Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011769.5 Olea europaea HOM05D004981 ORTHO05D005635 5.7e-226 787.3 424 100.0
Oeu047361.1 Olea europaea HOM05D004981 ORTHO05D005635 4.3e-149 531.9 407 72.2
Dinv24195 Davidia involucrata HOM05D004981 ORTHO05D005635 3.8e-97 359.4 408 53.4
Cc02_g21590 Coffea canephora HOM05D004981 ORTHO05D005635 2.3e-94 350.1 400 53.5
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 2.2e-92 343.6 409 50.9
PGSC0003DMG400011507 Solanum tuberosum HOM05D004981 ORTHO05D005635 4.9e-92 342.4 384 53.6
MSTRG.20297 Avicennia marina HOM05D004981 ORTHO05D005635 7.0e-91 338.6 292 63.4
CAN.G274.6 Capsicum annuum HOM05D004981 ORTHO05D005635 1.0e-89 334.7 379 52.2
SGA_v2.0_scaffold83G26298 Striga asiatica HOM05D004981 ORTHO05D005635 5.0e-89 332.4 456 49.8
Sopen04g004240 Solanum pennellii HOM05D004981 ORTHO05D005635 8.6e-89 331.6 385 53.0
Nitab4.5_0008051g0010 Nicotiana tabacum HOM05D004981 ORTHO05D005635 1.5e-88 330.9 372 54.6
Solyc04g009060.4 Solanum lycopersicum HOM05D004981 ORTHO05D005635 2.5e-88 330.1 385 53.0
Peaxi162Scf00152g01024 Petunia axillaris HOM05D004981 ORTHO05D005635 1.2e-87 327.8 359 54.6
Migut.B00612 Erythranthe guttata HOM05D004981 ORTHO05D005635 2.1e-87 327.0 384 51.3
CSS0034779 Camellia sinensis var. sinensis HOM05D004981 ORTHO05D005635 4.0e-86 322.8 405 49.9
TAR114G0002 Trochodendron aralioides HOM05D004981 ORTHO05D005635 3.7e-84 316.2 369 52.3
Rhsim05G0107500 Rhododendron simsii HOM05D004981 ORTHO05D005635 2.4e-83 313.5 467 46.9
Lj5A239G83 Lonicera japonica HOM05D004981 ORTHO05D005635 2.1e-82 310.5 358 52.2
Sed0011642 Sechium edule HOM05D004981 ORTHO05D005635 1.0e-81 308.1 406 47.5
Rhsim05G0107600 Rhododendron simsii HOM05D004981 ORTHO05D005635 1.3e-81 307.8 469 46.1
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 1.1e-80 304.7 417 46.5
Gohir.D13G054600 Gossypium hirsutum HOM05D004981 ORTHO05D005635 2.5e-80 303.5 412 46.6
Gorai.013G061400 Gossypium raimondii HOM05D004981 ORTHO05D005635 4.3e-80 302.8 412 46.8
Gohir.A03G173700 Gossypium hirsutum HOM05D004981 ORTHO05D005635 1.6e-79 300.8 448 46.9
Nn5g30124 Nelumbo nucifera HOM05D004981 ORTHO05D005635 4.7e-79 299.3 404 46.5
Gohir.A13G067000 Gossypium hirsutum HOM05D004981 ORTHO05D005635 1.1e-78 298.1 411 46.5
GSVIVG01029180001 Vitis vinifera HOM05D004981 ORTHO05D005635 1.8e-78 297.4 403 46.9
Prupe.8G061500 Prunus persica HOM05D004981 ORTHO05D005635 2.3e-78 297.0 420 44.8
MELO3C018646.2 Cucumis melo HOM05D004981 ORTHO05D005635 6.8e-78 295.4 405 46.4
Duzib132G0770 Durio zibethinus HOM05D004981 ORTHO05D005635 6.8e-78 295.4 414 44.2
Thecc.02G139100 Theobroma cacao HOM05D004981 ORTHO05D005635 8.9e-78 295.0 408 46.6
SalBow5G0436 Salvia bowleyana HOM05D004981 ORTHO05D005635 1.5e-77 294.3 371 49.3
Gorai.005G219800 Gossypium raimondii HOM05D004981 ORTHO05D005635 3.4e-77 293.1 409 46.9
CiPaw.06G153000 Carya illinoinensis HOM05D004981 ORTHO05D005635 7.5e-77 292.0 379 46.7
