Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011693.1 Olea europaea HOM05D004054 ORTHO05D004945 0.0e+00 2515.7 1280 100.0
Migut.L01344 Erythranthe guttata HOM05D004054 ORTHO05D004945 1.6e-287 993.4 763 68.3
SGA_v2.0_scaffold302G47866 Striga asiatica HOM05D004054 ORTHO05D004945 3.5e-279 965.7 775 65.0
Oeu028539.1 Olea europaea HOM05D004054 ORTHO05D004945 7.4e-277 958.0 789 65.3
MSTRG.671 Avicennia marina HOM05D004054 ORTHO05D004945 9.7e-277 957.6 766 66.6
Peaxi162Scf00209g00326 Petunia axillaris HOM05D004054 ORTHO05D004945 4.5e-274 948.7 811 63.5
Rhsim01G0215700 Rhododendron simsii HOM05D004054 ORTHO05D004945 2.7e-271 939.5 785 64.3
TAR362G0462 Trochodendron aralioides HOM05D004054 ORTHO05D004945 1.1e-269 934.1 791 64.6
Sopen05g002990 Solanum pennellii HOM05D004054 ORTHO05D004945 1.4e-267 927.2 781 64.4
Nitab4.5_0009649g0020 Nicotiana tabacum HOM05D004054 ORTHO05D004945 6.5e-265 918.3 760 64.5
Actinidia05393 Actinidia chinensis HOM05D004054 ORTHO05D004945 5.5e-264 915.2 791 63.0
Cc11_g13490 Coffea canephora HOM05D004054 ORTHO05D004945 2.3e-262 909.8 788 61.9
Hma1.2p1_1545F.1_g289900 Hydrangea macrophylla HOM05D004054 ORTHO05D004945 4.4e-261 905.6 757 64.9
SalBow2G0733 Salvia bowleyana HOM05D004054 ORTHO05D004945 5.7e-261 905.2 850 58.9
SalBow2G2854 Salvia bowleyana HOM05D004054 ORTHO05D004945 7.4e-261 904.8 850 58.9
vmacro07429 Vaccinium macrocarpon HOM05D004054 ORTHO05D004945 3.1e-259 899.4 842 59.4
Cfa009037 Carpinus fangiana HOM05D004054 ORTHO05D004945 3.4e-258 896.0 787 62.3
QL03p065666 Quercus lobata HOM05D004054 ORTHO05D004945 1.0e-257 894.4 789 62.6
Thecc.02G355300 Theobroma cacao HOM05D004054 ORTHO05D004945 7.2e-256 888.3 770 63.0
GSVIVG01036940001 Vitis vinifera HOM05D004054 ORTHO05D004945 8.0e-255 884.8 776 62.6
Dinv24955 Davidia involucrata HOM05D004054 ORTHO05D004945 1.5e-253 880.6 721 66.4
Nitab4.5_0008717g0030 Nicotiana tabacum HOM05D004054 ORTHO05D004945 2.2e-252 876.7 761 62.3
MD16G1078700 Malus domestica HOM05D004054 ORTHO05D004945 1.2e-250 870.9 777 62.0
RcHm_v2.0_Chr4g0440641 Rosa chinensis HOM05D004054 ORTHO05D004945 5.9e-250 868.6 767 61.5
CSS0048330 Camellia sinensis var. sinensis HOM05D004054 ORTHO05D004945 3.8e-249 865.9 769 61.2
DCAR_027382 Daucus carota HOM05D004054 ORTHO05D004945 6.5e-249 865.1 762 60.8
RcHm_v2.0_Chr1g0353921 Rosa chinensis HOM05D004054 ORTHO05D004945 3.6e-247 859.4 767 61.4
RcHm_v2.0_Chr1g0331881 Rosa chinensis HOM05D004054 ORTHO05D004945 4.7e-247 859.0 767 61.3
Ciclev10030693m.g Citrus clementina HOM05D004054 ORTHO05D004945 1.0e-246 857.8 788 61.0
Prupe.1G267800 Prunus persica HOM05D004054 ORTHO05D004945 1.4e-246 857.4 772 62.2
MBI11_g00106_MAGBIO Magnolia biondii HOM05D004054 ORTHO05D004945 1.8e-246 857.1 787 59.1
COL.COLO4_07923 Corchorus olitorius HOM05D004054 ORTHO05D004945 4.0e-246 855.9 784 61.0
MD13G1079000 Malus domestica HOM05D004054 ORTHO05D004945 5.2e-246 855.5 774 61.4
