Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011949.1 Olea europaea HOM05D005242 ORTHO05D006778 7.9e-158 560.5 293 100.0
Cc10_g14420 Coffea canephora HOM05D005242 ORTHO05D006778 4.0e-61 239.2 304 47.4
CAN.G268.26 Capsicum annuum HOM05D005242 ORTHO05D006778 3.2e-58 229.6 324 43.8
SGA_v2.0_scaffold19G08682 Striga asiatica HOM05D001302 ORTHO05D001107 1.1e-55 221.1 291 46.4
SalBow6G1825 Salvia bowleyana HOM05D005242 ORTHO05D006778 1.9e-55 220.3 370 41.6
Nitab4.5_0001062g0060 Nicotiana tabacum HOM05D005242 ORTHO05D006778 6.2e-54 215.3 338 43.2
Peaxi162Scf00599g00049 Petunia axillaris HOM05D005242 ORTHO05D006778 1.1e-53 214.5 324 45.1
Sopen04g027460 Solanum pennellii HOM05D005242 ORTHO05D006778 5.3e-53 212.2 311 42.4
Nitab4.5_0010749g0010 Nicotiana tabacum HOM05D005242 ORTHO05D006778 1.7e-51 207.2 335 42.1
PGSC0003DMG400024099 Solanum tuberosum HOM05D005242 ORTHO05D006778 1.1e-50 204.5 302 44.0
Solyc04g071490.3 Solanum lycopersicum HOM05D005242 ORTHO05D006778 1.3e-48 197.6 339 39.2
Dinv25870 Davidia involucrata HOM05D005242 ORTHO05D006778 1.7e-48 197.2 365 36.7
DCAR_001139 Daucus carota HOM05D005242 ORTHO05D006778 1.1e-47 194.5 292 42.1
Peaxi162Scf01294g00121 Petunia axillaris HOM05D005242 ORTHO05D006778 3.3e-47 193.0 319 42.3
CANSAT25G1562 Cannabis sativa HOM05D005242 ORTHO05D006778 1.6e-46 190.7 323 41.2
PGR042G2442 Punica granatum HOM05D005242 ORTHO05D006778 1.5e-44 184.1 306 39.9
Actinidia17789 Actinidia chinensis HOM05D005242 ORTHO05D006778 2.6e-44 183.3 320 37.2
CSS0002508 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 3.4e-44 183.0 250 48.0
Rhsim11G0083400 Rhododendron simsii HOM05D005242 ORTHO05D006778 3.4e-44 183.0 268 44.8
CSS0020035 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 9.9e-44 181.4 250 47.6
CSS0021128 Camellia sinensis var. sinensis HOM05D005242 ORTHO05D006778 1.3e-43 181.0 294 39.1
Eucgr.F02701 Eucalyptus grandis HOM05D005242 ORTHO05D006778 2.9e-43 179.9 300 43.0
Haze_17757 Corylus avellana HOM05D005242 ORTHO05D006778 6.4e-43 178.7 202 50.5
CiPaw.16G012200 Carya illinoinensis HOM05D005242 ORTHO05D006778 1.9e-42 177.2 250 44.8
Actinidia29532 Actinidia chinensis HOM05D005242 ORTHO05D006778 3.2e-42 176.4 282 43.3
QL02p039039 Quercus lobata HOM05D005242 ORTHO05D006778 7.1e-42 175.3 169 53.8
AUR62026703 Chenopodium quinoa HOM05D005242 ORTHO05D006778 9.3e-42 174.9 292 42.1
Cfa018319 Carpinus fangiana HOM05D005242 ORTHO05D006778 1.6e-41 174.1 206 50.0
vmacro01456 Vaccinium macrocarpon HOM05D005242 ORTHO05D006778 2.1e-41 173.7 377 35.8
CAN.G18.12 Capsicum annuum HOM05D005242 ORTHO05D006778 3.5e-41 172.9 293 42.0
Prupe.8G031300 Prunus persica HOM05D005242 ORTHO05D006778 3.5e-41 172.9 247 43.7
MD05G1026800 Malus domestica HOM05D005242 ORTHO05D006778 6.0e-41 172.2 259 42.1
AUR62013591 Chenopodium quinoa HOM05D005242 ORTHO05D006778 7.9e-41 171.8 288 42.0
Sc26g0002570 Simmondsia chinensis HOM05D005242 ORTHO05D006778 1.0e-40 171.4 292 42.1
