Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011631.2 Olea europaea HOM05D001656 ORTHO05D005043 1.1e-142 510.0 254 100.0
Oeu034830.1 Olea europaea HOM05D001656 ORTHO05D005043 9.6e-120 433.7 238 90.8
Oeu046408.1 Olea europaea HOM05D001656 ORTHO05D005043 1.4e-118 429.9 238 90.8
Dinv22032 Davidia involucrata HOM05D001656 ORTHO05D005043 1.1e-112 410.2 238 85.3
Migut.C00423 Erythranthe guttata HOM05D001656 ORTHO05D005043 4.5e-109 398.3 239 83.3
SalBow7G3472 Salvia bowleyana HOM05D001656 ORTHO05D005043 1.7e-108 396.4 238 83.2
Lj4A79T57 Lonicera japonica HOM05D001656 ORTHO05D005043 3.8e-108 395.2 238 82.8
Actinidia10250 Actinidia chinensis HOM05D001656 ORTHO05D005043 1.4e-107 393.3 238 83.6
CAN.G1801.4 Capsicum annuum HOM05D001656 ORTHO05D005043 1.9e-107 392.9 238 81.5
Lsat_1_v5_gn_2_121140 Lactuca sativa HOM05D001656 ORTHO05D005043 7.2e-107 391.0 239 81.6
Lj4C747T6 Lonicera japonica HOM05D001656 ORTHO05D005043 1.6e-106 389.8 238 81.1
Nitab4.5_0003791g0030 Nicotiana tabacum HOM05D001656 ORTHO05D005043 2.7e-106 389.0 239 81.6
Nitab4.5_0006011g0010 Nicotiana tabacum HOM05D001656 ORTHO05D005043 2.7e-106 389.0 239 81.6
Nn5g30719 Nelumbo nucifera HOM05D001656 ORTHO05D005043 6.1e-106 387.9 238 81.9
GSVIVG01009259001 Vitis vinifera HOM05D001656 ORTHO05D005043 6.1e-106 387.9 238 79.8
MSTRG.915 Avicennia marina HOM05D001656 ORTHO05D005043 1.0e-105 387.1 239 80.8
CANSAT25G3831 Cannabis sativa HOM05D001656 ORTHO05D005043 1.0e-105 387.1 238 80.3
Nn6g32050 Nelumbo nucifera HOM05D001656 ORTHO05D005043 1.8e-105 386.3 238 81.5
Sopen00g004570 Solanum pennellii HOM05D001656 ORTHO05D005043 3.0e-105 385.6 239 81.2
FvH4_5g33550 Fragaria vesca HOM05D001656 ORTHO05D005043 3.9e-105 385.2 238 79.0
ECA247G3818 Erigeron canadensis HOM05D001656 ORTHO05D005043 5.1e-105 384.8 239 81.6
Actinidia19273 Actinidia chinensis HOM05D001656 ORTHO05D005043 6.7e-105 384.4 238 81.9
Solyc04g077040.3 Solanum lycopersicum HOM05D001656 ORTHO05D005043 6.7e-105 384.4 239 80.8
Atru.chr13.919 Acer truncatum HOM05D001656 ORTHO05D005043 8.7e-105 384.0 238 79.8
Medtr3g110710 Medicago truncatula HOM05D001656 ORTHO05D005043 8.7e-105 384.0 238 77.7
vmacro21383 Vaccinium macrocarpon HOM05D001656 ORTHO05D005043 1.9e-104 382.9 238 80.7
Duzib041G0753 Durio zibethinus HOM05D001656 ORTHO05D005043 2.5e-104 382.5 238 81.1
Gohir.D05G217900 Gossypium hirsutum HOM05D001656 ORTHO05D005043 2.5e-104 382.5 238 80.7
ClCG08G008920 Citrullus lanatus HOM05D001656 ORTHO05D005043 3.3e-104 382.1 238 79.8
DCAR_020038 Daucus carota HOM05D001656 ORTHO05D005043 5.7e-104 381.3 238 80.7
