005432 ORTHO05D004599 1.7e-06 57.0 163 33.1
Lsat_1_v5_gn_4_160241 Lactuca sativa HOM05D005432 ORTHO05D004599 2.3e-06 56.6 212 33.5
Prupe.6G218200 Prunus persica HOM05D005432 ORTHO05D004599 3.0e-06 56.2 157 34.4


User provided reference genes

Program Settings