Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011925.1 Olea europaea HOM05D005612 ORTHO05D007014 2.3e-69 265.4 130 100.0
Oeu055499.1 Olea europaea HOM05D005612 ORTHO05D007014 1.2e-44 183.3 200 52.5
MSTRG.17178 Avicennia marina HOM05D005612 ORTHO05D007014 2.5e-39 165.6 200 48.0
Migut.B01623 Erythranthe guttata HOM05D005612 ORTHO05D007014 8.0e-38 160.6 200 46.5
Actinidia12252 Actinidia chinensis HOM05D005612 ORTHO05D007014 1.8e-37 159.5 200 45.5
CSS0047351 Camellia sinensis var. sinensis HOM05D005612 ORTHO05D007014 1.8e-37 159.5 200 45.0
Hma1.2p1_2025F.1_g311480 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 1.8e-37 159.5 200 45.0
SalBow5G3218 Salvia bowleyana HOM05D005612 ORTHO05D007014 3.1e-37 158.7 200 46.0
Dinv43696 Davidia involucrata HOM05D005612 ORTHO05D007014 5.2e-37 157.9 200 45.0
Manes.01G266600 Manihot esculenta HOM05D005612 ORTHO05D007014 5.2e-37 157.9 200 45.5
GSVIVG01027677001 Vitis vinifera HOM05D005612 ORTHO05D007014 8.9e-37 157.1 200 45.0
vmacro13411 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 1.2e-36 156.8 200 45.5
Sabra14G0048200 Salix brachista HOM05D005612 ORTHO05D007014 2.6e-36 155.6 200 44.5
Potri.014G068500 Populus trichocarpa HOM05D005612 ORTHO05D007014 3.4e-36 155.2 200 44.0
DCAR_008555 Daucus carota HOM05D005612 ORTHO05D007014 4.4e-36 154.8 200 43.0
Hma1.2p1_0511F.1_g169190 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 5.8e-36 154.5 200 44.0
QL08p052678 Quercus lobata HOM05D005612 ORTHO05D007014 5.8e-36 154.5 200 45.0
Manes.05G046700 Manihot esculenta HOM05D005612 ORTHO05D007014 9.8e-36 153.7 200 44.5
CANSAT01G1400 Cannabis sativa HOM05D005612 ORTHO05D007014 3.7e-35 151.8 200 42.5
ClCG05G002330 Citrullus lanatus HOM05D005612 ORTHO05D007014 3.7e-35 151.8 199 43.7
FAN28G0581 Fragaria x ananassa HOM05D005612 ORTHO05D007014 3.7e-35 151.8 200 43.5
vmacro21020 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 3.7e-35 151.8 200 44.0
CsaV3_3G009760 Cucumis sativus L. HOM05D005612 ORTHO05D007014 8.3e-35 150.6 200 42.0
FAN28G2973 Fragaria x ananassa HOM05D005612 ORTHO05D007014 8.3e-35 150.6 200 43.5
Atru.chr2.2479 Acer truncatum HOM05D005612 ORTHO05D007014 1.1e-34 150.2 200 42.0
MELO3C006197.2 Cucumis melo HOM05D005612 ORTHO05D007014 1.1e-34 150.2 199 42.7
RcHm_v2.0_Chr3g0497141 Rosa chinensis HOM05D005612 ORTHO05D007014 1.4e-34 149.8 200 42.5
TAR375G1134 Trochodendron aralioides HOM05D005612 ORTHO05D007014 1.4e-34 149.8 200 43.5
Sed0014004 Sechium edule HOM05D005612 ORTHO05D007014 1.9e-34 149.4 200 42.5
CAN.G530.1 Capsicum annuum HOM05D005612 ORTHO05D007014 2.4e-34 149.1 200 43.0