COL.COLO4_35356 Corchorus olitorius HOM05D001656 ORTHO05D005043 7.4e-104 380.9 238 79.4
Nitab4.5_0010814g0010 Nicotiana tabacum HOM05D001656 ORTHO05D005043 7.4e-104 380.9 238 77.7
PGSC0003DMG400004938 Solanum tuberosum HOM05D001656 ORTHO05D005043 9.7e-104 380.6 239 80.3
Lalb_Chr11g0064681 Lupinus albus HOM05D001656 ORTHO05D005043 1.3e-103 380.2 238 77.3
QL12p040536 Quercus lobata HOM05D001656 ORTHO05D005043 1.3e-103 380.2 238 79.8
MELO3C019781.2 Cucumis melo HOM05D001656 ORTHO05D005043 1.6e-103 379.8 238 79.4
Sed0025136 Sechium edule HOM05D001656 ORTHO05D005043 1.6e-103 379.8 239 79.1
Gohir.A05G214600 Gossypium hirsutum HOM05D001656 ORTHO05D005043 3.7e-103 378.6 238 79.8
Gorai.009G224700 Gossypium raimondii HOM05D001656 ORTHO05D005043 3.7e-103 378.6 238 79.8
RcHm_v2.0_Chr7g0232371 Rosa chinensis HOM05D001656 ORTHO05D005043 3.7e-103 378.6 238 78.2
arahy.Tifrunner.gnm1.ann1.AQ9I9J Arachis hypogaea HOM05D001656 ORTHO05D005043 4.8e-103 378.3 239 77.4
Nitab4.5_0003791g0040 Nicotiana tabacum HOM05D001656 ORTHO05D005043 6.3e-103 377.9 238 76.9
Thecc.08G080000 Theobroma cacao HOM05D001656 ORTHO05D005043 1.1e-102 377.1 238 78.2
arahy.Tifrunner.gnm1.ann1.UN376R Arachis hypogaea HOM05D001656 ORTHO05D005043 1.8e-102 376.3 239 77.0
Manes.18G053600 Manihot esculenta HOM05D001656 ORTHO05D005043 2.4e-102 375.9 238 77.7
EL10Ac1g02313 Beta vulgaris HOM05D001656 ORTHO05D005043 3.1e-102 375.6 238 78.6
MD08G1210700 Malus domestica HOM05D001656 ORTHO05D005043 3.1e-102 375.6 238 75.6
Glyma.04G088400 Glycine max HOM05D001656 ORTHO05D005043 6.9e-102 374.4 238 75.2
MD15G1398600 Malus domestica HOM05D001656 ORTHO05D005043 6.9e-102 374.4 238 76.9
Solyc04g077030.3 Solanum lycopersicum HOM05D001656 ORTHO05D005043 9.0e-102 374.0 238 76.5
FvH4_5g33570 Fragaria vesca HOM05D001656 ORTHO05D005043 1.2e-101 373.6 238 76.1
Rhsim06G0067500 Rhododendron simsii HOM05D001656 ORTHO05D005043 1.2e-101 373.6 238 79.4
MSTRG.914 Avicennia marina HOM05D001656 ORTHO05D005043 2.0e-101 372.9 238 76.5
Cpa.g.sc160.9 Carica papaya HOM05D001656 ORTHO05D005043 2.6e-101 372.5 238 76.9
Ciclev10000739m.g Citrus clementina HOM05D001656 ORTHO05D005043 2.6e-101 372.5 238 79.0
Haze_19016 Corylus avellana HOM05D001656 ORTHO05D005043 2.6e-101 372.5 236 78.4
Eucgr.F00471 Eucalyptus grandis HOM05D001656 ORTHO05D005043 2.6e-101 372.5 238 77.7
Cfa020711 Carpinus fangiana HOM05D001656 ORTHO05D005043 3.4e-101 372.1 236 78.8
CsaV3_6G036230 Cucumis sativus L. HOM05D001656 ORTHO05D005043 3.4e-101 372.1 238 77.7
Hund05241 Selenicereus undatus HOM05D001656 ORTHO05D005043 3.4e-101 372.1 238 77.7
