Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011326.1 Olea europaea HOM05D000192 ORTHO05D006528 2.1e-80 302.4 161 100.0
Oeu004529.1 Olea europaea HOM05D000192 ORTHO05D006528 4.0e-39 165.2 165 58.2
Thecc.08G057400 Theobroma cacao HOM05D000192 ORTHO05D006528 3.5e-35 152.1 169 53.8
Potri.002G011600 Populus trichocarpa HOM05D000192 ORTHO05D006528 2.5e-33 146.0 167 53.3
Manes.18G006100 Manihot esculenta HOM05D000192 ORTHO05D006528 4.3e-33 145.2 168 50.6
QL02p013914 Quercus lobata HOM05D000192 ORTHO05D006528 4.3e-33 145.2 167 52.1
Migut.C00947 Erythranthe guttata HOM05D000192 ORTHO05D006528 7.4e-33 144.4 158 57.0
Gohir.D01G093300 Gossypium hirsutum HOM05D000192 ORTHO05D006528 7.4e-33 144.4 170 51.8
COL.COLO4_03996 Corchorus olitorius HOM05D000192 ORTHO05D006528 1.3e-32 143.7 169 49.1
Gorai.002G118700 Gossypium raimondii HOM05D000192 ORTHO05D006528 1.3e-32 143.7 170 51.8
Manes.05G135200 Manihot esculenta HOM05D000192 ORTHO05D006528 2.8e-32 142.5 173 50.3
Duzib093G0457 Durio zibethinus HOM05D000192 ORTHO05D006528 4.8e-32 141.7 169 51.5
Solyc04g082270.3 Solanum lycopersicum HOM05D000192 ORTHO05D006528 2.4e-31 139.4 170 51.2
Sopen04g035890 Solanum pennellii HOM05D000192 ORTHO05D006528 2.4e-31 139.4 171 51.5
Duzib041G0263 Durio zibethinus HOM05D000192 ORTHO05D006528 3.1e-31 139.0 170 51.8
Sabra05G0193000 Salix brachista HOM05D000192 ORTHO05D006528 3.1e-31 139.0 170 49.4
Potri.005G249500 Populus trichocarpa HOM05D000192 ORTHO05D006528 4.1e-31 138.7 170 50.6
PGSC0003DMG400009973 Solanum tuberosum HOM05D000192 ORTHO05D006528 4.1e-31 138.7 170 51.2
Cc10_g00760 Coffea canephora HOM05D000192 ORTHO05D006528 6.9e-31 137.9 175 49.7
CiPaw.07G139700 Carya illinoinensis HOM05D000192 ORTHO05D006528 1.5e-30 136.7 168 50.6
Ciclev10003381m.g Citrus clementina HOM05D000192 ORTHO05D006528 2.0e-30 136.3 169 47.3
Gohir.A01G106900 Gossypium hirsutum HOM05D000192 ORTHO05D006528 2.0e-30 136.3 169 49.7
CAN.G311.110 Capsicum annuum HOM05D000192 ORTHO05D006528 3.4e-30 135.6 170 50.6
Cfa014060 Carpinus fangiana HOM05D000192 ORTHO05D006528 1.0e-29 134.0 168 48.8
vmacro04400 Vaccinium macrocarpon HOM05D000192 ORTHO05D006528 2.2e-29 132.9 164 52.4
Cfa014058 Carpinus fangiana HOM05D000192 ORTHO05D006528 2.9e-29 132.5 168 48.8
Nitab4.5_0000337g0210 Nicotiana tabacum HOM05D000192 ORTHO05D006528 2.9e-29 132.5 168 53.6
Nitab4.5_0002710g0070 Nicotiana tabacum HOM05D000192 ORTHO05D006528 2.9e-29 132.5 172 53.5
Haze_22755 Corylus avellana HOM05D000192 ORTHO05D006528 3.8e-29 132.1 168 48.2