vmacro19928 Vaccinium macrocarpon HOM05D004981 ORTHO05D005635 1.3e-76 291.2 473 42.9
Duzib248G0633 Durio zibethinus HOM05D004981 ORTHO05D005635 1.7e-76 290.8 412 45.6
Hma1.2p1_0704F.1_g206680 Hydrangea macrophylla HOM05D004981 ORTHO05D005635 1.7e-76 290.8 336 53.0
Gohir.D02G196800 Gossypium hirsutum HOM05D004981 ORTHO05D005635 2.2e-76 290.4 409 46.7
QL11p020696 Quercus lobata HOM05D004981 ORTHO05D005635 2.2e-76 290.4 432 44.4
TWI59G1067 Tripterygium wilfordii HOM05D004981 ORTHO05D005635 8.3e-76 288.5 413 46.2
MD05G1045100 Malus domestica HOM05D004981 ORTHO05D005635 4.1e-75 286.2 423 44.4
CsaV3_7G006460 Cucumis sativus L. HOM05D004981 ORTHO05D005635 5.4e-75 285.8 405 45.7
CANSAT11G0061 Cannabis sativa HOM05D004981 ORTHO05D005635 3.9e-73 279.6 402 45.5
Ca_00133_v3 Cicer arietinum L. HOM05D004981 ORTHO05D005635 1.9e-72 277.3 402 45.5
Manes.06G012400 Manihot esculenta HOM05D004981 ORTHO05D005635 4.3e-72 276.2 415 46.0
PGR142G3166 Punica granatum HOM05D004981 ORTHO05D005635 4.3e-72 276.2 406 45.1
Cpa.g.sc49.24 Carica papaya HOM05D004981 ORTHO05D005635 1.2e-71 274.6 391 45.0
Lj6g0025255 Lotus japonicus HOM05D004981 ORTHO05D005635 2.8e-71 273.5 411 43.1
Phvul.006G206700 Phaseolus vulgaris HOM05D004981 ORTHO05D005635 4.7e-71 272.7 402 45.8
ClCG09G015370 Citrullus lanatus HOM05D004981 ORTHO05D005635 8.1e-71 271.9 410 44.9
HanXRQChr16g0514321 Helianthus annuus HOM05D004981 ORTHO05D005635 8.1e-71 271.9 391 45.0
Lalb_Chr20g0123041 Lupinus albus HOM05D004981 ORTHO05D005635 8.1e-71 271.9 394 44.7
VMungo0540G0644 Vigna mungo HOM05D004981 ORTHO05D005635 1.1e-70 271.6 393 46.6
Sc20g0002060 Simmondsia chinensis HOM05D004981 ORTHO05D005635 2.4e-70 270.4 413 44.3
Dinv09034 Davidia involucrata HOM05D004981 ORTHO05D005635 4.0e-70 269.6 286 52.8
Potri.003G023700 Populus trichocarpa HOM05D004981 ORTHO05D005635 4.0e-70 269.6 394 46.2
COL.COLO4_24958 Corchorus olitorius HOM05D004981 ORTHO05D005635 5.2e-70 269.2 400 44.0
arahy.Tifrunner.gnm1.ann1.NXB9BB Arachis hypogaea HOM05D004981 ORTHO05D005635 6.8e-70 268.9 403 45.4
arahy.Tifrunner.gnm1.ann1.NS4PA6 Arachis hypogaea HOM05D004981 ORTHO05D005635 8.9e-70 268.5 403 45.2
ECA234G4021 Erigeron canadensis HOM05D004981 ORTHO05D005635 1.5e-69 267.7 383 44.1
Lsat_1_v5_gn_5_107300 Lactuca sativa HOM05D004981 ORTHO05D005635 3.4e-69 266.5 369 46.6
Potri.001G205700 Populus trichocarpa HOM05D004981 ORTHO05D005635 7.6e-69 265.4 415 41.9
CDE10G0645 Ceratophyllum demersum HOM05D004981 ORTHO05D005635 1.3e-68 264.6 402 41.5
Nitab4.5_0000480g0020 Nicotiana tabacum HOM05D004981 ORTHO05D005635 1.7e-68 264.2 288 55.2
MBI02_g08724_MAGBIO Magnolia biondii HOM05D004981 ORTHO05D005635 2.9e-68 263.5 387 45.7
Atru.chr5.2124 Acer truncatum HOM05D004981 ORTHO05D005635 3.8e-68 263.1 419 43.7
Medtr2g008810 Medicago truncatula HOM05D004981 ORTHO05D005635 1.1e-67 261.5 382 46.1
