Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 2.8e-135 485.3 251 100.0
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 1.0e-113 413.7 249 82.3
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 1.4e-110 403.3 249 79.1
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 4.4e-109 398.3 243 80.7
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 1.7e-108 396.4 245 81.2
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 2.9e-108 395.6 248 78.2
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 6.4e-108 394.4 248 77.4
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 1.1e-107 393.7 247 79.4
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 1.1e-107 393.7 251 78.1
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 1.1e-107 393.7 248 77.8
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 1.4e-107 393.3 248 79.0
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 1.4e-107 393.3 248 77.4
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 1.4e-107 393.3 249 77.5
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 2.4e-107 392.5 249 77.1
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 3.2e-107 392.1 249 77.9
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 4.1e-107 391.7 248 77.4
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 7.1e-107 391.0 248 78.6
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 1.6e-106 389.8 248 78.2
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 1.6e-106 389.8 248 78.2
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.7e-106 389.0 241 78.4
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 7.8e-106 387.5 249 79.9
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 1.7e-105 386.3 241 78.0
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 2.3e-105 386.0 246 78.9
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 3.0e-105 385.6 248 76.6
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 5.1e-105 384.8 249 76.3
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 5.1e-105 384.8 249 75.1
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 8.6e-105 384.0 239 78.7
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 8.6e-105 384.0 241 77.6
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 1.5e-104 383.3 247 76.9
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 3.3e-104 382.1 248 77.0
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 5.6e-104 381.3 241 77.6
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 7.3e-104 380.9 245 75.5
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 9.6e-104 380.6 245 77.1
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 1.2e-103 380.2 244 76.2
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 1.6e-103 379.8 245 75.1
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 2.1e-103 379.4 249 74.7
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 2.1e-103 379.4 249 74.7
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 2.1e-103 379.4 249 74.7
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 2.1e-103 379.4 245 77.1
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 2.1e-103 379.4 257 75.5
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 2.8e-103 379.0 246 77.2
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 4.7e-103 378.3 249 73.5
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 6.2e-103 377.9 249 74.3
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 6.2e-103 377.9 249 73.1
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 8.1e-103 377.5 247 75.3
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 8.1e-103 377.5 246 77.2
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 8.1e-103 377.5 245 75.5
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 8.1e-103 377.5 249 74.3
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 1.8e-102 376.3 247 74.9
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 1.8e-102 376.3 249 74.3
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 1.8e-102 376.3 252 75.0
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 3.1e-102 375.6 241 76.3
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 4.0e-102 375.2 239 75.7
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 4.0e-102 375.2 239 75.7
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 4.0e-102 375.2 249 72.3
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 4.0e-102 375.2 249 75.1
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 8.9e-102 374.0 247 74.5
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 8.9e-102 374.0 241 76.3
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 1.2e-101 373.6 247 73.3
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 3.4e-101 372.1 249 74.7
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 4.4e-101 371.7 239 74.5
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 9.9e-101 370.5 241 75.5
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 1.7e-100 369.8 241 74.7
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 2.9e-100 369.0 249 72.7
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 3.8e-100 368.6 247 73.3
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 6.4e-100 367.9 241 74.3
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 1.4e-99 366.7 249 72.3
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 3.2e-99 365.5 246 74.8
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 9.3e-99 364.0 245 71.8
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 6.0e-98 361.3 245 74.7
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 1.3e-97 360.1 241 74.3
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 1.7e-97 359.8 249 70.7
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 1.7e-97 359.8 264 68.9
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 4.3e-96 355.1 246 69.9
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 4.0e-94 348.6 234 73.5
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 6.4e-92 341.3 245 69.4
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 1.1e-91 340.5 246 69.1
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 1.4e-91 340.1 248 70.2
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.6e-90 336.7 245 67.3
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 2.1e-90 336.3 245 67.3
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 1.3e-89 333.6 250 67.6
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 3.0e-89 332.4 210 79.0
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 8.7e-89 330.9 223 75.8
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 8.7e-89 330.9 208 79.8
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 8.7e-89 330.9 249 65.1
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 2.8e-87 325.9 203 79.3
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 1.8e-86 323.2 249 63.5
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 1.5e-85 320.1 213 76.1
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 2.0e-85 319.7 245 64.5
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 1.6e-82 310.1 245 66.1
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 6.0e-82 308.1 184 85.3
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 6.7e-81 304.7 198 72.2
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 3.7e-79 298.9 249 63.9
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 9.0e-78 294.3 202 73.8
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 6.5e-76 288.1 245 63.7
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 1.1e-75 287.3 196 68.9
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 5.5e-75 285.0 239 63.6
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 7.1e-75 284.6 256 64.5
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 2.2e-68 263.1 241 53.9
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 1.9e-67 260.0 241 52.3
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 4.2e-67 258.8 238 55.5
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.4e-62 243.8 239 52.7
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 8.5e-60 234.6 158 71.5
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 2.5e-59 233.0 236 47.9
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 1.3e-55 220.7 202 61.9
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 1.6e-50 203.8 159 60.4
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 6.7e-49 198.4 121 81.0
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 9.7e-48 194.5 151 63.6
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 9.7e-48 194.5 117 79.5
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 1.7e-47 193.7 162 61.1
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 4.8e-47 192.2 151 62.9
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 4.8e-47 192.2 151 62.9
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 2.9e-36 156.4 231 40.7
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 3.2e-35 152.9 119 66.4
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 1.2e-32 144.4 102 69.6
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 3.4e-32 142.9 91 75.8
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 2.7e-29 133.3 95 68.4
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 1.4e-17 94.4 71 63.4
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 8.9e-17 91.7 123 49.6
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 8.9e-09 65.1 38 94.7
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 9.8e-08 61.6 38 68.4


User provided reference genes

Program Settings