TWI36G0349 Tripterygium wilfordii HOM05D001656 ORTHO05D005043 3.4e-101 372.1 238 77.7
TAR381G0234 Trochodendron aralioides HOM05D001656 ORTHO05D005043 3.4e-101 372.1 238 77.7
Psat5g091440 Pisum sativum HOM05D001656 ORTHO05D005043 4.5e-101 371.7 238 75.6
Cc10_g08000 Coffea canephora HOM05D001656 ORTHO05D005043 7.7e-101 370.9 238 76.9
RcHm_v2.0_Chr7g0232391 Rosa chinensis HOM05D001656 ORTHO05D005043 1.0e-100 370.5 238 76.1
Sc26g0004310 Simmondsia chinensis HOM05D001656 ORTHO05D005043 1.3e-100 370.2 239 77.0
TWI56G0239 Tripterygium wilfordii HOM05D001656 ORTHO05D005043 1.3e-100 370.2 238 76.5
CAN.G1801.5 Capsicum annuum HOM05D001656 ORTHO05D005043 2.2e-100 369.4 238 74.8
Prupe.1G542700 Prunus persica HOM05D001656 ORTHO05D005043 2.2e-100 369.4 238 75.6
MBI16_g26737_MAGBIO Magnolia biondii HOM05D001656 ORTHO05D005043 6.5e-100 367.9 236 77.1
Cc10_g08010 Coffea canephora HOM05D001656 ORTHO05D005043 8.5e-100 367.5 238 73.5
TPR.G12406 Trifolium pratense HOM05D001656 ORTHO05D005043 1.1e-99 367.1 239 74.9
Potri.019G077600 Populus trichocarpa HOM05D001656 ORTHO05D005043 2.5e-99 365.9 235 77.9
AUR62034954 Chenopodium quinoa HOM05D001656 ORTHO05D005043 5.5e-99 364.8 238 76.9
Ca_15555_v3 Cicer arietinum L. HOM05D001656 ORTHO05D005043 7.2e-99 364.4 238 73.9
PSO447G0306 Papaver somniferum HOM05D001656 ORTHO05D005043 9.4e-99 364.0 238 76.1
PGR083G1861 Punica granatum HOM05D001656 ORTHO05D005043 9.4e-99 364.0 238 75.6
AUR62035764 Chenopodium quinoa HOM05D001656 ORTHO05D005043 1.2e-98 363.6 238 76.5
THA.LOC104799841 Tarenaya hassleriana HOM05D001656 ORTHO05D005043 1.2e-98 363.6 238 76.1
MBI16_g05037_MAGBIO Magnolia biondii HOM05D001656 ORTHO05D005043 2.7e-98 362.5 236 76.3
Aqoxy5G02659 Aquilegia oxysepala HOM05D001656 ORTHO05D005043 4.6e-98 361.7 237 74.7
CiPaw.15G153300 Carya illinoinensis HOM05D001656 ORTHO05D005043 6.1e-98 361.3 236 75.0
Ah.11g038980 Amaranthus hybridus HOM05D001656 ORTHO05D005043 1.0e-97 360.5 238 74.4
Lj1g0025512 Lotus japonicus HOM05D001656 ORTHO05D005043 1.0e-97 360.5 238 73.9
Phvul.009G114000 Phaseolus vulgaris HOM05D001656 ORTHO05D005043 1.0e-97 360.5 238 73.1
Duzib093G1672 Durio zibethinus HOM05D001656 ORTHO05D005043 1.8e-97 359.8 228 78.1
Sabra19G0088700 Salix brachista HOM05D001656 ORTHO05D005043 1.8e-97 359.8 235 76.2
VMungo1309G0971 Vigna mungo HOM05D001656 ORTHO05D005043 3.0e-97 359.0 238 72.7
Hma1.2p1_1078F.1_g254805 Hydrangea macrophylla HOM05D001656 ORTHO05D005043 3.9e-97 358.6 238 74.4
DCAR_009544 Daucus carota HOM05D001656 ORTHO05D005043 8.8e-97 357.5 239 74.5