Glyma.15G053300 Glycine max HOM05D004981 ORTHO05D005635 6.0e-66 255.8 475 42.3
DCAR_021855 Daucus carota HOM05D004981 ORTHO05D005635 1.0e-65 255.0 401 44.1
ATR0753G166 Amborella trichopoda HOM05D004981 ORTHO05D005635 1.2e-63 248.1 431 41.5
Glyma.08G179200 Glycine max HOM05D004981 ORTHO05D005635 2.8e-63 246.9 433 41.6
Psat1g216680 Pisum sativum HOM05D004981 ORTHO05D005635 2.8e-63 246.9 389 44.5
Eucgr.I02666 Eucalyptus grandis HOM05D004981 ORTHO05D005635 6.2e-63 245.7 294 51.0
Ciclev10025761m.g Citrus clementina HOM05D004981 ORTHO05D005635 3.4e-61 240.0 420 41.4
Sabra01G0158000 Salix brachista HOM05D004981 ORTHO05D005635 1.1e-59 235.0 439 38.3
THA.LOC104818438 Tarenaya hassleriana HOM05D004981 ORTHO05D005635 2.3e-57 227.3 375 41.9
Aa31LG3G17630 Aethionema arabicum HOM05D004981 ORTHO05D005635 4.3e-56 223.0 389 39.6
TPR.G9514 Trifolium pratense HOM05D004981 ORTHO05D005635 4.3e-56 223.0 333 42.9
RcHm_v2.0_Chr7g0191681 Rosa chinensis HOM05D004981 ORTHO05D005635 3.6e-55 219.9 305 47.5
TPR.G21754 Trifolium pratense HOM05D004981 ORTHO05D005635 2.4e-54 217.2 265 49.1
A10p27880 Brassica napus HOM05D004981 ORTHO05D005635 9.0e-54 215.3 312 42.6
SEGI_39436 Sequoiadendron giganteum HOM05D004981 ORTHO05D005635 9.0e-54 215.3 400 39.2
C09p67980 Brassica napus HOM05D004981 ORTHO05D005635 1.2e-53 214.9 312 43.3
BolC9t59557H Brassica oleracea HOM05D004981 ORTHO05D005635 1.2e-53 214.9 312 43.3
BraA10t44837Z Brassica rapa HOM05D004981 ORTHO05D005635 1.5e-53 214.5 312 42.6
Prupe.5G160300 Prunus persica HOM05D004981 ORTHO05D005635 1.5e-53 214.5 406 39.9
FAN18G1425 Fragaria x ananassa HOM05D004981 ORTHO05D005635 3.4e-53 213.4 414 39.6
Sabra03G0014800 Salix brachista HOM05D004981 ORTHO05D005635 7.6e-53 212.2 269 48.7
FAN04G0403 Fragaria x ananassa HOM05D004981 ORTHO05D005635 9.9e-53 211.8 393 39.7
AUR62010122 Chenopodium quinoa HOM05D004981 ORTHO05D005635 1.7e-52 211.1 383 39.7
Zm00001eb311320 Zea mays HOM05D004981 ORTHO05D005635 3.8e-52 209.9 402 36.8
PSO781G0052 Papaver somniferum HOM05D004981 ORTHO05D005635 8.4e-52 208.8 408 37.5
AUR62013118 Chenopodium quinoa HOM05D004981 ORTHO05D005635 4.2e-51 206.5 442 38.0
EL10Ac9g21471 Beta vulgaris HOM05D004981 ORTHO05D005635 1.2e-50 204.9 386 38.9
Sp6g33940 Schrenkiella parvula HOM05D004981 ORTHO05D005635 2.3e-49 200.7 301 43.2
Medtr5g017190 Medicago truncatula HOM05D004981 ORTHO05D005635 3.0e-49 200.3 259 49.4
FAN08G0200 Fragaria x ananassa HOM05D004981 ORTHO05D005635 8.7e-49 198.7 297 44.4
FvH4_5g07000 Fragaria vesca HOM05D004981 ORTHO05D005635 1.1e-48 198.4 397 40.3
Mapoly0041s0053 Marchantia polymorpha HOM05D004981 ORTHO05D005635 2.5e-48 197.2 342 39.8
Hund00058 Selenicereus undatus HOM05D004981 ORTHO05D005635 4.8e-47 193.0 274 44.2
BcaB08g37209 Brassica carinata HOM05D004981 ORTHO05D005635 1.2e-45 188.3 287 42.2
MD14G1166200 Malus domestica HOM05D004981 ORTHO05D005635 1.5e-45 188.0 396 37.9
PSO541G0435 Papaver somniferum HOM05D004981 ORTHO05D005635 2.0e-45 187.6 407 35.9
