Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011014.1 Olea europaea HOM05D004345 ORTHO05D005192 1.3e-79 299.7 150 100.0
Oeu028553.1 Olea europaea HOM05D004345 ORTHO05D005192 1.9e-75 285.8 150 94.7
MSTRG.24391 Avicennia marina HOM05D004345 ORTHO05D005192 7.6e-32 141.0 148 52.7
Migut.N02797 Erythranthe guttata HOM05D004345 ORTHO05D005192 8.7e-28 127.5 149 47.0
SalBow3G2318 Salvia bowleyana HOM05D004345 ORTHO05D005192 1.4e-25 120.2 149 49.7
Cc07_g15690 Coffea canephora HOM05D004345 ORTHO05D005192 1.4e-22 110.2 152 42.8
Solyc01g098450.4 Solanum lycopersicum HOM05D004345 ORTHO05D005192 2.5e-19 99.4 144 41.7
Sopen01g042020 Solanum pennellii HOM05D004345 ORTHO05D005192 9.7e-19 97.4 144 41.0
PGSC0003DMG403028564 Solanum tuberosum HOM05D004345 ORTHO05D005192 1.1e-17 94.0 144 40.3
Peaxi162Scf00434g00066 Petunia axillaris HOM05D004345 ORTHO05D005192 1.4e-17 93.6 144 39.6
unitig_744.g24116 Utricularia gibba HOM05D004345 ORTHO05D005192 1.4e-17 93.6 132 43.9
Nitab4.5_0008354g0010 Nicotiana tabacum HOM05D004345 ORTHO05D005192 3.1e-17 92.4 143 42.0
Nn1g01729 Nelumbo nucifera HOM05D004345 ORTHO05D005192 4.1e-17 92.0 166 34.3
Prupe.2G050600 Prunus persica HOM05D004345 ORTHO05D005192 2.0e-16 89.7 148 39.9
QL09p016785 Quercus lobata HOM05D004345 ORTHO05D005192 2.6e-16 89.4 149 37.6
Actinidia34666 Actinidia chinensis HOM05D004345 ORTHO05D005192 7.6e-16 87.8 128 39.1
Ciclev10000213m.g Citrus clementina HOM05D004345 ORTHO05D005192 2.5e-14 82.8 146 38.4
QL07p000534 Quercus lobata HOM05D004345 ORTHO05D005192 3.2e-14 82.4 149 34.2
Gohir.A11G329500 Gossypium hirsutum HOM05D004345 ORTHO05D005192 4.2e-14 82.0 140 36.4
CSS0030547 Camellia sinensis var. sinensis HOM05D004345 ORTHO05D005192 2.1e-13 79.7 128 40.6
Gohir.D11G348700 Gossypium hirsutum HOM05D004345 ORTHO05D005192 2.1e-13 79.7 140 36.4
MD04G1026400 Malus domestica HOM05D004345 ORTHO05D005192 2.1e-13 79.7 141 39.7
RcHm_v2.0_Chr7g0216331 Rosa chinensis HOM05D004345 ORTHO05D005192 2.1e-13 79.7 150 36.7
CiPaw.16G081600 Carya illinoinensis HOM05D004345 ORTHO05D005192 2.7e-13 79.3 149 35.6
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 2.7e-13 79.3 150 36.7
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 2.7e-13 79.3 142 36.6
CiPaw.12G040000 Carya illinoinensis HOM05D004345 ORTHO05D005192 4.6e-13 78.6 149 32.9
Aqoxy4G03088 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 1.4e-12 77.0 149 34.2
FAN18G0597 Fragaria x ananassa HOM05D004345 ORTHO05D005192 1.4e-12 77.0 148 35.1
Lalb_Chr21g0307461 Lupinus albus HOM05D004345 ORTHO05D005192 3.0e-12 75.9 149 33.6
Nitab4.5_0001423g0010 Nicotiana tabacum HOM05D004345 ORTHO05D005192 3.9e-12 75.5 149 35.6
Rhsim12G0029000 Rhododendron simsii HOM05D004345 ORTHO05D005192 3.9e-12 75.5 113 44.2
TWI31G0574 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 3.9e-12 75.5 148 34.5
COL.COLO4_14552 Corchorus olitorius HOM05D004345 ORTHO05D005192 5.1e-12 75.1 144 36.8
Gorai.007G379000 Gossypium raimondii HOM05D004345 ORTHO05D005192 5.1e-12 75.1 140 35.0
CiPaw.12G046900 Carya illinoinensis HOM05D004345 ORTHO05D005192 6.7e-12 74.7 146 33.6