Haze_16797 Corylus avellana HOM05D005612 ORTHO05D007014 2.4e-34 149.1 200 42.5
FAN26G0204 Fragaria x ananassa HOM05D005612 ORTHO05D007014 3.2e-34 148.7 200 43.0
FAN23G2738 Fragaria x ananassa HOM05D005612 ORTHO05D007014 4.1e-34 148.3 200 43.0
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 5.4e-34 147.9 200 42.5
Cfa015219 Carpinus fangiana HOM05D005612 ORTHO05D007014 7.0e-34 147.5 200 42.0
Ciclev10010228m.g Citrus clementina HOM05D005612 ORTHO05D007014 7.0e-34 147.5 200 43.0
Gohir.D08G156300 Gossypium hirsutum HOM05D005612 ORTHO05D007014 7.0e-34 147.5 200 41.5
Gorai.004G162600 Gossypium raimondii HOM05D005612 ORTHO05D007014 7.0e-34 147.5 200 41.5
Medtr4g053430 Medicago truncatula HOM05D005612 ORTHO05D007014 9.2e-34 147.1 200 42.5
Nitab4.5_0000264g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 1.2e-33 146.7 200 42.0
COL.COLO4_12531 Corchorus olitorius HOM05D005612 ORTHO05D007014 1.6e-33 146.4 200 41.0
FvH4_1g28100 Fragaria vesca HOM05D005612 ORTHO05D007014 1.6e-33 146.4 200 42.0
Gohir.A08G135500 Gossypium hirsutum HOM05D005612 ORTHO05D007014 1.6e-33 146.4 200 42.0
Peaxi162Scf00045g01936 Petunia axillaris HOM05D005612 ORTHO05D007014 1.6e-33 146.4 200 42.0
Duzib138G1608 Durio zibethinus HOM05D005612 ORTHO05D007014 2.1e-33 146.0 200 41.0
Solyc08g006610.3 Solanum lycopersicum HOM05D005612 ORTHO05D007014 2.7e-33 145.6 200 42.0
Cpa.g.sc18.108 Carica papaya HOM05D005612 ORTHO05D007014 4.6e-33 144.8 200 42.5
Psat0s2995g0040 Pisum sativum HOM05D005612 ORTHO05D007014 4.6e-33 144.8 200 42.5
Cc02_g24020 Coffea canephora HOM05D005612 ORTHO05D007014 6.0e-33 144.4 200 42.0
MD00G1094900 Malus domestica HOM05D005612 ORTHO05D007014 6.0e-33 144.4 199 40.2
Nn4g26368 Nelumbo nucifera HOM05D005612 ORTHO05D007014 6.0e-33 144.4 200 41.0
Sopen08g002560 Solanum pennellii HOM05D005612 ORTHO05D007014 6.0e-33 144.4 200 41.5
THA.LOC104827614 Tarenaya hassleriana HOM05D005612 ORTHO05D007014 6.0e-33 144.4 200 42.5
TWI14G1300 Tripterygium wilfordii HOM05D005612 ORTHO05D007014 6.0e-33 144.4 200 42.0
Lalb_Chr03g0039601 Lupinus albus HOM05D005612 ORTHO05D007014 7.8e-33 144.1 200 42.0
Nitab4.5_0005450g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 1.0e-32 143.7 200 41.5
TPR.G17234 Trifolium pratense HOM05D005612 ORTHO05D007014 1.0e-32 143.7 200 41.5
unitig_749.g14376 Utricularia gibba HOM05D005612 ORTHO05D007014 1.0e-32 143.7 200 41.5
unitig_76.g29085 Utricularia gibba HOM05D005612 ORTHO05D007014 1.0e-32 143.7 146 52.1
Aqoxy3G02061 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 2.3e-32 142.5 200 43.0
Lj3g0004128 Lotus japonicus HOM05D005612 ORTHO05D007014 2.3e-32 142.5 200 42.5