Oeu035948.1 Olea europaea HOM05D001656 ORTHO05D005043 2.5e-96 355.9 238 75.2
SpUn0011_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 7.4e-96 354.4 238 73.1
SpUn0057_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 7.4e-96 354.4 238 73.1
SpUn0078_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 7.4e-96 354.4 238 73.1
SpUn0134_0020 Schrenkiella parvula HOM05D001656 ORTHO05D005043 7.4e-96 354.4 238 73.1
Carub.0008s0951 Capsella rubella HOM05D001656 ORTHO05D005043 1.3e-95 353.6 238 73.9
AL8G23490 Arabidopsis lyrata HOM05D001656 ORTHO05D005043 2.2e-95 352.8 238 73.9
FAN18G2419 Fragaria x ananassa HOM05D001656 ORTHO05D003489 2.2e-95 352.8 224 77.2
FAN08G0520 Fragaria x ananassa HOM05D001656 ORTHO05D003489 3.7e-95 352.1 224 76.8
AT5G49650 Arabidopsis thaliana HOM05D001656 ORTHO05D005043 4.8e-95 351.7 238 73.1
Aa31LG3G8940 Aethionema arabicum HOM05D001656 ORTHO05D005043 6.3e-95 351.3 238 73.5
Thhalv10013140m.g Eutrema salsugineum HOM05D001656 ORTHO05D005043 1.1e-94 350.5 238 72.3
HanXRQChr02g0046991 Helianthus annuus HOM05D001656 ORTHO05D005043 3.1e-94 349.0 219 79.9
BcaC01g01862 Brassica carinata HOM05D001656 ORTHO05D005043 5.3e-94 348.2 238 72.3
SGA_v2.0_scaffold14G07067 Striga asiatica HOM05D001656 ORTHO05D005043 6.9e-94 347.8 219 77.6
HPP92_019867 Vanilla planifolia HOM05D001656 ORTHO05D005043 6.9e-94 347.8 237 73.0
ATR0315G023 Amborella trichopoda HOM05D001656 ORTHO05D005043 9.1e-94 347.4 233 72.5
A06p20550 Brassica napus HOM05D001656 ORTHO05D005043 9.1e-94 347.4 238 72.3
Sopen00g003720 Solanum pennellii HOM05D001656 ORTHO05D005043 1.2e-93 347.1 223 76.2
ECA232G0787 Erigeron canadensis HOM05D001656 ORTHO05D005043 1.5e-93 346.7 239 72.8
C03p71250 Brassica napus HOM05D001656 ORTHO05D005043 3.4e-93 345.5 238 71.8
BcaB01g00958 Brassica carinata HOM05D001656 ORTHO05D005043 1.0e-92 344.0 239 72.4
BolC3t19406H Brassica oleracea HOM05D001656 ORTHO05D005043 1.3e-92 343.6 238 71.4
Sc08g0003410 Simmondsia chinensis HOM05D001656 ORTHO05D005043 2.9e-92 342.4 238 71.4
CDE02G2348 Ceratophyllum demersum HOM05D001656 ORTHO05D005043 2.5e-91 339.3 233 71.7
FAN18G4580 Fragaria x ananassa HOM05D001656 ORTHO05D005043 3.2e-91 339.0 218 75.2
RcHm_v2.0_Chr7g0232401 Rosa chinensis HOM05D001656 ORTHO05D005043 1.6e-90 336.7 215 78.1
Zm00001eb109880 Zea mays HOM05D001656 ORTHO05D005043 2.1e-90 336.3 234 72.2
AUR62034953 Chenopodium quinoa HOM05D001656 ORTHO05D005043 2.7e-90 335.9 238 68.9
Hund05240 Selenicereus undatus HOM05D001656 ORTHO05D005043 6.1e-90 334.7 234 70.1