Rhsim07G0254600 Rhododendron simsii HOM05D000192 ORTHO05D006528 5.0e-29 131.7 165 52.1
Gohir.A05G180100 Gossypium hirsutum HOM05D000192 ORTHO05D006528 1.1e-28 130.6 169 47.3
Peaxi162Scf01481g00033 Petunia axillaris HOM05D000192 ORTHO05D006528 1.4e-28 130.2 151 57.6
Rhsim07G0254500 Rhododendron simsii HOM05D000192 ORTHO05D006528 1.9e-28 129.8 167 50.9
Gohir.D05G183100 Gossypium hirsutum HOM05D000192 ORTHO05D006528 7.2e-28 127.9 169 47.3
Atru.chr13.154 Acer truncatum HOM05D000192 ORTHO05D006528 9.3e-28 127.5 173 46.2
CSS0046122 Camellia sinensis var. sinensis HOM05D000192 ORTHO05D006528 1.6e-27 126.7 146 54.8
DCAR_009526 Daucus carota HOM05D000192 ORTHO05D006528 2.1e-27 126.3 170 45.3
Rhsim07G0254400 Rhododendron simsii HOM05D000192 ORTHO05D006528 3.6e-27 125.6 163 49.1
Sabra02G0009200 Salix brachista HOM05D000192 ORTHO05D006528 3.6e-27 125.6 159 49.7
TWI56G1025 Tripterygium wilfordii HOM05D000192 ORTHO05D006528 3.6e-27 125.6 161 47.8
Sabra02G0009100 Salix brachista HOM05D000192 ORTHO05D006528 4.6e-27 125.2 158 48.7
Actinidia37969 Actinidia chinensis HOM05D000192 ORTHO05D006528 6.7e-26 121.3 167 46.7
Peaxi162Scf00400g00022 Petunia axillaris HOM05D000192 ORTHO05D006528 8.8e-26 120.9 164 50.0
TAR628G1559 Trochodendron aralioides HOM05D000192 ORTHO05D006528 1.1e-25 120.6 171 45.0
RcHm_v2.0_Chr6g0304151 Rosa chinensis HOM05D000192 ORTHO05D006528 2.5e-25 119.4 174 45.4
SGA_v2.0_scaffold108G30845 Striga asiatica HOM05D000192 ORTHO05D006528 2.5e-25 119.4 163 48.5
Nn5g30919 Nelumbo nucifera HOM05D000192 ORTHO05D006528 4.3e-25 118.6 179 44.1
FAN15G0671 Fragaria x ananassa HOM05D000192 ORTHO05D006528 2.8e-24 115.9 174 43.1
Cpa.g.sc26.210 Carica papaya HOM05D000192 ORTHO05D006528 6.3e-24 114.8 170 45.9
FvH4_2g37580 Fragaria vesca HOM05D000192 ORTHO05D006528 8.2e-24 114.4 172 43.6
Migut.C00951 Erythranthe guttata HOM05D000192 ORTHO05D006528 1.1e-23 114.0 141 51.1
BcaC08g47122 Brassica carinata HOM05D000192 ORTHO05D006528 1.8e-23 113.2 172 43.6
FAN27G2646 Fragaria x ananassa HOM05D000192 ORTHO05D006528 1.8e-23 113.2 172 43.0
BcaC08g47275 Brassica carinata HOM05D000192 ORTHO05D006528 4.1e-23 112.1 172 43.6
C06p50200 Brassica napus HOM05D000192 ORTHO05D006528 4.1e-23 112.1 172 43.6
BolC6t40060H Brassica oleracea HOM05D000192 ORTHO05D006528 4.1e-23 112.1 172 43.6
Sp5g31380 Schrenkiella parvula HOM05D000192 ORTHO05D006528 4.1e-23 112.1 172 43.0
TAR376G0017 Trochodendron aralioides HOM05D000192 ORTHO05D006528 5.3e-23 111.7 166 42.8
