Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 5.5e-125 451.1 240 100.0
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 1.0e-70 270.8 258 57.0
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 1.1e-69 267.3 217 60.4
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 2.6e-66 256.1 220 55.9
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 1.4e-64 250.4 239 54.0
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 1.9e-61 240.0 202 57.4
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 2.4e-59 233.0 223 52.0
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 1.1e-56 224.2 222 48.6
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 4.2e-56 222.2 242 46.3
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 7.1e-56 221.5 216 51.9
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 1.2e-55 220.7 238 47.1
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 2.1e-55 219.9 241 48.1
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 7.8e-55 218.0 241 46.9
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 6.6e-54 214.9 246 45.5
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 5.6e-53 211.8 246 45.5
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 2.1e-52 209.9 225 47.6
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 2.8e-52 209.5 222 48.2
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 3.6e-52 209.1 246 47.2
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 4.8e-52 208.8 218 48.2
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 3.1e-51 206.1 218 46.8
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 4.0e-51 205.7 218 46.3
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 1.2e-50 204.1 246 47.2
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 1.5e-50 203.8 252 46.4
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 2.2e-49 199.9 242 45.5
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 2.4e-48 196.4 268 41.0
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 5.4e-48 195.3 215 46.5
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 7.1e-48 194.9 250 44.0
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 9.3e-48 194.5 241 43.6
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 7.9e-47 191.4 229 42.8
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.3e-46 189.9 250 43.2
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 3.0e-46 189.5 245 42.4
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 3.0e-46 189.5 231 45.0
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 6.7e-46 188.3 242 40.9
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 8.7e-46 188.0 217 43.3
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 1.1e-45 187.6 250 42.8
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.1e-45 187.6 250 42.8
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 4.3e-45 185.7 228 42.5
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 4.3e-45 185.7 227 42.7
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 5.6e-45 185.3 220 48.2
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 1.3e-44 184.1 226 43.4
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 1.6e-44 183.7 226 43.4
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 6.2e-44 181.8 246 39.0
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 1.1e-43 181.0 242 39.7
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 1.1e-43 181.0 160 50.6
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 1.8e-43 180.3 248 38.3
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 1.8e-43 180.3 235 40.9
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.8e-43 180.3 223 43.9
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 1.8e-43 180.3 233 42.9
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 3.1e-43 179.5 226 42.5
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 2.0e-42 176.8 174 52.3
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 5.8e-42 175.3 205 46.3
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 5.8e-42 175.3 246 38.6
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 3.8e-41 172.6 220 39.1
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 4.9e-41 172.2 219 42.0
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 1.4e-40 170.6 263 36.1
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 2.4e-40 169.9 232 40.5
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 4.2e-40 169.1 240 40.0
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 5.5e-40 168.7 217 43.8
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 7.9e-39 164.9 220 40.0