Aqoxy1G04104 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 3.0e-32 142.1 200 42.0
Ca_19396_v3 Cicer arietinum L. HOM05D005612 ORTHO05D007014 3.0e-32 142.1 200 41.5
Lsat_1_v5_gn_7_9741 Lactuca sativa HOM05D005612 ORTHO05D007014 3.9e-32 141.7 201 40.3
Lsat_1_v5_gn_8_86120 Lactuca sativa HOM05D005612 ORTHO05D007014 3.9e-32 141.7 201 39.8
Prupe.6G155400 Prunus persica HOM05D005612 ORTHO05D007014 3.9e-32 141.7 200 41.0
Thecc.01G378200 Theobroma cacao HOM05D005612 ORTHO05D007014 3.9e-32 141.7 200 41.0
Eucgr.E01443 Eucalyptus grandis HOM05D005612 ORTHO05D007014 5.1e-32 141.4 198 41.9
Sc16g0011470 Simmondsia chinensis HOM05D005612 ORTHO05D007014 6.6e-32 141.0 201 40.8
Carub.0004s2795 Capsella rubella HOM05D005612 ORTHO05D007014 8.6e-32 140.6 197 40.1
VMungo1127G0102 Vigna mungo HOM05D005612 ORTHO05D007014 8.6e-32 140.6 199 41.2
Phvul.011G138100 Phaseolus vulgaris HOM05D005612 ORTHO05D007014 1.5e-31 139.8 200 42.0
AL4G44420 Arabidopsis lyrata HOM05D005612 ORTHO05D007014 1.9e-31 139.4 197 40.6
Lalb_Chr01g0021461 Lupinus albus HOM05D005612 ORTHO05D007014 3.3e-31 138.7 200 42.0
PSO339G2081 Papaver somniferum HOM05D005612 ORTHO05D007014 3.3e-31 138.7 200 39.0
PSO384G4101 Papaver somniferum HOM05D005612 ORTHO05D007014 4.3e-31 138.3 200 39.5
Glyma.06G270700 Glycine max HOM05D005612 ORTHO05D007014 9.5e-31 137.1 201 41.8
EL10Ac4g10240 Beta vulgaris HOM05D005612 ORTHO05D007014 1.2e-30 136.7 201 39.3
BcaC01g05140 Brassica carinata HOM05D005612 ORTHO05D007014 1.2e-30 136.7 197 40.6
BolC3t15349H Brassica oleracea HOM05D005612 ORTHO05D007014 1.2e-30 136.7 197 40.6
CiPaw.01G263000 Carya illinoinensis HOM05D005612 ORTHO05D007014 2.1e-30 136.0 200 40.5
BraA03t11718Z Brassica rapa HOM05D005612 ORTHO05D007014 2.8e-30 135.6 197 40.1
Glyma.12G134000 Glycine max HOM05D005612 ORTHO05D007014 2.8e-30 135.6 200 41.5
HanXRQChr04g0122751 Helianthus annuus HOM05D005612 ORTHO05D007014 2.8e-30 135.6 201 38.8
PGR042G0232 Punica granatum HOM05D005612 ORTHO05D007014 2.8e-30 135.6 198 39.9
AUR62019310 Chenopodium quinoa HOM05D005612 ORTHO05D007014 3.6e-30 135.2 201 39.3
Thhalv10001485m.g Eutrema salsugineum HOM05D005612 ORTHO05D007014 6.2e-30 134.4 197 39.6
Sp4g27340 Schrenkiella parvula HOM05D005612 ORTHO05D007014 6.2e-30 134.4 197 39.6
A03p25180 Brassica napus HOM05D005612 ORTHO05D007014 8.1e-30 134.0 197 40.1
C03p30020 Brassica napus HOM05D005612 ORTHO05D007014 1.4e-29 133.3 197 39.1
AUR62000130 Chenopodium quinoa HOM05D005612 ORTHO05D007014 1.8e-29 132.9 210 38.1
Lj7C530T5 Lonicera japonica HOM05D005612 ORTHO05D007014 1.8e-29 132.9 174 43.7
AT2G45320 Arabidopsis thaliana HOM05D005612 ORTHO05D007014 2.3e-29 132.5 197 39.6