FvH4_4g31960 Fragaria vesca HOM05D004054 ORTHO05D004945 1.5e-245 854.0 780 60.3
FAN12G3951 Fragaria x ananassa HOM05D004054 ORTHO05D004945 3.3e-245 852.8 766 60.6
Duzib268G1532 Durio zibethinus HOM05D004054 ORTHO05D004945 1.3e-244 850.9 780 60.9
Gorai.013G077900 Gossypium raimondii HOM05D004054 ORTHO05D004945 2.4e-243 846.7 772 60.5
ECA247G4086 Erigeron canadensis HOM05D004054 ORTHO05D004945 3.1e-243 846.3 790 59.4
FAN22G1878 Fragaria x ananassa HOM05D004054 ORTHO05D004945 4.1e-243 845.9 776 60.2
Gohir.A13G052300 Gossypium hirsutum HOM05D004054 ORTHO05D004945 2.0e-242 843.6 776 60.1
Gohir.D13G068400 Gossypium hirsutum HOM05D004054 ORTHO05D004945 4.5e-242 842.4 773 60.4
Aqoxy5G00175 Aquilegia oxysepala HOM05D004054 ORTHO05D004945 1.0e-241 841.3 781 59.2
GSVIVG01020074001 Vitis vinifera HOM05D004054 ORTHO05D004945 8.5e-241 838.2 785 59.1
FAN17G1509 Fragaria x ananassa HOM05D004054 ORTHO05D004945 1.1e-240 837.8 767 60.2
Haze_12066 Corylus avellana HOM05D004054 ORTHO05D004945 1.5e-240 837.4 890 54.8
Lsat_1_v5_gn_8_54080 Lactuca sativa HOM05D004054 ORTHO05D004945 9.4e-240 834.7 791 59.3
FAN07G1439 Fragaria x ananassa HOM05D004054 ORTHO05D004945 2.1e-239 833.6 779 59.4
TWI36G0714 Tripterygium wilfordii HOM05D004054 ORTHO05D004945 2.1e-239 833.6 775 58.8
PSO832G3945 Papaver somniferum HOM05D004054 ORTHO05D004945 4.7e-239 832.4 796 57.9
MBI17_g39912_MAGBIO Magnolia biondii HOM05D004054 ORTHO05D004945 1.8e-238 830.5 767 58.9
Duzib248G1634 Durio zibethinus HOM05D004054 ORTHO05D004945 5.2e-238 828.9 773 59.8
Ca_22853_v3 Cicer arietinum L. HOM05D004054 ORTHO05D004945 6.8e-238 828.6 792 59.5
Atru.chr11.1851 Acer truncatum HOM05D004054 ORTHO05D004945 9.8e-237 824.7 750 61.2
ClCG05G024580 Citrullus lanatus HOM05D004054 ORTHO05D004945 6.3e-236 822.0 793 58.8
Eucgr.B03410 Eucalyptus grandis HOM05D004054 ORTHO05D004945 1.8e-235 820.5 799 57.2
Potri.010G033900 Populus trichocarpa HOM05D004054 ORTHO05D004945 7.0e-235 818.5 783 59.9
Sed0026408 Sechium edule HOM05D004054 ORTHO05D004945 1.2e-234 817.8 788 57.2
Medtr8g469270 Medicago truncatula HOM05D004054 ORTHO05D004945 2.7e-234 816.6 788 58.6
Phvul.003G069800 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 4.5e-234 815.8 783 58.9
Glyma.08G296300 Glycine max HOM05D004054 ORTHO05D004945 5.9e-234 815.5 782 59.7
VMungo0251G1664 Vigna mungo HOM05D004054 ORTHO05D004945 1.0e-233 814.7 790 58.4
Glyma.18G126000 Glycine max HOM05D004054 ORTHO05D004945 2.3e-233 813.5 782 59.6
Sabra10G0030700 Salix brachista HOM05D004054 ORTHO05D004945 2.3e-233 813.5 821 57.2
CsaV3_5G032370 Cucumis sativus L. HOM05D004054 ORTHO05D004945 5.0e-233 812.4 769 58.9
Lj4g0012636 Lotus japonicus HOM05D004054 ORTHO05D004945 2.0e-229 800.4 779 58.3
TPR.G33257 Trifolium pratense HOM05D004054 ORTHO05D004945 7.5e-229 798.5 768 58.9
arahy.Tifrunner.gnm1.ann1.K6PP8H Arachis hypogaea HOM05D004054 ORTHO05D004945 1.4e-227 794.3 791 58.4
