Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011447.1 Olea europaea HOM05D001070 ORTHO05D002096 2.2e-35 151.8 75 100.0
Oeu011446.1 Olea europaea HOM05D001070 ORTHO05D002096 1.3e-32 142.5 75 94.7
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 8.8e-21 103.2 98 59.2
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 8.8e-21 103.2 98 59.2
AL7G50370 Arabidopsis lyrata HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
A04p09360 Brassica napus HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
BolC2t10590H Brassica oleracea HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
BolSC28t60312H Brassica oleracea HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
BolSC28t60368H Brassica oleracea HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
BolSC35t60698H Brassica oleracea HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
BolSC44t60817H Brassica oleracea HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
BolSC44t60828H Brassica oleracea HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
BraSC103t45423Z Brassica rapa HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
BraSC138t45540Z Brassica rapa HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
BraSC159t45727Z Brassica rapa HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
BraSC48t46237Z Brassica rapa HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
BraSC54t46367Z Brassica rapa HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
CARHR282400 Cardamine hirsuta HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
SalBow1G3373 Salvia bowleyana HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
SalBow1G6555 Salvia bowleyana HOM05D001070 ORTHO05D002096 3.3e-20 101.3 98 58.2
BolSC45t60915H Brassica oleracea HOM05D001070 ORTHO05D002096 4.4e-20 100.9 99 57.6
Migut.D01245 Erythranthe guttata HOM05D001070 ORTHO05D002096 1.3e-19 99.4 97 57.7
Potri.011G073900 Populus trichocarpa HOM05D001070 ORTHO05D002096 1.3e-19 99.4 98 57.1
Nn031s41609 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.7e-19 99.0 98 57.1
Nn064s42217 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.7e-19 99.0 98 57.1
Nn1g08628 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.7e-19 99.0 98 57.1
Nn212s45207 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.7e-19 99.0 98 57.1
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.7e-19 99.0 98 57.1
CiPaw.01G098400 Carya illinoinensis HOM05D001070 ORTHO05D002096 2.8e-19 98.2 98 56.1
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 3.7e-19 97.8 98 57.1
CAN.G929.2 Capsicum annuum HOM05D001070 ORTHO05D002096 6.3e-19 97.1 98 55.1
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 6.3e-19 97.1 98 55.1
Solyc00g500084.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 6.3e-19 97.1 98 55.1
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 6.3e-19 97.1 98 55.1
Solyc00g500196.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 6.3e-19 97.1 98 55.1
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 6.3e-19 97.1 98 55.1
Ciclev10010879m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.7 98 56.1
Ciclev10013978m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.7 98 56.1
Ciclev10013980m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.7 98 56.1
Ciclev10013987m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.7 98 56.1
Ciclev10014002m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.7 98 56.1
Ciclev10014005m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.7 98 56.1
Ciclev10027654m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.7 98 56.1
Ciclev10030452m.g Citrus clementina HOM05D001070 ORTHO05D002096 8.2e-19 96.7 98 56.1
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 1.1e-18 96.3 98 56.1
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 1.1e-18 96.3 98 56.1
CSS0027235 Camellia sinensis var. sinensis HOM05D001070 ORTHO05D002096 1.8e-18 95.5 98 55.1