A07p41810 Brassica napus HOM05D000192 ORTHO05D006528 6.9e-23 111.3 172 43.6
SalBow7G2283 Salvia bowleyana HOM05D000192 ORTHO05D006528 2.0e-22 109.8 147 49.0
MELO3C017013.2 Cucumis melo HOM05D000192 ORTHO05D006528 2.6e-22 109.4 172 41.3
THA.LOC104813758 Tarenaya hassleriana HOM05D000192 ORTHO05D006528 2.6e-22 109.4 172 43.0
Nn6g31750 Nelumbo nucifera HOM05D000192 ORTHO05D006528 4.5e-22 108.6 170 42.4
Aa31LG4G6330 Aethionema arabicum HOM05D000192 ORTHO05D006528 5.9e-22 108.2 172 44.2
Sed0010871 Sechium edule HOM05D000192 ORTHO05D006528 5.9e-22 108.2 160 41.9
THA.LOC104807040 Tarenaya hassleriana HOM05D000192 ORTHO05D006528 7.7e-22 107.8 171 42.1
Thhalv10019441m.g Eutrema salsugineum HOM05D000192 ORTHO05D006528 1.0e-21 107.5 173 41.6
CsaV3_4G037150 Cucumis sativus L. HOM05D000192 ORTHO05D006528 1.3e-21 107.1 170 42.9
AL2G36320 Arabidopsis lyrata HOM05D000192 ORTHO05D006528 1.7e-21 106.7 172 43.6
AT1G76240 Arabidopsis thaliana HOM05D000192 ORTHO05D006528 1.7e-21 106.7 172 43.0
BraA07t31711Z Brassica rapa HOM05D000192 ORTHO05D006528 1.7e-21 106.7 172 42.4
Carub.0002s2313 Capsella rubella HOM05D000192 ORTHO05D006528 1.7e-21 106.7 172 43.0
unitig_747.g21520 Utricularia gibba HOM05D000192 ORTHO05D006528 2.2e-21 106.3 166 46.4
ClCG11G018620 Citrullus lanatus HOM05D000192 ORTHO05D006528 3.8e-21 105.5 168 44.0
CARHR069800 Cardamine hirsuta HOM05D000192 ORTHO05D006528 6.5e-21 104.8 170 41.8
Glyma.04G018800 Glycine max HOM05D000192 ORTHO05D006528 8.5e-21 104.4 176 39.2
CANSAT25G1315 Cannabis sativa HOM05D000192 ORTHO05D006528 1.1e-20 104.0 174 42.5
THA.LOC104809754 Tarenaya hassleriana HOM05D000192 ORTHO05D006528 3.2e-20 102.4 177 41.2
EL10Ac1g01984 Beta vulgaris HOM05D000192 ORTHO05D006528 4.2e-20 102.1 181 40.3
unitig_0.g2103 Utricularia gibba HOM05D000192 ORTHO05D006528 5.5e-20 101.7 166 44.0
Phvul.009G021700 Phaseolus vulgaris HOM05D000192 ORTHO05D006528 9.4e-20 100.9 181 37.0
BcaB05g24976 Brassica carinata HOM05D000192 ORTHO05D006528 6.1e-19 98.2 167 41.9
Ca_15442_v3 Cicer arietinum L. HOM05D000192 ORTHO05D006528 3.0e-18 95.9 180 39.4
Aqoxy6G01755 Aquilegia oxysepala HOM05D000192 ORTHO05D006528 3.9e-18 95.5 172 41.3
Glyma.06G019100 Glycine max HOM05D000192 ORTHO05D006528 3.9e-18 95.5 184 37.0
VMungo1309G1647 Vigna mungo HOM05D000192 ORTHO05D006528 6.7e-18 94.7 173 35.3
PGR083G2156 Punica granatum HOM05D000192 ORTHO05D006528 8.8e-18 94.4 174 39.1
Lsat_1_v5_gn_9_44960 Lactuca sativa HOM05D000192 ORTHO05D006528 1.5e-17 93.6 165 41.2