CDE07G1659 Ceratophyllum demersum HOM05D005612 ORTHO05D007014 1.2e-28 130.2 200 37.0
arahy.Tifrunner.gnm1.ann1.39QM8U Arachis hypogaea HOM05D005612 ORTHO05D007014 2.0e-28 129.4 200 39.0
BcaB01g03271 Brassica carinata HOM05D005612 ORTHO05D007014 3.4e-28 128.6 197 37.1
Hund07502 Selenicereus undatus HOM05D005612 ORTHO05D007014 3.4e-28 128.6 225 36.0
arahy.Tifrunner.gnm1.ann1.Q1YE57 Arachis hypogaea HOM05D005612 ORTHO05D007014 4.4e-28 128.3 200 39.0
ECA236G2759 Erigeron canadensis HOM05D005612 ORTHO05D007014 9.9e-28 127.1 201 36.3
FAN19G0199 Fragaria x ananassa HOM05D005612 ORTHO05D007014 2.4e-26 122.5 78 70.5
CiPaw.09G176500 Carya illinoinensis HOM05D005612 ORTHO05D007014 3.2e-26 122.1 143 44.1
Duzib138G0844 Durio zibethinus HOM05D005612 ORTHO05D007014 9.2e-26 120.6 78 69.2
CARHR140520 Cardamine hirsuta HOM05D005612 ORTHO05D007014 1.2e-25 120.2 78 70.5
ATR1100G025 Amborella trichopoda HOM05D005612 ORTHO05D007014 1.6e-25 119.8 200 36.5
Ah.04g161950 Amaranthus hybridus HOM05D004275 ORTHO05D005720 2.7e-25 119.0 228 33.3
ATR0686G054 Amborella trichopoda HOM05D005612 ORTHO05D007014 3.5e-25 118.6 200 36.0
Aa31LG1G26830 Aethionema arabicum HOM05D005612 ORTHO05D007014 1.0e-24 117.1 81 67.9
MBI14_g08144_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 1.1e-21 107.1 199 35.7
Rhsim01G0149000 Rhododendron simsii HOM05D005612 ORTHO05D007014 1.8e-21 106.3 124 46.8
MSTRG.28297 Avicennia marina HOM05D005612 ORTHO05D007014 2.0e-20 102.8 61 75.4
Zm00001eb195050 Zea mays HOM05D005612 ORTHO05D007014 5.8e-20 101.3 186 33.3
Zm00001eb012290 Zea mays HOM05D005612 ORTHO05D007014 1.9e-18 96.3 81 55.6
Zm00001eb249030 Zea mays HOM05D005612 ORTHO05D007014 3.5e-17 92.0 81 53.1
AagrBONN_evm.TU.Sc2ySwM_117.669 Anthoceros agrestis HOM05D005612 ORTHO05D007014 9.6e-15 84.0 81 45.7
Glyma.20G076400 Glycine max HOM05D005612 ORTHO05D007014 8.1e-14 80.9 65 56.9
SMO119G0175 Selaginella moellendorffii HOM05D005612 ORTHO05D007014 1.2e-12 77.0 81 45.7
Zm00001eb270960 Zea mays HOM05D005612 ORTHO05D002685 3.4e-12 75.5 56 60.7
Dinv32369 Davidia involucrata HOM05D005612 ORTHO05D007014 4.9e-11 71.6 44 70.5
SGA_v2.0_scaffold153G37000 Striga asiatica HOM05D005612 ORTHO05D007014 1.1e-10 70.5 155 31.6
Pp3c17_6010 Physcomitrium patens HOM05D005612 ORTHO05D007014 3.5e-09 65.5 89 43.8
Medtr8g102040 Medicago truncatula HOM05D005612 ORTHO05D007014 1.0e-08 63.9 78 43.6
Medtr8g102045 Medicago truncatula HOM05D005612 ORTHO05D007014 1.0e-08 63.9 40 70.0
TAR626G0370 Trochodendron aralioides HOM05D005612 ORTHO05D007014 5.1e-08 61.6 35 77.1


User provided reference genes

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