RcHm_v2.0_Chr7g0221181 Rosa chinensis HOM05D001070 ORTHO05D002096 1.8e-18 95.5 98 56.1
Solyc11g021310.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.4e-18 95.1 98 54.1
Gohir.1Z049492 Gossypium hirsutum HOM05D001070 ORTHO05D002096 3.1e-18 94.7 96 56.2
Gohir.A03G072900 Gossypium hirsutum HOM05D001070 ORTHO05D002096 3.1e-18 94.7 96 56.2
Gohir.A09G046100 Gossypium hirsutum HOM05D001070 ORTHO05D002096 3.1e-18 94.7 96 56.2
Aqoxy4G02031 Aquilegia oxysepala HOM05D001070 ORTHO05D002096 4.1e-18 94.4 95 55.8
Gohir.D13G086633 Gossypium hirsutum HOM05D001070 ORTHO05D002096 4.1e-18 94.4 96 56.2
PSO541G0682 Papaver somniferum HOM05D001070 ORTHO05D002096 7.0e-18 93.6 98 55.1
Gohir.A09G216580 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.0e-17 92.0 96 54.2
HanXRQChr11g0347371 Helianthus annuus HOM05D001070 ORTHO05D002096 2.0e-17 92.0 98 53.1
Solyc11g044670.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.0e-17 92.0 98 54.1
Gohir.D03G074712 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.6e-17 91.7 96 55.2
Nn2g13236 Nelumbo nucifera HOM05D001070 ORTHO05D002096 7.7e-17 90.1 78 61.5
Nitab4.5_0023521g0030 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.3e-16 89.4 98 51.0
Gohir.A04G057652 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.9e-16 88.2 93 53.8
HanXRQChr00c0336g0573731 Helianthus annuus HOM05D001070 ORTHO05D002096 5.0e-16 87.4 98 51.0
HanXRQChr09g0258561 Helianthus annuus HOM05D001070 ORTHO05D002096 5.0e-16 87.4 98 51.0
HanXRQChr14g0430911 Helianthus annuus HOM05D001070 ORTHO05D002096 5.0e-16 87.4 98 51.0
HanXRQChr17g0557821 Helianthus annuus HOM05D001070 ORTHO05D002096 5.0e-16 87.4 98 51.0
Solyc10g062235.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 5.0e-16 87.4 93 54.8
Gohir.D05G248050 Gossypium hirsutum HOM05D001070 ORTHO05D002096 6.5e-16 87.0 74 62.2
Solyc04g045540.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.5e-15 85.9 98 50.0
Gorai.009G258900 Gossypium raimondii HOM05D001070 ORTHO05D002096 1.9e-15 85.5 71 63.4
Solyc01g017480.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 3.2e-15 84.7 95 51.6
BolSC29t60500H Brassica oleracea HOM05D001070 ORTHO05D002096 4.2e-15 84.3 54 77.8
BolSC29t60620H Brassica oleracea HOM05D001070 ORTHO05D002096 4.2e-15 84.3 54 77.8
BolSC29t60623H Brassica oleracea HOM05D001070 ORTHO05D002096 4.2e-15 84.3 54 77.8
BolSC35t60697H Brassica oleracea HOM05D001070 ORTHO05D002096 4.2e-15 84.3 54 77.8
BolSC37t60788H Brassica oleracea HOM05D001070 ORTHO05D002096 4.2e-15 84.3 54 77.8
BolSC46t60964H Brassica oleracea HOM05D001070 ORTHO05D002096 4.2e-15 84.3 54 77.8
BraSC25t45916Z Brassica rapa HOM05D001070 ORTHO05D002096 4.2e-15 84.3 54 77.8
Nn029s41580 Nelumbo nucifera HOM05D001070 ORTHO05D002096 4.2e-15 84.3 85 56.5
PGR081G0002 Punica granatum HOM05D001070 ORTHO05D002096 4.2e-15 84.3 54 77.8
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 4.2e-15 84.3 54 77.8
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 7.2e-15 83.6 54 77.8
HanXRQChr12g0376641 Helianthus annuus HOM05D001070 ORTHO05D002096 6.1e-14 80.5 99 47.5
C09p40290 Brassica napus HOM05D001070 ORTHO05D002096 8.0e-14 80.1 96 51.0
Peaxi162Scf00080g00524 Petunia axillaris HOM05D001070 ORTHO05D002096 8.0e-14 80.1 54 72.2
Peaxi162Scf00139g00015 Petunia axillaris HOM05D001070 ORTHO05D002096 8.0e-14 80.1 54 72.2
Gohir.A11G056832 Gossypium hirsutum HOM05D001070 ORTHO05D002096 1.0e-13 79.7 54 72.2
AL5G20280 Arabidopsis lyrata HOM05D001070 ORTHO05D002096 1.4e-13 79.3 87 54.0
HanXRQChr11g0336631 Helianthus annuus HOM05D001070 ORTHO05D002096 1.4e-13 79.3 98 49.0
HanXRQChr00c0561g0575891 Helianthus annuus HOM05D001070 ORTHO05D002096 4.0e-13 77.8 54 70.4
HanXRQChr17g0557701 Helianthus annuus HOM05D001070 ORTHO05D002096 4.0e-13 77.8 54 70.4
RcHm_v2.0_Chr4g0392781 Rosa chinensis HOM05D001070 ORTHO05D002096 4.0e-13 77.8 88 52.3
Nitab4.5_0004137g0050 Nicotiana tabacum HOM05D001070 ORTHO05D002096 8.8e-13 76.6 54 70.4
Gohir.A10G117450 Gossypium hirsutum HOM05D001070 ORTHO05D002096 2.0e-12 75.5 54 70.4