Solyc06g054140.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 1.3e-38 164.1 180 50.0
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 1.1e-37 161.0 227 36.6
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 1.9e-37 160.2 249 39.4
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 1.9e-37 160.2 235 37.0
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 1.2e-34 151.0 238 37.0
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 2.6e-34 149.8 169 47.3
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 3.4e-34 149.4 235 35.3
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 4.9e-33 145.6 228 36.4
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 4.6e-31 139.0 231 35.5
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 6.0e-31 138.7 231 36.4
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 1.0e-30 137.9 243 34.2
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 2.3e-30 136.7 186 41.4
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 5.1e-30 135.6 172 43.6
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.6e-28 130.6 191 40.8
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 6.3e-28 128.6 219 33.3
PSO210G0191 Papaver somniferum HOM05D007633 ORTHO05D008817 1.4e-27 127.5 221 33.5
PSO761G0330 Papaver somniferum HOM05D007633 ORTHO05D008817 1.4e-27 127.5 205 36.1
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 9.0e-27 124.8 150 42.0
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 1.2e-26 124.4 239 34.3
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 1.2e-26 124.4 227 31.7
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 3.2e-24 116.3 135 43.0
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 9.3e-24 114.8 209 33.5
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 1.8e-22 110.5 180 35.6
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 3.0e-22 109.8 243 29.6
PGSC0003DMG400016306 Solanum tuberosum HOM05D007633 ORTHO05D008817 4.3e-21 105.9 103 53.4
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 1.2e-18 97.8 146 37.0
AT1G05430 Arabidopsis thaliana HOM05D012198 ORTHO05D008817 4.5e-18 95.9 240 30.8
arahy.Tifrunner.gnm1.ann1.5LNY8Z Arachis hypogaea HOM05D007633 ORTHO05D008817 1.7e-17 94.0 159 35.2
THA.LOC104826165 Tarenaya hassleriana HOM05D012198 ORTHO05D008817 2.2e-17 93.6 238 29.8
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 3.8e-17 92.8 231 30.3
arahy.Tifrunner.gnm1.ann1.VQRK5I Arachis hypogaea HOM05D007633 ORTHO05D008817 1.1e-16 91.3 158 34.2
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 2.5e-16 90.1 246 31.7
MD13G1194600 Malus domestica HOM05D007633 ORTHO05D008817 5.5e-16 89.0 131 39.7
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 6.1e-15 85.5 227 30.4
CARHR205340 Cardamine hirsuta HOM05D012198 ORTHO05D008817 1.4e-14 84.3 204 28.9
BcaB02g06861 Brassica carinata HOM05D012198 ORTHO05D008817 3.9e-14 82.8 211 27.5
Thhalv10008449m.g Eutrema salsugineum HOM05D012198 ORTHO05D008817 5.7e-13 79.0 217 28.6
BcaC05g24387 Brassica carinata HOM05D012198 ORTHO05D008817 3.7e-12 76.3 176 27.3
C05p03770 Brassica napus HOM05D012198 ORTHO05D008817 3.7e-12 76.3 180 28.9
BolC5t29154H Brassica oleracea HOM05D012198 ORTHO05D008817 3.7e-12 76.3 180 28.9
Os10g0430800 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 4.8e-12 75.9 226 27.4
A10p04130 Brassica napus HOM05D012198 ORTHO05D008817 8.2e-12 75.1 216 27.8
BraA10t42683Z Brassica rapa HOM05D012198 ORTHO05D008817 8.2e-12 75.1 216 27.8
Sp1g04300 Schrenkiella parvula HOM05D012198 ORTHO05D008817 1.4e-11 74.3 215 24.7
EL10Ac3g06495 Beta vulgaris HOM05D007633 ORTHO05D008817 2.4e-11 73.6 224 27.2
AUR62043551 Chenopodium quinoa HOM05D007633 ORTHO05D008817 3.1e-11 73.2 169 28.4
BcaC05g24389 Brassica carinata HOM05D012198 ORTHO05D008817 4.1e-11 72.8 132 29.5
Zm00001eb222870 Zea mays HOM05D026697 ORTHO05D008817 1.3e-09 67.8 161 30.4
Os10g0430700 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 6.5e-09 65.5 217 23.5
DCAR_030642 Daucus carota HOM05D007633 ORTHO05D008817 1.4e-08 64.3 108 36.1
MD07G1251800 Malus domestica HOM05D007633 ORTHO05D008817 6.1e-07 58.9 74 41.9
Cpa.g.sc58.92 Carica papaya HOM05D000003 ORTHO05D000004 1.4e-06 57.8 53 52.8
Lalb_Chr01g0013111 Lupinus albus HOM05D007633 ORTHO05D008817 1.8e-06 57.4 65 46.2
MD13G1194800 Malus domestica HOM05D007633 ORTHO05D008817 6.7e-06 55.5 50 52.0
Sabra08G0117600 Salix brachista HOM05D007633 ORTHO05D008817 6.7e-06 55.5 41 63.4
Cpa.g.sc58.94 Carica papaya HOM05D007633 ORTHO05D008817 8.8e-06 55.1 75 34.7


User provided reference genes

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