Cfa020657 Carpinus fangiana HOM05D004345 ORTHO05D005192 8.8e-12 74.3 164 32.9
vmacro01076 Vaccinium macrocarpon HOM05D004345 ORTHO05D005192 8.8e-12 74.3 107 44.9
FvH4_5g25850 Fragaria vesca HOM05D004345 ORTHO05D005192 1.1e-11 73.9 148 34.5
TPR.G10330 Trifolium pratense HOM05D004345 ORTHO05D005192 1.1e-11 73.9 141 36.2
Lsat_1_v5_gn_8_70480 Lactuca sativa HOM05D004345 ORTHO05D005192 1.5e-11 73.6 150 30.7
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 1.5e-11 73.6 150 36.0
TWI60G1145 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 1.5e-11 73.6 152 36.8
QL04p019450 Quercus lobata HOM05D004345 ORTHO05D005192 1.9e-11 73.2 126 34.9
Glyma.10G030100 Glycine max HOM05D004345 ORTHO05D005192 3.3e-11 72.4 146 35.6
Dinv35989 Davidia involucrata HOM05D004345 ORTHO05D004155 4.3e-11 72.0 129 35.7
Cpa.g.sc3060.1 Carica papaya HOM05D004345 ORTHO05D005192 9.7e-11 70.9 151 31.8
Cpa.g.sc4881.1 Carica papaya HOM05D004345 ORTHO05D005192 9.7e-11 70.9 151 31.8
FAN04G0730 Fragaria x ananassa HOM05D004345 ORTHO05D005192 9.7e-11 70.9 150 35.3
Lj5g0026700 Lotus japonicus HOM05D004345 ORTHO05D005192 9.7e-11 70.9 141 36.2
Manes.14G172500 Manihot esculenta HOM05D004345 ORTHO05D005192 1.3e-10 70.5 149 35.6
Dinv36001 Davidia involucrata HOM05D004345 ORTHO05D005192 2.2e-10 69.7 107 39.3
Ca_09724_v3 Cicer arietinum L. HOM05D004345 ORTHO05D005192 3.7e-10 68.9 139 34.5
FAN13G0999 Fragaria x ananassa HOM05D004345 ORTHO05D005192 4.8e-10 68.6 148 33.1
Glyma.02G144000 Glycine max HOM05D004345 ORTHO05D005192 6.3e-10 68.2 146 34.2
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 8.2e-10 67.8 137 33.6
Eucgr.K02289 Eucalyptus grandis HOM05D004345 ORTHO05D005192 8.2e-10 67.8 154 32.5
VMungo1127G1998 Vigna mungo HOM05D004345 ORTHO05D005192 8.2e-10 67.8 136 34.6
RcHm_v2.0_Chr6g0264731 Rosa chinensis HOM05D004345 ORTHO05D005192 2.4e-09 66.2 142 33.8
VMungo1215G1527 Vigna mungo HOM05D004345 ORTHO05D005192 3.1e-09 65.9 136 36.8
MBI07_g37626_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 4.1e-09 65.5 84 41.7
MELO3C021732.2 Cucumis melo HOM05D004345 ORTHO05D005192 1.2e-08 63.9 137 31.4
Psat5g128760 Pisum sativum HOM05D004345 ORTHO05D005192 3.4e-08 62.4 141 32.6
MBI07_g11743_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 5.9e-08 61.6 79 41.8
Nitab4.5_0001903g0100 Nicotiana tabacum HOM05D004345 ORTHO05D005192 7.7e-08 61.2 113 38.9
PSO210G0382 Papaver somniferum HOM05D004345 ORTHO05D005192 7.7e-08 61.2 134 35.8
PSO210G0907 Papaver somniferum HOM05D004345 ORTHO05D005192 1.3e-07 60.5 145 33.8
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 8.5e-07 57.8 144 32.6
Eucgr.C04176 Eucalyptus grandis HOM05D004345 ORTHO05D005192 8.5e-07 57.8 146 26.0
Sc14g0004510 Simmondsia chinensis HOM05D004345 ORTHO05D005192 8.5e-07 57.8 117 30.8
CDE04G1779 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 1.9e-06 56.6 103 31.1
PSO407G0063 Papaver somniferum HOM05D004345 ORTHO05D005192 2.5e-06 56.2 145 33.1
Medtr3g069120 Medicago truncatula HOM05D004345 ORTHO05D005192 5.5e-06 55.1 129 31.0


User provided reference genes

Program Settings