Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011491.2 Olea europaea HOM05D002335 ORTHO05D006282 1.0e-38 162.9 83 100.0
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 1.6e-23 112.5 78 73.1
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 2.1e-23 112.1 78 75.6
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 3.6e-23 111.3 78 71.8
Nitab4.5_0000343g0220 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.0e-22 109.8 78 71.8
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 1.8e-22 109.0 78 73.1
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 5.2e-22 107.5 78 70.5
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 6.7e-22 107.1 78 74.4
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 6.7e-22 107.1 78 67.9
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 1.1e-21 106.3 78 66.7
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 1.5e-21 105.9 78 66.7
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 2.0e-21 105.5 78 69.2
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 2.0e-21 105.5 78 69.2
Actinidia38482 Actinidia chinensis HOM05D002335 ORTHO05D006282 2.6e-21 105.1 78 67.9
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 2.6e-21 105.1 78 65.4
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 2.6e-21 105.1 78 70.5
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 3.3e-21 104.8 78 66.7
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 3.3e-21 104.8 78 67.9
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 4.4e-21 104.4 78 69.2
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 4.4e-21 104.4 78 66.7
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 9.7e-21 103.2 78 66.7
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 9.7e-21 103.2 76 69.7
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 9.7e-21 103.2 78 67.9
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 1.3e-20 102.8 78 64.1
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 2.8e-20 101.7 78 65.4
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 2.8e-20 101.7 78 64.1
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 2.8e-20 101.7 78 64.1
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 2.8e-20 101.7 78 64.1
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 3.7e-20 101.3 78 66.7
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 4.8e-20 100.9 78 62.8
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 6.3e-20 100.5 78 62.8
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 6.3e-20 100.5 78 69.2
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 8.2e-20 100.1 78 64.1
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 1.8e-19 99.0 78 62.8
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 2.4e-19 98.6 73 64.4
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 2.4e-19 98.6 78 61.5
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 3.1e-19 98.2 78 64.1
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 3.1e-19 98.2 78 66.7
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 4.1e-19 97.8 78 62.8
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 5.3e-19 97.4 78 62.8
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 5.3e-19 97.4 78 62.8
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 7.0e-19 97.1 78 65.4
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 9.1e-19 96.7 78 61.5
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 1.2e-18 96.3 78 60.3
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 1.6e-18 95.9 78 64.1
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 1.6e-18 95.9 78 65.4
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 2.0e-18 95.5 78 64.1
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 3.5e-18 94.7 78 60.3
Lalb_Chr07g0181191 Lupinus albus HOM05D002335 ORTHO05D006282 7.7e-18 93.6 78 59.0
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 7.7e-18 93.6 78 64.1
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 1.0e-17 93.2 78 64.1
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 1.0e-17 93.2 78 61.5
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 1.0e-17 93.2 78 64.1
Lalb_Chr23g0276371 Lupinus albus HOM05D002335 ORTHO05D006282 1.0e-17 93.2 83 59.0
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 2.9e-17 91.7 78 65.4
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 2.9e-17 91.7 78 61.5
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 3.8e-17 91.3 78 61.5
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 6.5e-17 90.5 78 59.0
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 6.5e-17 90.5 78 60.3
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea HOM05D002335 ORTHO05D006282 1.5e-16 89.4 102 48.0
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 1.9e-16 89.0 75 65.3
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 3.2e-16 88.2 78 60.3
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 3.2e-16 88.2 78 60.3
MD02G1091600 Malus domestica HOM05D002335 ORTHO05D006282 4.2e-16 87.8 78 62.8
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 5.5e-16 87.4 78 57.7
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 5.5e-16 87.4 78 57.7
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 5.5e-16 87.4 78 57.7
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 5.5e-16 87.4 78 57.7
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 5.5e-16 87.4 78 57.7
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 5.5e-16 87.4 78 57.7
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 7.2e-16 87.0 78 56.4
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 9.4e-16 86.7 76 57.9
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 9.4e-16 86.7 78 57.7
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 2.1e-15 85.5 78 59.0
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 2.7e-15 85.1 76 57.9
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 3.6e-15 84.7 78 57.7
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 3.6e-15 84.7 78 61.5
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 4.7e-15 84.3 78 59.0
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 4.7e-15 84.3 78 56.4
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 6.1e-15 84.0 78 57.7
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 6.1e-15 84.0 78 55.1
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 6.1e-15 84.0 78 55.1
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 1.4e-14 82.8 90 54.4
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 1.4e-14 82.8 78 57.7
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 1.8e-14 82.4 73 58.9
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 1.8e-14 82.4 80 56.2
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 4.0e-14 81.3 76 60.5
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.0e-14 81.3 61 67.2
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 5.2e-14 80.9 78 55.1
Cpa.g.sc28.33 Carica papaya HOM05D002335 ORTHO05D006282 6.8e-14 80.5 78 55.1
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 8.8e-14 80.1 76 56.6
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 1.2e-13 79.7 78 55.1
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 1.2e-13 79.7 78 55.1
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 2.0e-13 79.0 78 53.8
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 2.0e-13 79.0 73 56.2
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 2.6e-13 78.6 78 52.6
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 3.4e-13 78.2 78 53.8
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 9.8e-13 76.6 78 50.0
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 3.7e-12 74.7 51 74.5
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 1.4e-11 72.8 76 52.6
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 3.1e-11 71.6 66 59.1
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 3.1e-11 71.6 78 50.0
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 9.1e-11 70.1 69 53.6
arahy.Tifrunner.gnm1.ann1.HK8DFN Arachis hypogaea HOM05D002335 ORTHO05D006282 2.0e-10 68.9 93 40.9
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 3.5e-10 68.2 76 51.3
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 1.3e-09 66.2 45 75.6
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 2.2e-09 65.5 51 60.8
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 1.5e-08 62.8 78 41.0
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 1.9e-08 62.4 51 56.9
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 4.2e-08 61.2 62 46.8
arahy.Tifrunner.gnm1.ann1.S4WZ34 Arachis hypogaea HOM05D000237 ORTHO05D017465 5.5e-08 60.8 57 50.9
arahy.Tifrunner.gnm1.ann1.WCUD5S Arachis hypogaea HOM05D000237 ORTHO05D017465 2.7e-07 58.5 56 51.8
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 2.7e-07 58.5 51 60.8
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 2.7e-07 58.5 51 58.8
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 4.7e-07 57.8 73 46.6
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 4.7e-07 57.8 56 51.8
arahy.Tifrunner.gnm1.ann1.Y6L4BT Arachis hypogaea HOM05D000237 ORTHO05D017465 6.1e-07 57.4 72 40.3
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 1.0e-06 56.6 41 70.7


User provided reference genes

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