Potri.002G067700 Populus trichocarpa HOM05D005242 ORTHO05D006778 2.3e-40 170.2 190 48.9
PSO210G0022 Papaver somniferum HOM05D005242 ORTHO05D006778 6.7e-40 168.7 202 49.5
MD10G1026100 Malus domestica HOM05D005242 ORTHO05D006778 1.1e-39 167.9 271 42.1
COL.COLO4_08566 Corchorus olitorius HOM05D005242 ORTHO05D006778 1.5e-39 167.5 143 60.1
PSO447G0326 Papaver somniferum HOM05D005242 ORTHO05D006778 1.5e-39 167.5 160 56.2
Manes.02G179900 Manihot esculenta HOM05D005242 ORTHO05D006778 3.3e-39 166.4 171 55.0
arahy.Tifrunner.gnm1.ann1.3DXP20 Arachis hypogaea HOM05D005242 ORTHO05D006778 7.4e-39 165.2 227 44.1
arahy.Tifrunner.gnm1.ann1.H39N2I Arachis hypogaea HOM05D005242 ORTHO05D006778 1.6e-38 164.1 185 48.6
arahy.Tifrunner.gnm1.ann1.BM3N3L Arachis hypogaea HOM05D005242 ORTHO05D006778 2.1e-38 163.7 184 48.4
Aqoxy5G02077 Aquilegia oxysepala HOM05D005242 ORTHO05D006778 2.8e-38 163.3 265 39.6
arahy.Tifrunner.gnm1.ann1.661UAU Arachis hypogaea HOM05D005242 ORTHO05D006778 2.8e-38 163.3 227 42.7
EL10Ac1g01555 Beta vulgaris HOM05D005242 ORTHO05D006778 2.8e-38 163.3 295 36.3
Duzib041G0461 Durio zibethinus HOM05D005242 ORTHO05D006778 2.8e-38 163.3 171 52.6
Lj5g0003985 Lotus japonicus HOM05D005242 ORTHO05D006778 6.2e-38 162.2 173 51.4
Potri.005G192700 Populus trichocarpa HOM05D005242 ORTHO05D006778 1.4e-37 161.0 264 42.0
AT1G76770 Arabidopsis thaliana HOM05D005242 ORTHO05D006778 2.4e-37 160.2 139 59.0
Carub.0002s2368 Capsella rubella HOM05D005242 ORTHO05D006778 3.1e-37 159.8 139 58.3
Nn5g28757 Nelumbo nucifera HOM05D005242 ORTHO05D006778 3.1e-37 159.8 236 41.5
Thecc.08G153500 Theobroma cacao HOM05D005242 ORTHO05D006778 5.3e-37 159.1 169 52.7
CARHR070310 Cardamine hirsuta HOM05D005242 ORTHO05D006778 6.9e-37 158.7 144 53.5
TWI60G0101 Tripterygium wilfordii HOM05D005242 ORTHO05D006778 9.0e-37 158.3 286 37.8
Aa31LG4G6850 Aethionema arabicum HOM05D005242 ORTHO05D006778 1.5e-36 157.5 264 39.4
CiPaw.15G015900 Carya illinoinensis HOM05D005242 ORTHO05D006778 1.5e-36 157.5 267 41.6
FAN20G3127 Fragaria x ananassa HOM05D005242 ORTHO05D006778 2.0e-36 157.1 259 37.1
FAN27G0674 Fragaria x ananassa HOM05D005242 ORTHO05D006778 2.6e-36 156.8 189 44.4
Medtr1g098690 Medicago truncatula HOM05D005242 ORTHO05D006778 4.5e-36 156.0 182 50.5
A02p20880 Brassica napus HOM05D005242 ORTHO05D006778 5.8e-36 155.6 143 53.1
Psat6g192600 Pisum sativum HOM05D005242 ORTHO05D006778 1.0e-35 154.8 180 48.9
A07p42410 Brassica napus HOM05D005242 ORTHO05D006778 1.3e-35 154.5 140 55.7
C02p32790 Brassica napus HOM05D005242 ORTHO05D006778 2.2e-35 153.7 143 53.1
Lalb_Chr21g0305491 Lupinus albus HOM05D005242 ORTHO05D006778 2.9e-35 153.3 181 49.7
C06p50980 Brassica napus HOM05D005242 ORTHO05D006778 3.8e-35 152.9 135 56.3
FAN24G0150 Fragaria x ananassa HOM05D005242 ORTHO05D006778 4.9e-35 152.5 251 37.5
Ciclev10003945m.g Citrus clementina HOM05D005242 ORTHO05D006778 6.5e-35 152.1 292 39.0
BraA02t07119Z Brassica rapa HOM05D005242 ORTHO05D006778 1.1e-34 151.4 287 35.9