PSO764G0096 Papaver somniferum HOM05D004054 ORTHO05D004945 2.4e-227 793.5 793 56.0
PGR102G2139 Punica granatum HOM05D004054 ORTHO05D004945 5.4e-227 792.3 780 56.2
Lalb_Chr16g0392581 Lupinus albus HOM05D004054 ORTHO05D004945 9.2e-227 791.6 778 58.2
Sc11g0001680 Simmondsia chinensis HOM05D004054 ORTHO05D004945 1.6e-226 790.8 765 57.4
Manes.05G096500 Manihot esculenta HOM05D004054 ORTHO05D004945 4.5e-226 789.3 763 59.4
Solyc05g007030.4 Solanum lycopersicum HOM05D004054 ORTHO05D004945 5.9e-226 788.9 609 67.8
Thhalv10020058m.g Eutrema salsugineum HOM05D004054 ORTHO05D004945 4.3e-224 782.7 776 56.8
HanXRQChr12g0369801 Helianthus annuus HOM05D004054 ORTHO05D004945 3.6e-223 779.6 785 57.5
Hund25271 Selenicereus undatus HOM05D004054 ORTHO05D004945 4.0e-222 776.2 802 55.2
Sp3g16020 Schrenkiella parvula HOM05D004054 ORTHO05D004945 2.6e-221 773.5 786 56.0
Psat4g132120 Pisum sativum HOM05D004054 ORTHO05D004945 3.4e-221 773.1 782 56.0
Carub.0003s1763 Capsella rubella HOM05D004054 ORTHO05D004945 1.3e-220 771.2 782 55.5
Gorai.008G182900 Gossypium raimondii HOM05D004054 ORTHO05D004945 1.3e-220 771.2 778 56.7
Gohir.D12G170300 Gossypium hirsutum HOM05D004054 ORTHO05D004945 1.7e-220 770.8 778 56.6
CARHR093230 Cardamine hirsuta HOM05D004054 ORTHO05D004945 1.4e-219 767.7 782 55.5
AL3G31070 Arabidopsis lyrata HOM05D004054 ORTHO05D004945 3.2e-219 766.5 782 55.6
MELO3C012068.2 Cucumis melo HOM05D004054 ORTHO05D004945 4.1e-219 766.1 749 57.8
AT3G17900 Arabidopsis thaliana HOM05D004054 ORTHO05D004945 4.6e-218 762.7 769 55.7
BcaB04g20809 Brassica carinata HOM05D004054 ORTHO05D004945 6.6e-217 758.8 777 55.5
THA.LOC104820344 Tarenaya hassleriana HOM05D004054 ORTHO05D004945 8.6e-217 758.4 788 55.8
AUR62026447 Chenopodium quinoa HOM05D004054 ORTHO05D004945 2.5e-216 756.9 778 55.5
Nn3g19739 Nelumbo nucifera HOM05D004054 ORTHO05D004945 8.0e-215 751.9 728 57.1
Glyma.02G021900 Glycine max HOM05D004054 ORTHO05D004945 6.8e-214 748.8 777 55.0
Psat2g124400 Pisum sativum HOM05D004054 ORTHO05D004945 1.5e-213 747.7 786 54.2
Lalb_Chr09g0335271 Lupinus albus HOM05D004054 ORTHO05D004945 1.7e-212 744.2 773 56.3
Aa31LG8G4770 Aethionema arabicum HOM05D004054 ORTHO05D004945 1.1e-211 741.5 824 52.7
A01p36490 Brassica napus HOM05D004054 ORTHO05D004945 2.1e-210 737.3 784 54.5
BraA03t13202Z Brassica rapa HOM05D004054 ORTHO05D004945 9.5e-208 728.4 769 54.5
AUR62026254 Chenopodium quinoa HOM05D004054 ORTHO05D004945 1.6e-207 727.6 769 55.0
C03p49280 Brassica napus HOM05D004054 ORTHO05D004945 2.1e-207 727.2 770 54.4
BcaC09g48754 Brassica carinata HOM05D004054 ORTHO05D004945 3.6e-207 726.5 777 53.9
C01p46250 Brassica napus HOM05D004054 ORTHO05D004945 1.1e-206 724.9 776 53.5
BraA01t03713Z Brassica rapa HOM05D004054 ORTHO05D004945 2.3e-206 723.8 785 53.1
BolC1t04586H Brassica oleracea HOM05D004054 ORTHO05D004945 1.2e-205 721.5 776 53.5
