Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011882.1 Olea europaea HOM05D006233 ORTHO05D007247 2.9e-54 214.9 104 100.0
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 1.4e-16 89.7 103 53.4
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 2.4e-16 89.0 99 53.5
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 2.4e-16 89.0 108 50.0
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 1.2e-15 86.7 96 53.1
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 2.5e-10 68.9 95 51.6
SalBow7G1471 Salvia bowleyana HOM05D006233 ORTHO05D007247 2.5e-10 68.9 99 46.5
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 3.3e-10 68.6 96 44.8
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 5.7e-10 67.8 93 48.4
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.3e-09 66.6 93 46.2
QL05p010144 Quercus lobata HOM05D006233 ORTHO05D007247 1.3e-09 66.6 94 47.9
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 1.7e-09 66.2 93 49.5
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 1.7e-09 66.2 95 50.5
QL05p010226 Quercus lobata HOM05D006233 ORTHO05D007247 2.2e-09 65.9 97 49.5
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 2.8e-09 65.5 93 46.2
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 4.8e-09 64.7 92 45.7
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 4.8e-09 64.7 97 44.3
RcHm_v2.0_Chr5g0063721 Rosa chinensis HOM05D006233 ORTHO05D007247 4.8e-09 64.7 94 47.9
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 6.3e-09 64.3 93 44.1
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 6.3e-09 64.3 93 44.1
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 8.2e-09 63.9 95 50.5
vmacro18776 Vaccinium macrocarpon HOM05D006233 ORTHO05D007247 8.2e-09 63.9 97 42.3
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 1.8e-08 62.8 95 48.4
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 1.8e-08 62.8 92 44.6
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 3.1e-08 62.0 96 45.8
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 4.1e-08 61.6 93 43.0
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 5.3e-08 61.2 94 48.9
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 5.3e-08 61.2 101 44.6
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 6.9e-08 60.8 93 43.0
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 9.1e-08 60.5 96 49.0
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 9.1e-08 60.5 90 41.1
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 1.2e-07 60.1 94 42.6
BraA05t22362Z Brassica rapa HOM05D006233 ORTHO05D007247 1.5e-07 59.7 100 46.0
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 2.6e-07 58.9 103 40.8
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 4.5e-07 58.2 95 41.1
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 4.5e-07 58.2 95 42.1
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 5.9e-07 57.8 93 41.9
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 7.7e-07 57.4 92 44.6
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 7.7e-07 57.4 93 43.0
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 7.7e-07 57.4 95 47.4
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 1.0e-06 57.0 95 44.2
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 1.0e-06 57.0 103 40.8
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 1.0e-06 57.0 95 41.1
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 2.2e-06 55.8 95 44.2
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 2.9e-06 55.5 99 44.4
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 2.9e-06 55.5 95 41.1
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 2.9e-06 55.5 95 42.1
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 3.8e-06 55.1 96 41.7
CSS0050466 Camellia sinensis var. sinensis HOM05D006233 ORTHO05D007247 5.0e-06 54.7 94 43.6
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 6.5e-06 54.3 93 41.9
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 6.5e-06 54.3 96 39.6


User provided reference genes

Program Settings