Os07g0640200 Oryza sativa ssp. japonica HOM05D001656 ORTHO05D005043 3.0e-89 332.4 234 70.1
SEGI_21864 Sequoiadendron giganteum HOM05D001656 ORTHO05D005043 2.8e-87 325.9 235 68.9
Peaxi162Scf01174g00119 Petunia axillaris HOM05D001656 ORTHO05D005043 4.8e-87 325.1 195 83.6
EL10Ac1g02312 Beta vulgaris HOM05D001656 ORTHO05D005043 7.7e-85 317.8 229 66.8
Pp3c13_15890 Physcomitrium patens HOM05D001656 ORTHO05D005043 2.7e-82 309.3 235 63.0
Mapoly0152s0012 Marchantia polymorpha HOM05D001656 ORTHO05D005043 4.1e-78 295.4 230 63.9
Dinv44906 Davidia involucrata HOM05D001656 ORTHO05D005043 3.2e-75 285.8 169 84.0
Os12g0633000 Oryza sativa ssp. japonica HOM05D001656 ORTHO05D005043 5.5e-75 285.0 239 60.7
Pp3c4_10480 Physcomitrium patens HOM05D001656 ORTHO05D005043 1.6e-74 283.5 229 58.5
SMO339G0045 Selaginella moellendorffii HOM05D001656 ORTHO05D005043 6.3e-71 271.6 231 60.2
CBR_g40751 Chara braunii HOM05D001656 ORTHO05D005043 2.2e-68 263.1 236 55.5
Manes.05G186400 Manihot esculenta HOM05D001656 ORTHO05D005043 7.2e-67 258.1 169 74.6
PSO210G2052 Papaver somniferum HOM05D001656 ORTHO05D005043 1.0e-65 254.2 169 75.1
FAN08G2664 Fragaria x ananassa HOM05D001656 ORTHO05D005043 1.8e-65 253.4 238 56.7
AagrBONN_evm.TU.Sc2ySwM_228.1076 Anthoceros agrestis HOM05D001656 ORTHO05D005043 3.6e-58 229.2 233 50.6
unitig_736.g22950 Utricularia gibba HOM05D001656 ORTHO05D005043 9.2e-54 214.5 140 77.9
Atru.chr7.541 Acer truncatum HOM05D001656 ORTHO05D005043 3.9e-52 209.1 202 56.9
Pp3c4_10497 Physcomitrium patens HOM05D001656 ORTHO05D005043 1.2e-50 204.1 165 58.8
Dinv26408 Davidia involucrata HOM05D001656 ORTHO05D005043 1.6e-37 160.6 98 77.6
Dinv14696 Davidia involucrata HOM05D001656 ORTHO05D005043 3.9e-36 156.0 100 75.0
Gohir.D06G145701 Gossypium hirsutum HOM05D001656 ORTHO05D005043 9.5e-35 151.4 98 73.5
Gorai.010G172000 Gossypium raimondii HOM05D001656 ORTHO05D005043 8.1e-34 148.3 98 72.4
Gorai.010G169800 Gossypium raimondii HOM05D001656 ORTHO05D005043 1.4e-33 147.5 98 72.4
Gorai.013G041400 Gossypium raimondii HOM05D001656 ORTHO05D005043 3.1e-33 146.4 98 73.5
Gohir.D13G037000 Gossypium hirsutum HOM05D001656 ORTHO05D005043 4.0e-33 146.0 98 73.5
Atru.chr13.2595 Acer truncatum HOM05D001656 ORTHO05D005043 3.1e-25 119.8 106 59.4
Glyma.06G090401 Glycine max HOM05D001656 ORTHO05D005043 1.3e-18 97.8 68 69.1
Gorai.004G152700 Gossypium raimondii HOM05D001656 ORTHO05D005043 4.2e-06 56.2 36 66.7
Gohir.D08G147150 Gossypium hirsutum HOM05D001656 ORTHO05D005043 5.5e-06 55.8 36 66.7


User provided reference genes

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