Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 1.6e-77 292.7 151 100.0
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 4.8e-50 201.4 161 70.2
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 4.6e-45 184.9 165 64.2
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 5.7e-27 124.8 155 47.7
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 7.7e-24 114.4 156 46.2
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 3.0e-20 102.4 159 46.5
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 2.6e-19 99.4 162 43.8
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 1.8e-17 93.2 156 41.0
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 2.4e-17 92.8 118 46.6
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 1.6e-16 90.1 165 41.8
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 1.6e-16 90.1 146 47.3
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 2.0e-16 89.7 155 37.4
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 8.5e-15 84.3 123 46.3
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 1.5e-14 83.6 165 38.8
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 4.2e-14 82.0 163 37.4
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 7.2e-14 81.3 81 54.3
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 9.4e-14 80.9 81 54.3
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 6.1e-13 78.2 176 35.2
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 1.8e-12 76.6 133 42.1
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.3e-12 76.3 79 54.4
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 2.3e-12 76.3 168 38.7
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 6.7e-12 74.7 148 34.5
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 6.7e-12 74.7 102 47.1
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 8.8e-12 74.3 149 34.2
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.2e-11 73.9 83 53.0
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 1.2e-11 73.9 169 35.5
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 1.2e-11 73.9 72 59.7
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.5e-11 73.6 159 37.1
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 2.0e-11 73.2 157 36.9
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 2.0e-11 73.2 152 36.2
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 2.6e-11 72.8 142 35.9
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 4.4e-11 72.0 150 36.0
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 7.5e-11 71.2 128 38.3
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 9.7e-11 70.9 82 51.2
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.7e-10 70.1 156 36.5
SalBow4G0071 Salvia bowleyana HOM05D005967 ORTHO05D005174 1.7e-10 70.1 102 47.1
Nitab4.5_0000349g0170 Nicotiana tabacum HOM05D016316 ORTHO05D018871 2.2e-10 69.7 151 35.1
DCAR_020849 Daucus carota HOM05D005967 ORTHO05D005174 2.8e-10 69.3 156 38.5
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 3.7e-10 68.9 149 36.2
VMungo1383G3210 Vigna mungo HOM05D005967 ORTHO05D005174 1.1e-09 67.4 80 50.0
Glyma.08G358900 Glycine max HOM05D005967 ORTHO05D005174 1.4e-09 67.0 113 43.4
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 3.1e-09 65.9 130 38.5
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 3.1e-09 65.9 85 47.1
TPR.G23268 Trifolium pratense HOM05D005967 ORTHO05D005174 3.1e-09 65.9 83 47.0
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 4.1e-09 65.5 82 48.8
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 5.3e-09 65.1 162 35.2
Gohir.A04G082200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.3e-09 65.1 74 54.1
MSTRG.19086 Avicennia marina HOM05D005967 ORTHO05D005174 7.0e-09 64.7 113 44.2
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 7.0e-09 64.7 85 48.2
TWI53G1171 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.2e-08 63.9 109 43.1
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 1.6e-08 63.5 83 48.2
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 2.0e-08 63.2 134 35.1
Glyma.18G177800 Glycine max HOM05D005967 ORTHO05D005174 2.0e-08 63.2 83 48.2
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 2.7e-08 62.8 161 36.0
Psat3g141040 Pisum sativum HOM05D005967 ORTHO05D005174 2.7e-08 62.8 75 48.0
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 2.7e-08 62.8 137 34.3
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 3.5e-08 62.4 113 40.7
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.9e-08 61.6 73 47.9
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 5.9e-08 61.6 83 43.4
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 7.7e-08 61.2 112 40.2
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 7.7e-08 61.2 153 32.7
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 7.7e-08 61.2 111 38.7
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 1.0e-07 60.8 116 40.5
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 1.0e-07 60.8 116 40.5
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 1.0e-07 60.8 116 40.5
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 1.0e-07 60.8 168 32.7
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 1.0e-07 60.8 60 53.3
AT5G02420 Arabidopsis thaliana HOM05D010528 ORTHO05D005174 1.3e-07 60.5 79 45.6
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.7e-07 60.1 161 32.3
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.7e-07 60.1 161 32.3
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 1.7e-07 60.1 119 35.3
Medtr4g021870 Medicago truncatula HOM05D005967 ORTHO05D005174 1.7e-07 60.1 74 45.9
Phvul.008G100200 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 1.7e-07 60.1 175 32.0
Aa31LG1G22380 Aethionema arabicum HOM05D010528 ORTHO05D005174 2.2e-07 59.7 110 40.0
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 2.2e-07 59.7 100 40.0
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 2.2e-07 59.7 112 40.2
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.2e-07 59.7 73 46.6
Medtr7g060440 Medicago truncatula HOM05D005967 ORTHO05D005174 2.2e-07 59.7 82 46.3
SalBow3G2287 Salvia bowleyana HOM05D005967 ORTHO05D005174 2.2e-07 59.7 120 35.0
AL6G11650 Arabidopsis lyrata HOM05D010528 ORTHO05D005174 2.9e-07 59.3 79 44.3
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.9e-07 59.3 81 46.9
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 2.9e-07 59.3 80 48.8
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 2.9e-07 59.3 138 32.6
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 3.8e-07 58.9 113 38.9
VMungo1309G2816 Vigna mungo HOM05D005967 ORTHO05D005174 5.0e-07 58.5 59 49.2
Sed0010435 Sechium edule HOM05D023073 ORTHO05D005174 8.5e-07 57.8 84 42.9
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 8.5e-07 57.8 61 52.5
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.1e-06 57.4 143 33.6
Atru.chr8.1967 Acer truncatum HOM05D005967 ORTHO05D005174 1.5e-06 57.0 86 41.9
TPR.G5598 Trifolium pratense HOM05D005967 ORTHO05D005174 1.5e-06 57.0 103 37.9
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 1.9e-06 56.6 150 34.0
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.5e-06 56.2 77 44.2
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 4.2e-06 55.5 71 47.9
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 4.2e-06 55.5 143 34.3
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 4.2e-06 55.5 81 50.6
unitig_26.g9196 Utricularia gibba HOM05D031528 ORTHO05D035026 4.2e-06 55.5 79 43.0
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 5.5e-06 55.1 101 42.6
CSS0006279 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 5.5e-06 55.1 152 31.6
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 5.5e-06 55.1 140 35.7
CARHR210990 Cardamine hirsuta HOM05D010528 ORTHO05D005174 5.5e-06 55.1 108 37.0
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 5.5e-06 55.1 58 48.3
vmacro20146 Vaccinium macrocarpon HOM05D005967 ORTHO05D005174 5.5e-06 55.1 104 35.6
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 7.2e-06 54.7 61 49.2
ClCG04G008210 Citrullus lanatus HOM05D023073 ORTHO05D005174 9.4e-06 54.3 79 43.0
Sed0016652 Sechium edule HOM05D023073 ORTHO05D005174 9.4e-06 54.3 86 46.5


User provided reference genes

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