Prupe.1G355300 Prunus persica HOM05D000192 ORTHO05D006528 2.0e-17 93.2 199 34.7
TPR.G38156 Trifolium pratense HOM05D000192 ORTHO05D006528 5.7e-17 91.7 184 35.3
Medtr3g115150 Medicago truncatula HOM05D000192 ORTHO05D006528 9.7e-17 90.9 185 33.5
Lj1g0016081 Lotus japonicus HOM05D000192 ORTHO05D006528 1.3e-16 90.5 185 34.6
PSO675G4094 Papaver somniferum HOM05D000192 ORTHO05D006528 1.3e-16 90.5 180 41.1
arahy.Tifrunner.gnm1.ann1.D59EVQ Arachis hypogaea HOM05D000192 ORTHO05D006528 3.7e-16 89.0 195 33.3
HanXRQChr05g0146821 Helianthus annuus HOM05D000192 ORTHO05D006528 3.7e-16 89.0 165 40.6
PSO541G6369 Papaver somniferum HOM05D000192 ORTHO05D006528 3.7e-16 89.0 180 40.0
Sed0016603 Sechium edule HOM05D000192 ORTHO05D006528 3.7e-16 89.0 159 36.5
MBI08_g42655_MAGBIO Magnolia biondii HOM05D000192 ORTHO05D006528 6.3e-16 88.2 165 40.0
AUR62036889 Chenopodium quinoa HOM05D000192 ORTHO05D006528 1.8e-15 86.7 183 39.3
MD08G1003400 Malus domestica HOM05D000192 ORTHO05D006528 1.8e-15 86.7 196 33.2
Ah.11g041040 Amaranthus hybridus HOM05D000192 ORTHO05D006528 9.1e-15 84.3 186 40.3
ECA232G4383 Erigeron canadensis HOM05D000192 ORTHO05D006528 1.2e-14 84.0 166 39.8
GSVIVG01008683001 Vitis vinifera HOM05D000192 ORTHO05D006528 3.4e-14 82.4 92 53.3
ClCG08G009500 Citrullus lanatus HOM05D000192 ORTHO05D006528 1.0e-13 80.9 162 34.6
ClCG08G009560 Citrullus lanatus HOM05D000192 ORTHO05D006528 1.0e-13 80.9 162 34.6
Sed0005663 Sechium edule HOM05D000192 ORTHO05D006528 1.3e-13 80.5 161 36.0
CsaV3_6G031640 Cucumis sativus L. HOM05D000192 ORTHO05D006528 3.8e-13 79.0 162 34.0
Sc15g0004480 Simmondsia chinensis HOM05D000192 ORTHO05D006528 5.0e-13 78.6 161 38.5
Lalb_Chr03g0033641 Lupinus albus HOM05D000192 ORTHO05D006528 1.1e-12 77.4 179 32.4
MELO3C026545.2 Cucumis melo HOM05D000192 ORTHO05D006528 4.2e-12 75.5 162 33.3
Eucgr.F01753 Eucalyptus grandis HOM05D000192 ORTHO05D006528 5.5e-12 75.1 145 39.3
Gorai.009G188400 Gossypium raimondii HOM05D000192 ORTHO05D006528 3.6e-11 72.4 99 45.5
Ah.00g000410 Amaranthus hybridus HOM05D000192 ORTHO05D006528 8.0e-11 71.2 178 37.6
PSO170G2613 Papaver somniferum HOM05D000192 ORTHO05D006528 3.9e-10 68.9 178 32.6
CDE04G2625 Ceratophyllum demersum HOM05D000192 ORTHO05D006528 1.7e-08 63.5 132 31.1
CDE02G3917 Ceratophyllum demersum HOM05D000192 ORTHO05D006528 1.1e-07 60.8 132 29.5
unitig_26.g9891 Utricularia gibba HOM05D000192 ORTHO05D425754 4.5e-06 55.5 63 50.8


User provided reference genes

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