Lsat_1_v5_gn_6_14481 Lactuca sativa HOM05D001070 ORTHO05D002096 2.0e-12 75.5 54 66.7
Medtr1g110440 Medicago truncatula HOM05D001070 ORTHO05D002096 2.0e-12 75.5 73 54.8
Solyc01g017240.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 2.6e-12 75.1 46 76.1
Ciclev10027641m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.4e-12 74.7 87 51.7
HanXRQChr14g0428451 Helianthus annuus HOM05D001070 ORTHO05D002096 4.4e-12 74.3 46 76.1
HanXRQChr14g0428511 Helianthus annuus HOM05D001070 ORTHO05D002096 4.4e-12 74.3 46 76.1
Nitab4.5_0004841g0060 Nicotiana tabacum HOM05D001070 ORTHO05D002096 9.7e-12 73.2 54 68.5
AT2G07739 Arabidopsis thaliana HOM05D001070 ORTHO05D002096 1.3e-11 72.8 88 52.3
ATMG00370 Arabidopsis thaliana HOM05D001070 ORTHO05D002096 1.3e-11 72.8 88 52.3
FAN13G2309 Fragaria x ananassa HOM05D001070 ORTHO05D002096 1.3e-11 72.8 84 51.2
Gohir.D13G124850 Gossypium hirsutum HOM05D001070 ORTHO05D002096 3.7e-11 71.2 85 50.6
Peaxi162Scf00080g00516 Petunia axillaris HOM05D001070 ORTHO05D002096 3.7e-11 71.2 54 70.4
SGA_v2.0_scaffold140G35506 Striga asiatica HOM05D001070 ORTHO05D002096 3.7e-11 71.2 100 46.0
HanXRQChr17g0557721 Helianthus annuus HOM05D001070 ORTHO05D002096 4.8e-11 70.9 54 64.8
Nitab4.5_0004697g0030 Nicotiana tabacum HOM05D001070 ORTHO05D002096 4.8e-11 70.9 89 47.2
DCAR_019125 Daucus carota HOM05D001070 ORTHO05D002096 1.1e-10 69.7 36 88.9
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 1.4e-10 69.3 100 41.0
Hund08795 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.8e-10 68.9 73 53.4
Hund17849 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.8e-10 68.9 73 53.4
Hund27460 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.8e-10 68.9 73 53.4
Hund27646 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.8e-10 68.9 73 53.4
Hund27754 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.8e-10 68.9 73 53.4
Hund27829 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.8e-10 68.9 73 53.4
Hund28436 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.8e-10 68.9 73 53.4
Hund28590 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.8e-10 68.9 73 53.4
Hund28611 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.8e-10 68.9 73 53.4
Hund29319 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.8e-10 68.9 73 53.4
Hund29401 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.8e-10 68.9 73 53.4
Hund29519 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.8e-10 68.9 73 53.4
Hund29746 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.8e-10 68.9 73 53.4
HPP92_028431 Vanilla planifolia HOM05D001070 ORTHO05D002096 1.8e-10 68.9 54 63.0
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 2.4e-10 68.6 98 46.9
Hund22091 Selenicereus undatus HOM05D001070 ORTHO05D002096 2.4e-10 68.6 73 53.4
MELO3C030628.2 Cucumis melo HOM05D001070 ORTHO05D002096 3.1e-10 68.2 44 77.3
HanXRQChr09g0275321 Helianthus annuus HOM05D001070 ORTHO05D002096 7.0e-10 67.0 91 46.2
Lju5009P0T27 Lonicera japonica HOM05D001070 ORTHO05D002096 9.1e-10 66.6 44 70.5
FAN28G2624 Fragaria x ananassa HOM05D002169 ORTHO05D006577 2.0e-09 65.5 80 48.8
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 2.7e-09 65.1 103 42.7
CARHR282770 Cardamine hirsuta HOM05D001070 ORTHO05D002096 4.5e-09 64.3 86 45.3
Lalb_Chr00c06g0404661 Lupinus albus HOM05D001070 ORTHO05D002096 4.5e-09 64.3 95 40.0
Lalb_Chr13g0293691 Lupinus albus HOM05D001070 ORTHO05D002096 4.5e-09 64.3 95 40.0
Medtr4g006080 Medicago truncatula HOM05D001070 ORTHO05D002096 1.0e-08 63.2 108 37.0
Hund29395 Selenicereus undatus HOM05D001070 ORTHO05D002096 1.0e-08 63.2 36 83.3
Nitab4.5_0002691g0060 Nicotiana tabacum HOM05D001070 ORTHO05D002096 6.5e-08 60.5 35 77.1
MBI01_g06564_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D002096 8.5e-08 60.1 43 69.8
HanXRQChr17g0569781 Helianthus annuus HOM05D001070 ORTHO05D002096 5.5e-07 57.4 70 47.1


User provided reference genes

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