Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 1.6e-55 219.2 107 100.0
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 5.8e-34 147.5 109 66.1
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 7.6e-34 147.1 106 67.0
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.7e-33 146.0 109 65.1
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 6.4e-33 144.1 111 64.0
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 1.4e-32 142.9 111 60.4
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 1.9e-32 142.5 116 60.3
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 3.2e-32 141.7 112 61.6
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 4.6e-31 137.9 110 60.9
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 4.6e-31 137.9 110 62.7
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 1.0e-30 136.7 109 62.4
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.0e-30 136.7 110 64.5
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 2.3e-30 135.6 110 60.0
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 3.9e-30 134.8 110 60.0
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 5.1e-30 134.4 111 59.5
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 8.7e-30 133.7 104 61.5
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.1e-29 133.3 110 60.9
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 1.1e-29 133.3 110 60.9
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 1.5e-29 132.9 106 59.4
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 1.5e-29 132.9 106 61.3
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 1.9e-29 132.5 110 60.0
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 1.9e-29 132.5 109 57.8
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 1.9e-29 132.5 107 64.5
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 2.5e-29 132.1 104 61.5
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 3.3e-29 131.7 110 57.3
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 9.6e-29 130.2 104 61.5
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 1.3e-28 129.8 111 60.4
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 2.1e-28 129.0 107 59.8
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 2.1e-28 129.0 110 60.9
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 3.6e-28 128.3 111 56.8
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 4.8e-28 127.9 106 61.3
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 4.8e-28 127.9 104 58.7
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 8.1e-28 127.1 107 58.9
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 8.1e-28 127.1 109 58.7
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 1.1e-27 126.7 107 61.7
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.8e-27 125.9 109 55.0
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 2.4e-27 125.6 105 61.0
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 2.4e-27 125.6 107 59.8
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 4.0e-27 124.8 104 58.7
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 5.3e-27 124.4 104 59.6
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 6.9e-27 124.0 108 59.3
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 9.0e-27 123.6 104 57.7
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 9.0e-27 123.6 108 57.4
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 1.5e-26 122.9 102 57.8
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 2.6e-26 122.1 106 59.4
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 3.4e-26 121.7 107 57.9
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 3.4e-26 121.7 110 57.3
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 3.4e-26 121.7 109 56.0
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 4.5e-26 121.3 114 54.4
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 4.5e-26 121.3 109 56.9
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 4.5e-26 121.3 106 57.5
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 5.8e-26 120.9 107 57.9
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 5.8e-26 120.9 107 57.9
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 5.8e-26 120.9 108 57.4
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 9.9e-26 120.2 91 60.4
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 9.9e-26 120.2 109 56.0
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 9.9e-26 120.2 109 56.0
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 9.9e-26 120.2 109 56.0
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.3e-25 119.8 111 56.8
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 1.3e-25 119.8 104 61.5
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.7e-25 119.4 111 55.0
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 2.2e-25 119.0 110 54.5
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 2.2e-25 119.0 111 55.0
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 2.9e-25 118.6 107 57.0
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 4.9e-25 117.9 109 53.2
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 4.9e-25 117.9 109 53.2
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 4.9e-25 117.9 109 56.0
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 4.9e-25 117.9 109 55.0
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 4.9e-25 117.9 102 59.8
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 6.4e-25 117.5 106 56.6
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 8.4e-25 117.1 109 53.2
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 1.1e-24 116.7 89 61.8
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 1.1e-24 116.7 115 53.0
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 3.2e-24 115.2 105 55.2
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 4.2e-24 114.8 107 51.4
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 4.2e-24 114.8 102 55.9
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 5.4e-24 114.4 108 52.8
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 7.1e-24 114.0 109 53.2
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 1.2e-23 113.2 106 52.8
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 1.2e-23 113.2 109 53.2
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 2.7e-23 112.1 90 62.2
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 6.0e-23 110.9 90 56.7
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 7.9e-23 110.5 92 53.3
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 7.9e-23 110.5 102 55.9
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 1.8e-22 109.4 117 47.0
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 1.8e-22 109.4 96 56.2
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 2.3e-22 109.0 105 55.2
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 6.7e-22 107.5 72 66.7
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 1.5e-21 106.3 91 56.0
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 3.3e-21 105.1 62 72.6
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 9.6e-21 103.6 88 55.7
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 9.6e-21 103.6 72 63.9
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 1.3e-20 103.2 60 75.0
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.6e-20 102.8 92 53.3
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 2.1e-20 102.4 67 68.7
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 4.8e-20 101.3 60 73.3
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 4.8e-20 101.3 60 75.0
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 4.8e-20 101.3 67 67.2
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 6.2e-20 100.9 67 67.2
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 6.2e-20 100.9 60 73.3
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 8.1e-20 100.5 60 73.3
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 2.4e-19 99.0 98 48.0
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 5.3e-19 97.8 60 73.3
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 9.0e-19 97.1 72 58.3
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 1.2e-18 96.7 125 45.6
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 1.5e-18 96.3 87 57.5
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.5e-18 96.3 92 52.2
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 5.8e-18 94.4 60 70.0
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 5.8e-18 94.4 60 70.0
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 5.8e-18 94.4 60 70.0
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 5.8e-18 94.4 74 56.8
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 7.6e-18 94.0 63 65.1
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 9.9e-18 93.6 60 70.0
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 1.3e-17 93.2 74 58.1
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 2.9e-17 92.0 98 44.9
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 3.8e-17 91.7 60 68.3
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 3.8e-17 91.7 70 57.1
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 3.8e-17 91.7 64 62.5
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 4.9e-17 91.3 63 63.5
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 1.9e-16 89.4 73 58.9
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 4.2e-16 88.2 65 61.5
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 4.2e-16 88.2 57 68.4
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 6.0e-15 84.3 51 70.6
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 1.8e-14 82.8 63 54.0
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 8.7e-14 80.5 63 54.0
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 8.7e-14 80.5 63 54.0
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 1.9e-13 79.3 79 50.6
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 5.6e-13 77.8 63 52.4
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 5.6e-13 77.8 63 52.4
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 5.6e-13 77.8 63 52.4
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 5.6e-13 77.8 63 52.4
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 2.3e-06 55.8 64 35.9


User provided reference genes

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