BolC6t40122H Brassica oleracea HOM05D005242 ORTHO05D006778 1.4e-34 151.0 133 56.4
RcHm_v2.0_Chr6g0275301 Rosa chinensis HOM05D005242 ORTHO05D006778 1.9e-34 150.6 246 38.2
FAN15G2695 Fragaria x ananassa HOM05D005242 ORTHO05D006778 2.5e-34 150.2 259 37.1
BraA07t31767Z Brassica rapa HOM05D005242 ORTHO05D006778 3.2e-34 149.8 141 55.3
AL2G36920 Arabidopsis lyrata HOM05D005242 ORTHO05D006778 7.1e-34 148.7 145 55.2
Medtr1246s0010 Medicago truncatula HOM05D005242 ORTHO05D006778 7.1e-34 148.7 143 53.8
VMungo0464G2160 Vigna mungo HOM05D005242 ORTHO05D006778 1.2e-33 147.9 250 39.2
THA.LOC104813717 Tarenaya hassleriana HOM05D005242 ORTHO05D006778 1.6e-33 147.5 170 45.9
Aa31LG4G6840 Aethionema arabicum HOM05D005242 ORTHO05D006778 3.5e-33 146.4 132 56.1
BolC2t09420H Brassica oleracea HOM05D005242 ORTHO05D018625 4.6e-33 146.0 151 50.3
Gorai.009G254600 Gossypium raimondii HOM05D005242 ORTHO05D006778 6.0e-33 145.6 219 45.2
unitig_52.g17530 Utricularia gibba HOM05D005242 ORTHO05D006778 7.9e-33 145.2 403 29.3
GSVIVG01034538001 Vitis vinifera HOM05D005242 ORTHO05D006778 7.9e-33 145.2 247 38.5
Atru.chr13.2099 Acer truncatum HOM05D005242 ORTHO05D006778 1.0e-32 144.8 252 37.7
Lalb_Chr19g0130231 Lupinus albus HOM05D005242 ORTHO05D006778 1.0e-32 144.8 247 41.3
TPR.G31185 Trifolium pratense HOM05D004559 ORTHO05D005283 1.0e-32 144.8 239 41.4
THA.LOC104812037 Tarenaya hassleriana HOM05D005242 ORTHO05D006778 2.3e-32 143.7 147 49.7
Psat1g101840 Pisum sativum HOM05D005242 ORTHO05D006778 3.0e-32 143.3 242 38.4
Sc02g0004040 Simmondsia chinensis HOM05D005242 ORTHO05D006778 3.0e-32 143.3 203 43.8
Glyma.10G224400 Glycine max HOM05D005242 ORTHO05D006778 3.9e-32 142.9 180 46.7
Sabra05G0147300 Salix brachista HOM05D005242 ORTHO05D006778 3.9e-32 142.9 249 40.6
AT1G76780 Arabidopsis thaliana HOM05D005242 ORTHO05D006778 5.1e-32 142.5 236 39.8
BcaC03g15701 Brassica carinata HOM05D005242 ORTHO05D006778 5.1e-32 142.5 287 34.5
VMungo0720G2917 Vigna mungo HOM05D005242 ORTHO05D006778 5.1e-32 142.5 145 51.7
Glyma.20G167400 Glycine max HOM05D005242 ORTHO05D006778 1.1e-31 141.4 174 48.3
Gohir.A05G243801 Gossypium hirsutum HOM05D005242 ORTHO05D006778 1.5e-31 141.0 240 40.4
Lj2g0024086 Lotus japonicus HOM05D005242 ORTHO05D006778 1.5e-31 141.0 263 37.6
Glyma.02G081300 Glycine max HOM05D005242 ORTHO05D006778 1.9e-31 140.6 234 40.6
DCAR_014441 Daucus carota HOM05D005242 ORTHO05D006778 3.3e-31 139.8 340 32.4
Glyma.16G166700 Glycine max HOM05D005242 ORTHO05D006778 3.3e-31 139.8 265 36.2
BraA02t07120Z Brassica rapa HOM05D005242 ORTHO05D018625 4.3e-31 139.4 244 36.9
Migut.N03213 Erythranthe guttata HOM05D005242 ORTHO05D006778 9.6e-31 138.3 149 53.7
Phvul.007G080300 Phaseolus vulgaris HOM05D005242 ORTHO05D006778 3.1e-29 133.3 192 41.7
A02p20890 Brassica napus HOM05D005242 ORTHO05D018625 4.0e-29 132.9 285 34.7
PGSC0003DMG402010796 Solanum tuberosum HOM05D005242 ORTHO05D006778 9.0e-29 131.7 294 33.3