BolC3t17216H Brassica oleracea HOM05D004054 ORTHO05D004945 7.5e-205 718.8 770 54.0
Ca_04741_v3 Cicer arietinum L. HOM05D004054 ORTHO05D004945 6.6e-201 705.7 768 53.0
BcaB04g18970 Brassica carinata HOM05D004054 ORTHO05D004945 5.6e-200 702.6 780 52.9
ATR0564G248 Amborella trichopoda HOM05D004054 ORTHO05D004945 7.3e-200 702.2 800 51.1
HPP92_011033 Vanilla planifolia HOM05D004054 ORTHO05D004945 1.8e-198 697.6 778 51.8
Medtr5g038440 Medicago truncatula HOM05D004054 ORTHO05D004945 2.4e-198 697.2 767 53.3
A03p40440 Brassica napus HOM05D004054 ORTHO05D004945 3.2e-195 686.8 742 53.9
CDE09G0195 Ceratophyllum demersum HOM05D004054 ORTHO05D004945 3.2e-195 686.8 815 48.3
TPR.G13762 Trifolium pratense HOM05D004054 ORTHO05D004945 3.6e-191 673.3 794 50.9
Lalb_Chr17g0340361 Lupinus albus HOM05D004054 ORTHO05D004945 4.7e-191 672.9 709 55.3
BcaC01g03722 Brassica carinata HOM05D004054 ORTHO05D004945 1.5e-189 667.9 768 51.6
Hund05913 Selenicereus undatus HOM05D004054 ORTHO05D004945 1.2e-186 658.3 727 53.0
Cpa.g.sc5.276 Carica papaya HOM05D004054 ORTHO05D004945 2.7e-186 657.1 556 63.1
EL10Ac6g13147 Beta vulgaris HOM05D004054 ORTHO05D004945 4.6e-186 656.4 750 52.0
Lj2g0020807 Lotus japonicus HOM05D004054 ORTHO05D004945 3.9e-185 653.3 747 52.5
arahy.Tifrunner.gnm1.ann1.S53SYG Arachis hypogaea HOM05D004054 ORTHO05D004945 1.1e-179 635.2 757 48.5
unitig_22.g6528 Utricularia gibba HOM05D004054 ORTHO05D004945 3.1e-174 617.1 760 50.5
Zm00001eb409770 Zea mays HOM05D004054 ORTHO05D004945 4.5e-173 613.2 757 48.2
SEGI_39580 Sequoiadendron giganteum HOM05D004054 ORTHO05D004945 9.9e-173 612.1 808 45.3
arahy.Tifrunner.gnm1.ann1.B2D650 Arachis hypogaea HOM05D004054 ORTHO05D004945 1.4e-166 591.7 779 46.1
Gohir.A12G166800 Gossypium hirsutum HOM05D004054 ORTHO05D004945 4.5e-165 586.6 555 58.7
Lsat_1_v5_gn_4_9281 Lactuca sativa HOM05D004054 ORTHO05D004945 7.6e-165 585.9 789 47.7
ECA234G1496 Erigeron canadensis HOM05D004054 ORTHO05D004945 3.8e-156 557.0 787 46.0
HanXRQChr03g0092771 Helianthus annuus HOM05D004054 ORTHO05D004945 1.3e-151 542.0 758 44.3
VMungo1215G1372 Vigna mungo HOM05D004054 ORTHO05D004945 5.9e-149 533.1 913 39.4
Nn1g02896 Nelumbo nucifera HOM05D004054 ORTHO05D004945 3.8e-148 530.4 789 42.6
CiPaw.06G080700 Carya illinoinensis HOM05D004054 ORTHO05D004945 6.1e-146 523.1 444 64.4
CDE02G2379 Ceratophyllum demersum HOM05D004054 ORTHO05D004945 2.9e-140 504.2 728 42.6
Ah.03g132020 Amaranthus hybridus HOM05D004054 ORTHO05D004945 3.8e-140 503.8 498 56.0
unitig_8.g3947 Utricularia gibba HOM05D004054 ORTHO05D004945 6.8e-129 466.5 547 48.1
Phvul.002G066700 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 6.3e-127 459.9 479 55.3
Mapoly0224s0002 Marchantia polymorpha HOM05D004054 ORTHO05D004945 1.2e-125 455.7 807 37.7
Zm00001eb066230 Zea mays HOM05D004054 ORTHO05D004945 5.9e-125 453.4 624 46.0
Pp3c16_680 Physcomitrium patens HOM05D004054 ORTHO05D004945 3.9e-108 397.5 799 34.9