AT5G09390 Arabidopsis thaliana HOM05D004981 ORTHO05D005635 4.5e-45 186.4 270 43.0
Thhalv10013574m.g Eutrema salsugineum HOM05D004981 ORTHO05D005635 9.9e-45 185.3 272 43.8
Pp3c22_4170 Physcomitrium patens HOM05D004981 ORTHO05D005635 2.2e-44 184.1 360 37.8
AL6G19780 Arabidopsis lyrata HOM05D004981 ORTHO05D005635 6.4e-44 182.6 340 39.1
Carub.0006s0794 Capsella rubella HOM05D004981 ORTHO05D005635 2.1e-42 177.6 327 39.1
Os09g0372400 Oryza sativa ssp. japonica HOM05D004981 ORTHO05D005635 2.7e-42 177.2 304 39.5
COL.COLO4_15286 Corchorus olitorius HOM05D004981 ORTHO05D005635 1.3e-41 174.9 316 42.1
HPP92_013108 Vanilla planifolia HOM05D004981 ORTHO05D005635 5.1e-41 172.9 265 41.5
Aqoxy6G00803 Aquilegia oxysepala HOM05D004981 ORTHO05D005635 1.5e-40 171.4 379 36.9
CARHR204020 Cardamine hirsuta HOM05D004981 ORTHO05D005635 5.8e-37 159.5 245 40.4
AagrBONN_evm.TU.Sc2ySwM_117.1804 Anthoceros agrestis HOM05D004981 ORTHO05D005635 1.1e-35 155.2 257 41.6
Lj1g0016172 Lotus japonicus HOM05D004981 ORTHO05D005635 1.8e-33 147.9 413 33.2
SMO356G0631 Selaginella moellendorffii HOM05D004981 ORTHO05D005635 1.8e-33 147.9 262 35.1
Ah.01g009580 Amaranthus hybridus HOM05D004981 ORTHO05D005635 6.3e-31 139.4 259 35.9
CBR_g31506 Chara braunii HOM05D004981 ORTHO05D005635 6.3e-31 139.4 307 36.5
HPP92_013085 Vanilla planifolia HOM05D004981 ORTHO05D005635 1.2e-29 135.2 349 34.1
FAN08G2142 Fragaria x ananassa HOM05D004981 ORTHO05D005635 3.3e-24 117.1 417 34.5
VMungo1383G1991 Vigna mungo HOM05D004981 ORTHO05D005635 3.4e-21 107.1 185 40.0
Thecc.06G050700 Theobroma cacao HOM05D004981 ORTHO05D005635 6.7e-17 92.8 86 53.5
Ah.01g009610 Amaranthus hybridus HOM05D004981 ORTHO05D005635 7.4e-16 89.4 172 42.4
FAN21G1455 Fragaria x ananassa HOM05D004981 ORTHO05D005635 9.1e-14 82.4 290 31.4
Lsat_1_v5_gn_5_82561 Lactuca sativa HOM05D004981 ORTHO05D005635 9.1e-14 82.4 118 52.5
RcHm_v2.0_Chr7g0224681 Rosa chinensis HOM05D004981 ORTHO05D005635 2.6e-13 80.9 263 35.0
CDE10G1193 Ceratophyllum demersum HOM05D004981 ORTHO05D005635 2.1e-10 71.2 78 46.2
FvH4_4g13240 Fragaria vesca HOM05D004981 ORTHO05D005635 1.4e-09 68.6 73 54.8
Lsat_1_v5_gn_5_14961 Lactuca sativa HOM05D004981 ORTHO05D005635 5.2e-09 66.6 191 38.7
Cre06.g299450 Chlamydomonas reinhardtii HOM05D004981 ORTHO05D005635 2.6e-08 64.3 91 41.8
FAN12G0625 Fragaria x ananassa HOM05D004981 ORTHO05D005635 3.3e-08 63.9 73 52.1
FAN17G2803 Fragaria x ananassa HOM05D004981 ORTHO05D005635 5.7e-08 63.2 139 33.8
C05p07220 Brassica napus HOM05D001624 ORTHO05D005635 9.7e-08 62.4 177 27.7
Lsat_1_v5_gn_4_93920 Lactuca sativa HOM05D004981 ORTHO05D005635 1.4e-06 58.5 137 40.1
VMungo1383G0650 Vigna mungo HOM05D004981 ORTHO05D005635 1.8e-06 58.2 130 38.5
BcaC05g24776 Brassica carinata HOM05D004981 ORTHO05D005635 7.0e-06 56.2 48 50.0


User provided reference genes

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