Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 0.0e+00 1937.9 975 100.0
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1255.4 954 66.9
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1204.9 987 64.2
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1193.3 989 63.6
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 0.0e+00 1179.5 965 64.4
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 0.0e+00 1174.5 957 64.1
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 0.0e+00 1173.3 957 64.1
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1167.9 978 64.0
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 0.0e+00 1164.4 960 64.3
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1161.4 956 64.3
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1154.8 967 61.5
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1154.4 959 63.5
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1153.3 960 62.6
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 0.0e+00 1152.5 962 62.5
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1149.4 965 62.0
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 0.0e+00 1143.6 977 61.9
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1141.3 959 62.0
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1136.7 973 60.4
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1135.9 963 62.2
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1132.1 965 61.1
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1128.2 963 60.3
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1125.9 970 60.2
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 0.0e+00 1122.1 894 63.6
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1121.7 904 61.8
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1119.4 904 61.7
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 0.0e+00 1115.9 965 61.6
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1109.7 964 59.1
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1108.6 974 61.3
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 0.0e+00 1107.8 958 59.6
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 0.0e+00 1106.7 1031 57.1
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 0.0e+00 1102.0 969 60.4
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 0.0e+00 1101.3 844 66.9
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 0.0e+00 1093.2 976 59.4
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1090.5 971 60.1
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 0.0e+00 1089.7 947 60.0
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 0.0e+00 1089.3 940 59.4
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1087.8 976 57.4
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1081.2 971 60.0
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 0.0e+00 1080.5 891 63.1
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 0.0e+00 1079.7 951 59.4
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 0.0e+00 1078.5 967 59.8
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1075.1 903 59.8
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 1.3e-311 1072.8 947 58.8
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 2.0e-311 1072.4 977 57.0
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 6.0e-311 1070.8 929 57.9
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 1.0e-310 1070.1 937 59.9
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 1.7e-310 1069.3 940 59.4
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 2.8e-308 1062.0 972 59.8
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 6.2e-308 1060.8 1007 56.3
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 1.1e-307 1060.1 959 60.0
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 1.1e-307 1060.1 954 57.9
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 9.8e-306 1053.5 902 59.1
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 1.7e-305 1052.7 1009 55.4
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 2.2e-305 1052.4 908 59.4
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 2.2e-305 1052.4 914 59.1
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 1.1e-304 1050.0 976 56.8
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 1.4e-304 1049.7 994 57.9
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 2.4e-304 1048.9 906 57.7
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 1.3e-302 1043.1 951 58.4
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 5.1e-302 1041.2 907 58.9
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 1.5e-301 1039.6 956 58.8
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 2.5e-301 1038.9 957 57.6
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 2.1e-300 1035.8 901 59.8
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 1.4e-299 1033.1 968 55.6
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 1.8e-299 1032.7 901 58.5
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 2.0e-298 1029.2 949 56.2
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 2.6e-298 1028.9 906 56.5
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 3.4e-298 1028.5 906 56.6
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 4.4e-298 1028.1 936 56.4
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 4.4e-298 1028.1 970 55.4
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 5.8e-298 1027.7 968 55.4
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 9.9e-298 1026.9 962 55.9
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 2.2e-297 1025.8 965 55.5
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 2.2e-297 1025.8 965 55.5
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 4.9e-297 1024.6 944 56.0
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 1.1e-296 1023.5 949 56.8
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 4.1e-296 1021.5 965 54.5
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 1.6e-295 1019.6 966 55.2
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 1.2e-292 1010.0 778 65.9
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 1.2e-292 1010.0 923 57.6
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 1.1e-291 1006.9 902 58.6
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 6.8e-291 1004.2 922 57.7
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 1.5e-290 1003.0 903 57.3
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 1.2e-279 966.8 961 54.3
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 7.9e-279 964.1 725 66.2
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 2.6e-274 949.1 827 60.9
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 4.9e-273 944.9 862 58.5
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 4.6e-271 938.3 921 52.1
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 6.0e-271 937.9 825 58.2
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 9.6e-269 930.6 807 59.5
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 1.7e-265 919.8 885 52.3
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 1.8e-262 909.8 990 52.4
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 6.7e-262 907.9 882 56.6
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 1.1e-259 900.6 783 58.6
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 6.9e-259 897.9 925 50.9
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 1.0e-254 884.0 789 59.4
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 3.1e-227 792.7 945 44.0
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 4.5e-226 788.9 961 45.1
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 3.2e-224 782.7 905 44.3
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 9.8e-205 718.0 830 45.2
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 9.2e-195 684.9 894 45.2
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 1.5e-192 677.6 508 67.7
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 2.5e-176 623.6 686 45.0
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 2.4e-163 580.5 565 55.6
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 7.6e-149 532.3 594 50.2
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 6.0e-146 522.7 912 35.9
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 1.4e-139 501.5 861 36.2
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.8e-126 458.0 399 57.9
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 4.4e-120 436.8 298 72.5
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.2e-112 412.1 297 69.4
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 8.8e-105 386.0 402 53.5
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 3.8e-92 344.0 244 66.0
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.9e-91 341.7 199 77.4
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 5.6e-91 340.1 188 81.9
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 3.6e-90 337.4 186 82.3
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 3.5e-77 294.3 228 60.1
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 5.0e-76 290.4 225 61.8
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 1.5e-64 252.3 516 31.4
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 2.2e-63 248.4 191 58.6
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 2.3e-44 185.3 147 57.1
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 1.8e-36 159.1 131 52.7
Oeu028617.1 Olea europaea HOM05D004330 ORTHO05D005182 5.8e-32 144.1 95 82.1
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 2.3e-28 132.1 173 46.2
Oeu019037.1 Olea europaea HOM05D024142 ORTHO05D005182 1.5e-27 129.4 82 82.9
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 2.2e-26 125.6 159 42.8
Oeu058856.1 Olea europaea HOM05D024142 ORTHO05D005182 6.3e-26 124.0 82 79.3
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.0e-12 80.1 52 78.8
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 6.7e-12 77.4 169 33.1
Oeu051633.1 Olea europaea HOM05D024142 ORTHO05D292675 2.0e-11 75.9 83 54.2
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 5.7e-11 74.3 106 39.6
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 2.8e-10 72.0 93 44.1
Oeu054836.1 Olea europaea HOM05D024142 ORTHO05D290771 2.4e-09 68.9 69 58.0


User provided reference genes

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