SMO119G0368 Selaginella moellendorffii HOM05D004054 ORTHO05D004945 6.0e-93 347.1 648 34.6
AagrBONN_evm.TU.Sc2ySwM_228.4114 Anthoceros agrestis HOM05D004054 ORTHO05D004945 9.2e-86 323.2 661 34.8
Psat0s2845g0120 Pisum sativum HOM05D004054 ORTHO05D004945 4.3e-83 314.3 459 45.3
CiPaw.06G080600 Carya illinoinensis HOM05D004054 ORTHO05D004945 3.4e-72 278.1 284 56.7
Potri.008G194566 Populus trichocarpa HOM05D004054 ORTHO05D004945 1.2e-69 269.6 246 61.8
Phvul.002G066500 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 2.1e-61 242.3 281 50.2
MSTRG.2359 Avicennia marina HOM05D004054 ORTHO05D004945 4.1e-49 201.4 168 68.5
Cpa.g.sc5.277 Carica papaya HOM05D004054 ORTHO05D004945 5.3e-49 201.1 235 51.5
Potri.008G194632 Populus trichocarpa HOM05D004054 ORTHO05D004945 1.9e-43 182.6 195 57.4
C02p33030 Brassica napus HOM05D004054 ORTHO05D004945 6.7e-36 157.5 184 51.6
Gohir.A12G166900 Gossypium hirsutum HOM05D004054 ORTHO05D004945 6.5e-31 141.0 153 51.6
C03p36410 Brassica napus HOM05D004054 ORTHO05D004945 4.2e-30 138.3 206 44.7
BolC3t15954H Brassica oleracea HOM05D004054 ORTHO05D004945 4.2e-30 138.3 206 44.7
RcHm_v2.0_Chr1g0331861 Rosa chinensis HOM05D004054 ORTHO05D004945 1.0e-28 133.7 138 55.1
A05p04500 Brassica napus HOM05D004054 ORTHO05D004945 8.2e-26 124.0 184 45.7
C03p62480 Brassica napus HOM05D004054 ORTHO05D004945 8.2e-26 124.0 184 45.7
CBR_g39858 Chara braunii HOM05D004054 ORTHO05D009492 1.0e-23 117.1 326 30.7
A01p41860 Brassica napus HOM05D004054 ORTHO05D004945 3.7e-18 98.6 105 55.2
PGSC0003DMG402017622 Solanum tuberosum HOM05D004054 ORTHO05D004945 4.1e-17 95.1 101 51.5
Lalb_Chr17g0340371 Lupinus albus HOM05D004054 ORTHO05D004945 5.3e-17 94.7 60 78.3
C06p17170 Brassica napus HOM05D004054 ORTHO05D004945 1.6e-16 93.2 178 38.8
BolC3t18505H Brassica oleracea HOM05D004054 ORTHO05D004945 2.9e-15 89.0 202 36.6
CAN.G793.43 Capsicum annuum HOM05D004054 ORTHO05D004945 3.8e-15 88.6 182 39.0
unitig_8.g3946 Utricularia gibba HOM05D004054 ORTHO05D004945 5.0e-15 88.2 97 43.3
BcaC08g44394 Brassica carinata HOM05D004054 ORTHO05D004945 1.4e-12 80.1 163 35.6
C08p43480 Brassica napus HOM05D004054 ORTHO05D004945 1.4e-12 80.1 123 44.7
Lsat_1_v5_gn_3_52120 Lactuca sativa HOM05D004054 ORTHO05D004945 1.3e-10 73.6 58 55.2
A06p30220 Brassica napus HOM05D003604 ORTHO05D004110 1.8e-09 69.7 48 70.8
Lsat_1_v5_gn_5_60100 Lactuca sativa HOM05D004054 ORTHO05D036438 2.4e-09 69.3 85 52.9
Lsat_1_v5_gn_7_73540 Lactuca sativa HOM05D004054 ORTHO05D004945 4.1e-09 68.6 53 54.7
CBR_g39856 Chara braunii HOM05D000019 ORTHO05D000353 1.6e-08 66.6 234 26.1
C06p10280 Brassica napus HOM05D011797 ORTHO05D012335 6.5e-07 61.2 37 81.1
CBR_g39853 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-06 60.1 57 52.6
Dinv34201 Davidia involucrata HOM05D004054 ORTHO05D004945 5.5e-06 58.2 60 55.0


User provided reference genes

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