Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 8.5e-99 363.6 177 100.0
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 9.8e-71 270.4 167 77.8
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 9.8e-71 270.4 167 76.6
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 6.4e-70 267.7 167 77.2
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 2.0e-68 262.7 173 72.3
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 2.7e-68 262.3 175 70.9
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 4.6e-68 261.5 166 74.7
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.7e-67 259.6 174 71.3
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 5.0e-67 258.1 173 71.7
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 8.6e-67 257.3 173 71.1
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 1.5e-66 256.5 172 70.3
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 1.9e-66 256.1 172 72.7
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 2.5e-66 255.8 166 74.7
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 2.5e-66 255.8 156 77.6
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 2.1e-65 252.7 172 73.3
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 2.8e-65 252.3 172 72.7
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 3.6e-65 251.9 167 73.1
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 4.7e-65 251.5 172 72.1
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 8.0e-65 250.8 172 72.7
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 8.0e-65 250.8 156 77.6
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 3.1e-64 248.8 156 75.0
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 4.0e-64 248.4 172 71.5
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 4.0e-64 248.4 169 71.6
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 8.9e-64 247.3 172 69.2
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 8.9e-64 247.3 165 70.3
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 1.2e-63 246.9 174 69.5
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 1.5e-63 246.5 167 70.1
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 4.4e-63 245.0 172 68.6
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 5.8e-63 244.6 156 74.4
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 7.5e-63 244.2 167 69.5
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 1.7e-62 243.0 170 67.1
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 1.7e-62 243.0 172 69.2
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 1.7e-62 243.0 172 69.8
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 6.4e-62 241.1 170 66.5
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 1.4e-61 240.0 172 68.6
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.4e-61 240.0 168 69.0
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 2.4e-61 239.2 170 66.5
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 4.1e-61 238.4 166 68.1
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 4.1e-61 238.4 166 68.1
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 4.1e-61 238.4 166 68.1
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 9.2e-61 237.3 172 67.4
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 1.6e-60 236.5 156 73.1
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 2.7e-60 235.7 167 68.9
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 4.6e-60 235.0 168 71.4
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 6.0e-60 234.6 167 68.3
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 1.0e-59 233.8 178 66.9
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 1.7e-59 233.0 171 67.8
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 1.7e-59 233.0 172 68.6
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 1.7e-59 233.0 173 68.2
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 5.1e-59 231.5 174 67.2
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 5.1e-59 231.5 168 67.3
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 6.6e-59 231.1 174 67.8
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 1.1e-58 230.3 167 68.9
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.9e-58 229.6 175 64.0
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 2.5e-58 229.2 156 69.2
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 9.5e-58 227.3 173 67.1
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 9.5e-58 227.3 154 71.4
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 9.5e-58 227.3 180 65.0
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 1.2e-57 226.9 178 64.6
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 6.2e-57 224.6 172 65.7
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 1.1e-56 223.8 173 64.7
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.1e-56 223.8 172 65.1
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 1.4e-56 223.4 172 66.3
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 1.4e-56 223.4 225 54.2
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 1.4e-56 223.4 170 64.1
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 3.1e-56 222.2 175 64.6
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.2e-55 220.3 156 66.0
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 2.6e-55 219.2 151 72.8
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 3.4e-55 218.8 176 63.1
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 3.4e-55 218.8 156 69.2
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 5.8e-55 218.0 222 52.7
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 2.2e-54 216.1 167 63.5
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 6.4e-54 214.5 167 64.7
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 2.4e-53 212.6 125 81.6
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 2.1e-52 209.5 203 55.7
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 6.0e-52 208.0 161 62.1
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 6.0e-52 208.0 172 62.2
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 1.7e-51 206.5 166 64.5
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 1.1e-50 203.8 149 67.8
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 2.5e-50 202.6 178 61.2
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 7.3e-50 201.1 159 60.4
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 7.3e-50 201.1 127 71.7
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 1.2e-49 200.3 181 58.6
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 1.4e-48 196.8 170 61.2
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 3.1e-48 195.7 166 57.8
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 5.8e-47 191.4 122 73.8
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 7.6e-47 191.0 132 71.2
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 9.9e-47 190.7 152 65.8
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 3.8e-46 188.7 141 64.5
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 6.4e-46 188.0 167 56.3
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 1.1e-45 187.2 142 66.2
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 1.9e-45 186.4 171 59.1
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 2.4e-45 186.0 167 61.1
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 5.4e-45 184.9 127 72.4
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 2.1e-44 183.0 168 60.1
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 4.6e-44 181.8 151 64.2
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 4.6e-44 181.8 151 64.2
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 6.0e-44 181.4 169 56.8
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.9e-42 176.4 122 70.5
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 9.6e-42 174.1 172 52.9
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 4.8e-41 171.8 170 54.7
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 8.1e-41 171.0 174 51.1
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 4.0e-40 168.7 128 66.4
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 6.9e-40 167.9 167 55.7
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 6.9e-40 167.9 178 52.2
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 9.0e-40 167.5 168 51.8
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 2.0e-39 166.4 122 70.5
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 2.6e-39 166.0 173 49.7
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 9.9e-39 164.1 136 64.7
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 4.2e-37 158.7 154 53.2
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 6.0e-36 154.8 122 67.2
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 5.1e-35 151.8 137 51.1
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 8.7e-35 151.0 150 56.0
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 5.6e-34 148.3 152 50.7
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.8e-30 135.6 167 48.5
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 3.8e-30 135.6 122 59.0
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 2.4e-29 132.9 148 45.9
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 3.9e-27 125.6 137 46.7
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.4e-24 117.1 151 43.7
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 1.8e-24 116.7 83 63.9
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.5e-23 113.6 151 42.4
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 2.6e-23 112.8 122 46.7
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 1.6e-20 103.6 149 41.6
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 9.6e-18 94.4 151 40.4
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 1.7e-14 83.6 59 64.4
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 8.4e-14 81.3 132 36.4
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 1.0e-11 74.3 123 33.3
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.8e-11 73.6 73 47.9
Prupe.8G259600 Prunus persica HOM05D005667 ORTHO05D007299 5.0e-06 55.5 29 86.2


User provided reference genes

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