Sopen12g029170 Solanum pennellii HOM05D005242 ORTHO05D006778 3.4e-28 129.8 292 34.9
Solyc12g056560.2 Solanum lycopersicum HOM05D005242 ORTHO05D006778 7.6e-28 128.6 292 32.9
Hund17437 Selenicereus undatus HOM05D005242 ORTHO05D006778 3.8e-27 126.3 275 34.5
Cpa.g.sc21.205 Carica papaya HOM05D005242 ORTHO05D006778 8.4e-27 125.2 202 42.1
Lsat_1_v5_gn_6_100581 Lactuca sativa HOM05D005242 ORTHO05D006778 5.5e-26 122.5 200 38.0
Nitab4.5_0002487g0010 Nicotiana tabacum HOM05D001302 ORTHO05D001107 5.5e-26 122.5 263 35.4
BcaB05g25009 Brassica carinata HOM05D005242 ORTHO05D006778 9.3e-26 121.7 145 47.6
CDE02G4447 Ceratophyllum demersum HOM05D005242 ORTHO05D006778 9.3e-26 121.7 301 33.9
Lsat_1_v5_gn_9_40940 Lactuca sativa HOM05D005242 ORTHO05D006778 6.1e-25 119.0 269 31.6
HanXRQChr05g0161961 Helianthus annuus HOM05D005242 ORTHO05D006778 7.9e-25 118.6 296 30.1
ATR0820G162 Amborella trichopoda HOM05D005242 ORTHO05D006778 3.9e-24 116.3 141 46.1
BcaC03g15702 Brassica carinata HOM05D005242 ORTHO05D018625 8.7e-24 115.2 139 43.2
ClCG09G010170 Citrullus lanatus HOM05D005242 ORTHO05D006778 9.7e-23 111.7 256 34.4
CDE08G0940 Ceratophyllum demersum HOM05D005242 ORTHO05D006778 2.4e-21 107.1 297 32.0
Nitab4.5_0004505g0020 Nicotiana tabacum HOM05D005242 ORTHO05D006778 2.6e-20 103.6 240 35.0
Ca_27679_v3 Cicer arietinum L. HOM05D005242 ORTHO05D006778 1.3e-19 101.3 226 34.1
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 2.5e-18 97.1 95 49.5
FvH4_2g13660 Fragaria vesca HOM05D005242 ORTHO05D006778 1.2e-17 94.7 202 31.7
BcaC03g15700 Brassica carinata HOM05D005242 ORTHO05D006778 2.5e-15 87.0 107 44.9
GSVIVG01034537001 Vitis vinifera HOM05D005242 ORTHO05D006778 4.3e-15 86.3 232 32.3
Sed0006497 Sechium edule HOM05D005242 ORTHO05D006778 4.1e-13 79.7 137 39.4
TWI60G1058 Tripterygium wilfordii HOM05D005242 ORTHO05D006778 1.5e-12 77.8 192 34.4
Carub.0002s2369 Capsella rubella HOM05D005242 ORTHO05D018625 3.4e-12 76.6 91 44.0
Sp5g31920 Schrenkiella parvula HOM05D005242 ORTHO05D006778 5.9e-12 75.9 64 56.2
ECA232G5004 Erigeron canadensis HOM05D005242 ORTHO05D006778 8.5e-11 72.0 205 27.8
SEGI_03948 Sequoiadendron giganteum HOM05D005242 ORTHO05D000080 2.5e-10 70.5 91 40.7
Phvul.004G094700 Phaseolus vulgaris HOM05D005242 ORTHO05D006778 3.6e-09 66.6 142 34.5
Ca_10684_v3 Cicer arietinum L. HOM05D005242 ORTHO05D006778 4.4e-07 59.7 97 38.1
Zm00001eb139380 Zea mays HOM05D005242 ORTHO05D006778 4.4e-07 59.7 102 31.4
ECA246G4795 Erigeron canadensis HOM05D000028 ORTHO05D001176 9.7e-07 58.5 251 26.7
arahy.Tifrunner.gnm1.ann1.0C6ZNN Arachis hypogaea HOM05D000136 ORTHO05D000080 4.8e-06 56.2 94 34.0
Manes.02G186800 Manihot esculenta HOM05D000136 ORTHO05D000080 6.3e-06 55.8 96 35.4
HPP92_004419 Vanilla planifolia HOM05D024549 ORTHO05D006778 6.3e-06 55.8 271 23.2
AL2G16910 Arabidopsis lyrata HOM05D000136 ORTHO05D000080 8.2e-06 55.5 93 32.3


User provided reference genes

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